Literature DB >> 24110994

Modeling spatial population dynamics of stem cell lineage in wound healing and cancerogenesis.

Youfang Cao, Hammad Naveed, Claire Liang, Jie Liang.   

Abstract

Modeling the dynamics of cell population in tissues involving stem cell niches allows insight into the control mechanisms of the important wound healing process. It is well known that growth and divisions of stem cells are mainly repressed by niche cells, but can also be activated by signals released from wound. In addition, the proliferation and differentiation among three different types of cell: stem cells (SCs), intermediate progenitor cells (IPCs), and fully differentiated cells (FDCs) in stem cell lineage are under different activation and inhibition controls. We have developed a novel stochastic spatial dynamic model of cells. We can characterize not only overall cell population dynamics, but also details of temporal-spatial relationship of individual cells within a tissue. In our model, the shape, growth, and division of each cell are modeled using a realistic geometric model. Furthermore, the inhibited growth rate, proliferation and differentiation probabilities of individual cells are modeled through feedback loops controlled by secreted factors and wound signals from neighboring cells. With specific proliferation and differentiation probabilities, the actual division type that each cell will take is chosen by a Monte Carlo sampling process. With simulations, we study the effects of different strengths of wound signals to wound healing behaviors. We also study the correlations between chronic wound and cancerogenesis.

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Year:  2013        PMID: 24110994      PMCID: PMC4148915          DOI: 10.1109/EMBC.2013.6610807

Source DB:  PubMed          Journal:  Conf Proc IEEE Eng Med Biol Soc        ISSN: 1557-170X


  17 in total

Review 1.  Cutaneous wound healing.

Authors:  A J Singer; R A Clark
Journal:  N Engl J Med       Date:  1999-09-02       Impact factor: 91.245

Review 2.  The cell biology of neurogenesis.

Authors:  Magdalena Götz; Wieland B Huttner
Journal:  Nat Rev Mol Cell Biol       Date:  2005-10       Impact factor: 94.444

3.  Geometric order in proliferating epithelia: impact of rearrangements and cleavage plane orientation.

Authors:  Hammad Naveed; Yinzi Li; Sema Kachalo; Jie Liang
Journal:  Annu Int Conf IEEE Eng Med Biol Soc       Date:  2010

Review 4.  Asymmetry of stem cell fate and the potential impact of the niche: observations, simulations, and interpretations.

Authors:  Ingo Roeder; Ronny Lorenz
Journal:  Stem Cell Rev       Date:  2006       Impact factor: 5.739

5.  Hematopoietic stem cells reversibly switch from dormancy to self-renewal during homeostasis and repair.

Authors:  Anne Wilson; Elisa Laurenti; Gabriela Oser; Richard C van der Wath; William Blanco-Bose; Maike Jaworski; Sandra Offner; Cyrille F Dunant; Leonid Eshkind; Ernesto Bockamp; Pietro Lió; H Robson Macdonald; Andreas Trumpp
Journal:  Cell       Date:  2008-12-12       Impact factor: 41.582

6.  Feedback regulation in multistage cell lineages.

Authors:  Wing-Cheong Lo; Ching-Shan Chou; Kimberly K Gokoffski; Frederic Y-M Wan; Arthur D Lander; Anne L Calof; Qing Nie
Journal:  Math Biosci Eng       Date:  2009-01       Impact factor: 2.080

7.  Integrative multicellular biological modeling: a case study of 3D epidermal development using GPU algorithms.

Authors:  Scott Christley; Briana Lee; Xing Dai; Qing Nie
Journal:  BMC Syst Biol       Date:  2010-08-09

8.  A mathematical model of wound healing and subsequent scarring.

Authors:  B D Cumming; D L S McElwain; Z Upton
Journal:  J R Soc Interface       Date:  2009-03-25       Impact factor: 4.118

9.  A mathematical model of ischemic cutaneous wounds.

Authors:  Chuan Xue; Avner Friedman; Chandan K Sen
Journal:  Proc Natl Acad Sci U S A       Date:  2009-09-21       Impact factor: 11.205

10.  Cell lineages and the logic of proliferative control.

Authors:  Arthur D Lander; Kimberly K Gokoffski; Frederic Y M Wan; Qing Nie; Anne L Calof
Journal:  PLoS Biol       Date:  2009-01-20       Impact factor: 8.029

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  3 in total

1.  Effects of mechanical properties on tumor invasion: insights from a cellular model.

Authors:  Hammad Naveed; Lisa X Xu
Journal:  Conf Proc IEEE Eng Med Biol Soc       Date:  2014

2.  Mechanical model of geometric cell and topological algorithm for cell dynamics from single-cell to formation of monolayered tissues with pattern.

Authors:  Sëma Kachalo; Hammad Naveed; Youfang Cao; Jieling Zhao; Jie Liang
Journal:  PLoS One       Date:  2015-05-14       Impact factor: 3.240

3.  Role of the Interplay Between the Internal and External Conditions in Invasive Behavior of Tumors.

Authors:  Youness Azimzade; Abbas Ali Saberi; Muhammad Sahimi
Journal:  Sci Rep       Date:  2018-04-13       Impact factor: 4.379

  3 in total

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