| Literature DB >> 24109331 |
Asmund Kaupang1, Carl Henrik Görbitz, Tore Bonge-Hansen.
Abstract
The asymmetric unit of the title compound, C8H10N6O2, contains one-half mol-ecule, which is completed by a crystallographic center of symmetry. The piperazine ring adopts a chair conformation. In the crystal, weak C-H⋯O inter-actions link the mol-ecules into layers parallel to the bc plane. The crystal packing also exhibits short N⋯N contacts of 3.0467 (16) Å between the terminal diazo N atoms from neighbouring mol-ecules.Entities:
Year: 2013 PMID: 24109331 PMCID: PMC3793744 DOI: 10.1107/S1600536813018801
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C8H10N6O2 | |
| Monoclinic, | Melting point: 382 K |
| Hall symbol: -P 2ybc | Mo |
| Cell parameters from 1727 reflections | |
| θ = 2.7–28.7° | |
| µ = 0.12 mm−1 | |
| β = 94.453 (2)° | |
| Needle, yellow | |
| 1.4 × 0.2 × 0.2 mm |
| Bruker APEXII CCD diffractometer | 1190 independent reflections |
| Radiation source: fine-focus sealed tube | 1013 reflections with |
| Graphite monochromator | |
| Detector resolution: 8.3 pixels mm-1 | θmax = 28.7°, θmin = 2.7° |
| Sets of exposures each taken over 0.5° ω rotation scans | |
| Absorption correction: multi-scan ( | |
| 4255 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 1190 reflections | (Δ/σ)max < 0.001 |
| 82 parameters | Δρmax = 0.30 e Å−3 |
| 3 restraints | Δρmin = −0.22 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.1936 (3) | 0.09488 (12) | 0.31650 (8) | 0.0164 (2) | |
| C2 | 0.2433 (3) | −0.01250 (13) | 0.23807 (8) | 0.0206 (3) | |
| H21 | 0.165 (3) | −0.1064 (14) | 0.2306 (11) | 0.025* | |
| C3 | −0.0658 (3) | −0.10152 (12) | 0.41721 (8) | 0.0168 (2) | |
| H31 | 0.016 (3) | −0.1708 (14) | 0.3686 (10) | 0.020* | |
| H32 | −0.308 (3) | −0.1005 (15) | 0.4067 (10) | 0.020* | |
| C4 | −0.0370 (3) | 0.15403 (11) | 0.47597 (8) | 0.0169 (2) | |
| H41 | −0.2791 | 0.1688 | 0.4685 | 0.020* | |
| H42 | 0.0701 | 0.2495 | 0.4638 | 0.020* | |
| N1 | 0.0575 (2) | 0.04673 (10) | 0.40139 (7) | 0.0165 (2) | |
| N2 | 0.4038 (2) | 0.03769 (10) | 0.16317 (7) | 0.0208 (2) | |
| N3 | 0.5432 (3) | 0.08327 (13) | 0.10006 (8) | 0.0295 (3) | |
| O1 | 0.2787 (2) | 0.22436 (9) | 0.30680 (6) | 0.0208 (2) |
| C1 | 0.0158 (5) | 0.0172 (5) | 0.0158 (5) | 0.0018 (4) | −0.0009 (4) | 0.0016 (4) |
| C2 | 0.0285 (6) | 0.0176 (5) | 0.0162 (5) | −0.0020 (4) | 0.0047 (4) | 0.0010 (4) |
| C3 | 0.0204 (5) | 0.0141 (5) | 0.0162 (5) | −0.0021 (4) | 0.0026 (4) | −0.0006 (4) |
| C4 | 0.0202 (5) | 0.0142 (5) | 0.0167 (5) | 0.0009 (4) | 0.0030 (4) | −0.0012 (4) |
| N1 | 0.0221 (4) | 0.0131 (4) | 0.0145 (4) | −0.0008 (3) | 0.0035 (3) | −0.0006 (3) |
| N2 | 0.0264 (5) | 0.0189 (5) | 0.0171 (5) | 0.0024 (4) | 0.0021 (4) | −0.0006 (4) |
| N3 | 0.0395 (6) | 0.0282 (6) | 0.0222 (5) | −0.0010 (5) | 0.0110 (5) | 0.0007 (4) |
| O1 | 0.0282 (4) | 0.0154 (4) | 0.0193 (4) | −0.0016 (3) | 0.0047 (3) | 0.0017 (3) |
| C1—O1 | 1.2367 (14) | C3—H31 | 0.978 (12) |
| C1—N1 | 1.3621 (13) | C3—H32 | 0.985 (12) |
| C1—C2 | 1.4504 (16) | C4—N1 | 1.4602 (13) |
| C2—N2 | 1.3099 (14) | C4—H41 | 0.9900 |
| C2—H21 | 0.915 (12) | C4—H42 | 0.9900 |
| C3—N1 | 1.4589 (13) | N2—N3 | 1.1239 (14) |
| C3—C4i | 1.5193 (15) | ||
| O1—C1—N1 | 121.76 (10) | H31—C3—H32 | 107.6 (11) |
| O1—C1—C2 | 120.75 (10) | N1—C4—C3i | 110.54 (9) |
| N1—C1—C2 | 117.48 (10) | N1—C4—H41 | 109.5 |
| N2—C2—C1 | 114.31 (10) | C3i—C4—H41 | 109.5 |
| N2—C2—H21 | 115.7 (9) | N1—C4—H42 | 109.5 |
| C1—C2—H21 | 129.7 (9) | C3i—C4—H42 | 109.5 |
| N1—C3—C4i | 110.57 (9) | H41—C4—H42 | 108.1 |
| N1—C3—H31 | 111.3 (8) | C1—N1—C3 | 125.53 (9) |
| C4i—C3—H31 | 109.1 (8) | C1—N1—C4 | 119.16 (9) |
| N1—C3—H32 | 108.8 (8) | C3—N1—C4 | 114.17 (8) |
| C4i—C3—H32 | 109.5 (8) | N3—N2—C2 | 178.58 (12) |
| O1—C1—C2—N2 | 4.86 (16) | C2—C1—N1—C4 | −171.95 (9) |
| N1—C1—C2—N2 | −173.69 (9) | C4i—C3—N1—C1 | 137.76 (10) |
| O1—C1—N1—C3 | 176.58 (10) | C4i—C3—N1—C4 | −54.61 (12) |
| C2—C1—N1—C3 | −4.88 (15) | C3i—C4—N1—C1 | −136.92 (9) |
| O1—C1—N1—C4 | 9.51 (15) | C3i—C4—N1—C3 | 54.59 (12) |
| H··· | ||||
| C2—H21···O1ii | 0.92 (1) | 2.39 (1) | 3.2219 (15) | 151 (1) |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| C2—H21⋯O1i | 0.92 (1) | 2.39 (1) | 3.2219 (15) | 151 (1) |
Symmetry code: (i) .