Literature DB >> 24113842

TDP-43 regulates the microprocessor complex activity during in vitro neuronal differentiation.

Valerio Di Carlo1, Elena Grossi, Pietro Laneve, Mariangela Morlando, Stefano Dini Modigliani, Monica Ballarino, Irene Bozzoni, Elisa Caffarelli.   

Abstract

TDP-43 (TAR DNA-binding protein 43) is an RNA-binding protein implicated in RNA metabolism at several levels. Even if ubiquitously expressed, it is considered as a neuronal activity-responsive factor and a major signature for neurological pathologies, making the comprehension of its activity in the nervous system a very challenging issue. TDP-43 has also been described as an accessory component of the Drosha-DGCR8 (DiGeorge syndrome critical region gene 8) microprocessor complex, which is crucially involved in basal and tissue-specific RNA processing events. In the present study, we exploited in vitro neuronal differentiation systems to investigate the TDP-43 demand for the microprocessor function, focusing on both its canonical microRNA biosynthetic activity and its alternative role as a post-transcriptional regulator of gene expression. Our findings reveal a novel role for TDP-43 as an essential factor that controls the stability of Drosha protein during neuronal differentiation, thus globally affecting the production of microRNAs. We also demonstrate that TDP-43 is required for the Drosha-mediated regulation of Neurogenin 2, a master gene orchestrating neurogenesis, whereas post-transcriptional control of Dgcr8, another Drosha target, resulted to be TDP-43-independent. These results implicate a previously uncovered contribution of TDP-43 in regulating the abundance and the substrate specificity of the microprocessor complex and provide new insights into TDP-43 as a key player in neuronal differentiation.

Entities:  

Mesh:

Substances:

Year:  2013        PMID: 24113842     DOI: 10.1007/s12035-013-8564-x

Source DB:  PubMed          Journal:  Mol Neurobiol        ISSN: 0893-7648            Impact factor:   5.590


  43 in total

Review 1.  Roles of small regulatory RNAs in determining neuronal identity.

Authors:  Xuekun Li; Peng Jin
Journal:  Nat Rev Neurosci       Date:  2010-03-31       Impact factor: 34.870

2.  Design and cloning of lentiviral vectors expressing small interfering RNAs.

Authors:  Gustavo Tiscornia; Oded Singer; Inder M Verma
Journal:  Nat Protoc       Date:  2006       Impact factor: 13.491

3.  p53 cellular localization and function in neuroblastoma: evidence for defective G(1) arrest despite WAF1 induction in MYCN-amplified cells.

Authors:  D A Tweddle; A J Malcolm; M Cole; A D Pearson; J Lunec
Journal:  Am J Pathol       Date:  2001-06       Impact factor: 4.307

4.  TDP-43 promotes microRNA biogenesis as a component of the Drosha and Dicer complexes.

Authors:  Yukio Kawahara; Ai Mieda-Sato
Journal:  Proc Natl Acad Sci U S A       Date:  2012-02-09       Impact factor: 11.205

5.  Loss of TDP-43 causes age-dependent progressive motor neuron degeneration.

Authors:  Yohei Iguchi; Masahisa Katsuno; Jun-ichi Niwa; Shinnosuke Takagi; Shinsuke Ishigaki; Kensuke Ikenaka; Kaori Kawai; Hirohisa Watanabe; Koji Yamanaka; Ryosuke Takahashi; Hidemi Misawa; Shoichi Sasaki; Fumiaki Tanaka; Gen Sobue
Journal:  Brain       Date:  2013-02-28       Impact factor: 13.501

6.  The interplay between microRNAs and the neurotrophin receptor tropomyosin-related kinase C controls proliferation of human neuroblastoma cells.

Authors:  Pietro Laneve; Lucia Di Marcotullio; Ubaldo Gioia; Micol E Fiori; Elisabetta Ferretti; Alberto Gulino; Irene Bozzoni; Elisa Caffarelli
Journal:  Proc Natl Acad Sci U S A       Date:  2007-05-01       Impact factor: 11.205

7.  Differential expression of neuroD in primary cultures of cerebral cortical neurons.

Authors:  M Katayama; I Mizuta; Y Sakoyama; A Kohyama-Koganeya; K Akagawa; K Uyemura; K Ishii
Journal:  Exp Cell Res       Date:  1997-11-01       Impact factor: 3.905

Review 8.  MYCN in neuronal tumours.

Authors:  Manfred Schwab
Journal:  Cancer Lett       Date:  2004-02-20       Impact factor: 8.679

9.  Knockdown of transactive response DNA-binding protein (TDP-43) downregulates histone deacetylase 6.

Authors:  Fabienne C Fiesel; Aaron Voigt; Stephanie S Weber; Chris Van den Haute; Andrea Waldenmaier; Karin Görner; Michael Walter; Marlene L Anderson; Jeannine V Kern; Tobias M Rasse; Thorsten Schmidt; Wolfdieter Springer; Roland Kirchner; Michael Bonin; Manuela Neumann; Veerle Baekelandt; Marianna Alunni-Fabbroni; Jörg B Schulz; Philipp J Kahle
Journal:  EMBO J       Date:  2009-11-12       Impact factor: 11.598

10.  TDP-43 regulates Drosophila neuromuscular junctions growth by modulating Futsch/MAP1B levels and synaptic microtubules organization.

Authors:  Vinay K Godena; Giulia Romano; Maurizio Romano; Chiara Appocher; Raffaella Klima; Emanuele Buratti; Francisco E Baralle; Fabian Feiguin
Journal:  PLoS One       Date:  2011-03-11       Impact factor: 3.240

View more
  32 in total

Review 1.  Regulation of microRNA biogenesis.

Authors:  Minju Ha; V Narry Kim
Journal:  Nat Rev Mol Cell Biol       Date:  2014-07-16       Impact factor: 94.444

Review 2.  Dgcr8 knockout approaches to understand microRNA functions in vitro and in vivo.

Authors:  Wen-Ting Guo; Yangming Wang
Journal:  Cell Mol Life Sci       Date:  2019-01-29       Impact factor: 9.261

3.  Identification of linc-NeD125, a novel long non coding RNA that hosts miR-125b-1 and negatively controls proliferation of human neuroblastoma cells.

Authors:  Valeria Bevilacqua; Ubaldo Gioia; Valerio Di Carlo; Anna F Tortorelli; Teresa Colombo; Irene Bozzoni; Pietro Laneve; Elisa Caffarelli
Journal:  RNA Biol       Date:  2015       Impact factor: 4.652

4.  Emerging roles of DROSHA beyond primary microRNA processing.

Authors:  Dooyoung Lee; Chanseok Shin
Journal:  RNA Biol       Date:  2017-12-12       Impact factor: 4.652

5.  G-Quadruplexes influence pri-microRNA processing.

Authors:  Samuel G Rouleau; Jean-Michel Garant; François Bolduc; Martin Bisaillon; Jean-Pierre Perreault
Journal:  RNA Biol       Date:  2017-12-11       Impact factor: 4.652

6.  MicroRNA-independent functions of DGCR8 are essential for neocortical development and TBR1 expression.

Authors:  Federica Marinaro; Matteo J Marzi; Nadin Hoffmann; Hayder Amin; Roberta Pelizzoli; Francesco Niola; Francesco Nicassio; Davide De Pietri Tonelli
Journal:  EMBO Rep       Date:  2017-02-23       Impact factor: 8.807

7.  Mir-23a and mir-125b regulate neural stem/progenitor cell proliferation by targeting Musashi1.

Authors:  Ubaldo Gioia; Valerio Di Carlo; Pasquale Caramanica; Camilla Toselli; Antonella Cinquino; Marcella Marchioni; Pietro Laneve; Stefano Biagioni; Irene Bozzoni; Emanuele Cacci; Elisa Caffarelli
Journal:  RNA Biol       Date:  2014       Impact factor: 4.652

Review 8.  RNA-binding proteins implicated in neurodegenerative diseases.

Authors:  Mark R Cookson
Journal:  Wiley Interdiscip Rev RNA       Date:  2016-09-23       Impact factor: 9.957

9.  Atomic-level evidence for packing and positional amyloid polymorphism by segment from TDP-43 RRM2.

Authors:  Elizabeth L Guenther; Peng Ge; Hamilton Trinh; Michael R Sawaya; Duilio Cascio; David R Boyer; Tamir Gonen; Z Hong Zhou; David S Eisenberg
Journal:  Nat Struct Mol Biol       Date:  2018-03-12       Impact factor: 15.369

Review 10.  Protein Aggregation in the Pathogenesis of Ischemic Stroke.

Authors:  Shusheng Wu; Longfei Du
Journal:  Cell Mol Neurobiol       Date:  2020-06-11       Impact factor: 5.046

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.