Literature DB >> 24110991

Cellular automaton model for simulating tissue-specific intestinal electrophysiological activity.

Jerry Gao, Peng Du, Greg O'Grady, Rosalind Archer, Simon J Gibbons, Gianrico Farrugia, Leo K Cheng.   

Abstract

Depletion of interstitial cell of Cajal (ICC) networks is known to occur in various gastrointestinal (GI) motility disorders. Although techniques for quantifying the structure of ICC networks are available, the ICC network structure-function relationships are yet to be well elucidated. Existing methods of relating ICC structure to function are computationally expensive, and it is difficult to up-scale them to larger multiscale simulations. A new cellular automaton model for simulating tissue-specific slow wave propagation was developed, and in preliminary studies the automaton model was applied on jejunal ICC network structures from wild-type and 5-HT2B receptor knockout (ICC depleted) mice. Two metrics were also developed to quantify the simulated propagation patterns: 1) ICC and 2) non-ICC activation lag metrics. These metrics measured the average delay in time taken for the slow wave to propagate across the ICC and non-ICC domain throughout the entire network compared to the theoretical fastest propagation, respectively. Slow wave propagation was successfully simulated across the ICC networks with greatly reduced computational time compared to previous methods, and the propagation pattern metrics quantitatively revealed an impaired propagation during ICC depletion. In conclusion, the developed slow wave propagation model and propagation pattern metrics offer a computationally efficient framework for relating ICC structure to function. These tools can now be further applied to define ICC structure-function relationships across various spatial and temporal scales.

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Year:  2013        PMID: 24110991      PMCID: PMC4058553          DOI: 10.1109/EMBC.2013.6610804

Source DB:  PubMed          Journal:  Conf Proc IEEE Eng Med Biol Soc        ISSN: 1557-170X


  17 in total

Review 1.  Intercellular coupling of interstitial cells of cajal in the digestive tract.

Authors:  Menachem Hanani; Gianrico Farrugia; Terumasa Komuro
Journal:  Int Rev Cytol       Date:  2005

2.  Quantitative cellular description of gastric slow wave activity.

Authors:  Alberto Corrias; Martin L Buist
Journal:  Am J Physiol Gastrointest Liver Physiol       Date:  2008-02-14       Impact factor: 4.052

Review 3.  Generation and propagation of gastric slow waves.

Authors:  Dirk F van Helden; Derek R Laver; John Holdsworth; Mohammad S Imtiaz
Journal:  Clin Exp Pharmacol Physiol       Date:  2009-11-23       Impact factor: 2.557

4.  Spatiotemporal electrical and motility mapping of distension-induced propagating oscillations in the murine small intestine.

Authors:  T C Seerden; W J E P Lammers; B Y De Winter; J G De Man; P A Pelckmans
Journal:  Am J Physiol Gastrointest Liver Physiol       Date:  2005-08-11       Impact factor: 4.052

5.  Slow wave propagation and plasticity of interstitial cells of Cajal in the small intestine of diabetic rats.

Authors:  Wim J E P Lammers; H M Al-Bloushi; S A Al-Eisaei; F A Al-Dhaheri; B Stephen; R John; S Dhanasekaran; S M Karam
Journal:  Exp Physiol       Date:  2011-07-08       Impact factor: 2.969

6.  Lack of serotonin 5-HT2B receptor alters proliferation and network volume of interstitial cells of Cajal in vivo.

Authors:  V S Tharayil; M M Wouters; J E Stanich; J L Roeder; S Lei; A Beyder; P J Gomez-Pinilla; M D Gershon; L Maroteaux; S J Gibbons; G Farrugia
Journal:  Neurogastroenterol Motil       Date:  2009-11-26       Impact factor: 3.598

7.  The effect of duodenal and mid small bowel transection on the frequency gradient of the pacesetter potential in the canine small intestine.

Authors:  C F Code; J H Szurszewski
Journal:  J Physiol       Date:  1970-04       Impact factor: 5.182

8.  A tissue framework for simulating the effects of gastric electrical stimulation and in vivo validation.

Authors:  Peng Du; Greg O'Grady; John A Windsor; Leo K Cheng; Andrew J Pullan
Journal:  IEEE Trans Biomed Eng       Date:  2009-07-28       Impact factor: 4.538

9.  W/kit gene required for interstitial cells of Cajal and for intestinal pacemaker activity.

Authors:  J D Huizinga; L Thuneberg; M Klüppel; J Malysz; H B Mikkelsen; A Bernstein
Journal:  Nature       Date:  1995-01-26       Impact factor: 49.962

10.  Biophysically based modeling of the interstitial cells of cajal: current status and future perspectives.

Authors:  Rachel Lees-Green; Peng Du; Gregory O'Grady; Arthur Beyder; Gianrico Farrugia; Andrew J Pullan
Journal:  Front Physiol       Date:  2011-07-04       Impact factor: 4.566

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  3 in total

1.  Spatial Noise in Coupling Strength and Natural Frequency within a Pacemaker Network; Consequences for Development of Intestinal Motor Patterns According to a Weakly Coupled Phase Oscillator Model.

Authors:  Sean P Parsons; Jan D Huizinga
Journal:  Front Neurosci       Date:  2016-02-04       Impact factor: 4.677

2.  Role of stem cell growth factor/c-Kit in the pathogenesis of irritable bowel syndrome.

Authors:  Yuna Chai; Yusheng Huang; Hongmei Tang; Xing Tu; Jianbo He; Ting Wang; Qingye Zhang; Fen Xiong; Detang Li; Zhenwen Qiu
Journal:  Exp Ther Med       Date:  2017-02-20       Impact factor: 2.447

Review 3.  Current applications of mathematical models of the interstitial cells of Cajal in the gastrointestinal tract.

Authors:  Sue Ann Mah; Recep Avci; Leo K Cheng; Peng Du
Journal:  WIREs Mech Dis       Date:  2020-10-07
  3 in total

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