Literature DB >> 24120391

Genetic variations in VDR associated with prostate cancer risk and progression in a Korean population.

Jong Jin Oh1, Seok-Soo Byun, Sang Eun Lee, Sung Kyu Hong, Chang Wook Jeong, Dokyoon Kim, Hae Jong Kim, Soon Chul Myung.   

Abstract

Low levels of vitamin D are implicated as a potential risk factor for prostate cancer, and the vitamin D receptor (VDR) gene may be important in the onset and progression of prostate cancer. In this study, sequence variants in the VDR gene were investigated in a Korean study cohort to determine whether they are associated with prostate cancer risk. We evaluated the association between 47 single nucleotide polymorphisms (SNPs) in the VDR gene and prostate cancer risk as well as clinical characteristics (prostate-specific antigen level, clinical stage, pathological stage and Gleason score) in Korean men (272 prostate cancer patients and 173 benign prostatic hyperplasia patient who underwent a prostate biopsy, which was negative for malignancy) using unconditional logistic regression. The statistical analysis suggested that two VDR sequence variants (rs2408876 and rs2239182) had a significant association with prostate cancer risk (odds ratio [OR]. 1.41; p=0.03; OR, 0.73; p=0.05, respectively). Logistic analyses of the VDR polymorphisms with several prostate cancer related factors showed that several SNPs were significant; nine SNPs to PSA level, three to clinical stage, two to pathological stage, and three SNPs to the Gleason score. The results suggest that some VDR gene polymorphisms in Korean men might not only be associated with prostate cancer risk but also significantly related to prostate cancer-related risk factors such as PSA level, tumor stage, and Gleason score. However, current limitation for small cohort with not-healthy control group might have false positive effects; therefore it should be overcome via further large-scale validating studies.
© 2013 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  BPH; FDR; GWAS; HWE; Hardy–Weinberg equilibrium; LD; MAF; OR; PCR; PSA; Polymorphism; Prostate cancer; SNP; SpD; TURP; VDR; Vitamin D receptor; benign prostate hyperplasia; false discovery rate; genome-wide association studies; linkage disequilibrium; minor allele frequency; odds ratio; polymerase chain reaction; prostate-specific antigen; single nucleotide polymorphism; spectral decomposition; transurethral resection of the prostate; vitamin D receptor

Mesh:

Substances:

Year:  2013        PMID: 24120391     DOI: 10.1016/j.gene.2013.09.119

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  12 in total

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Review 2.  Polygenic risk score for genetic evaluation of prostate cancer risk in Asian populations: A narrative review.

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Journal:  Investig Clin Urol       Date:  2021-05

3.  Association between single nucleotide polymorphism of vitamin D receptor gene FokI polymorphism and clinical progress of benign prostatic hyperplasia.

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5.  Role of vitamin D receptor gene Cdx2 and Apa1 polymorphisms in prostate cancer susceptibility: a meta-analysis.

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Journal:  BMC Cancer       Date:  2016-08-23       Impact factor: 4.430

6.  A genetic variant in SLC28A3, rs56350726, is associated with progression to castration-resistant prostate cancer in a Korean population with metastatic prostate cancer.

Authors:  Jung Ki Jo; Jong Jin Oh; Yong Tae Kim; Hong Sang Moon; Hong Yong Choi; Seunghyun Park; Jin-Nyoung Ho; Sungroh Yoon; Hae Young Park; Seok-Soo Byun
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7.  Association of Vitamin D receptor Fok I polymorphism with the risk of prostate cancer: a meta-analysis.

Authors:  Shaosan Kang; Yansheng Zhao; Jian Liu; Lei Wang; Geng Zhao; Xi Chen; Anliang Yao; Liguo Zhang; Xiaojun Zhang; Xiaoqiang Li
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8.  Vitamin D receptor Taq I polymorphism and the risk of prostate cancer: a meta-analysis.

Authors:  Shaosan Kang; Yansheng Zhao; Lei Wang; Jian Liu; Xi Chen; Xiaofeng Liu; Zhijie Shi; Weixing Gao; Fenghong Cao
Journal:  Oncotarget       Date:  2017-12-22

9.  Lack of association between the risk of prostate cancer and vitamin D receptor Bsm I polymorphism: a meta-analysis of 27 published studies.

Authors:  Shaosan Kang; Yansheng Zhao; Lei Wang; Jian Liu; Xi Chen; Xiaofeng Liu; Zhijie Shi; Weixing Gao; Fenghong Cao
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10.  Association of a Missense ALDH2 Single Nucleotide Polymorphism (Glu504Lys) With Benign Prostate Hyperplasia in a Korean Population.

Authors:  Hosik Seok; Koo Han Yoo; Young Ock Kim; Joo-Ho Chung
Journal:  Int Neurourol J       Date:  2013-12-31       Impact factor: 2.835

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