Literature DB >> 24109329

Ethyl 3-(4-chloro-phen-yl)-2-phenyl-3-(4-phenyl-1,2,3-selena-diazol-5-yl)propano-ate.

P Sugumar1, S Sankari, P Manisankar, V Thiruselvam, M N Ponnuswamy.   

Abstract

In the title compound, C25H21ClN2O2Se, the selena-diazole ring is almost planar [maximum deviation = 0.004 (2) Å], and the adjacent benzene ring is twisted by 50.6 (1)° with respect to this ring.

Entities:  

Year:  2013        PMID: 24109329      PMCID: PMC3793742          DOI: 10.1107/S1600536813017790

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to selena­diazol derivatives, see: Khanna (2005 ▶). For related structures, see: Marx et al. (2008 ▶); Muthukumaran et al. (2011 ▶).

Experimental

Crystal data

C25H21ClN2O2Se M = 495.85 Monoclinic, a = 12.1337 (3) Å b = 12.2267 (3) Å c = 16.4423 (4) Å β = 107.744 (1)° V = 2323.26 (10) Å3 Z = 4 Mo Kα radiation μ = 1.76 mm−1 T = 293 K 0.25 × 0.20 × 0.18 mm

Data collection

Bruker SMART APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2008 ▶) T min = 0.663, T max = 0.729 22323 measured reflections 5764 independent reflections 3745 reflections with I > 2σ(I) R int = 0.035

Refinement

R[F 2 > 2σ(F 2)] = 0.037 wR(F 2) = 0.107 S = 1.02 5764 reflections 280 parameters H-atom parameters constrained Δρmax = 0.42 e Å−3 Δρmin = −0.27 e Å−3 Data collection: APEX2 (Bruker, 2008 ▶); cell refinement: SAINT (Bruker, 2008 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536813017790/ng5333sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813017790/ng5333Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813017790/ng5333Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C25H21ClN2O2SeF(000) = 1008
Mr = 495.85Dx = 1.418 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 5764 reflections
a = 12.1337 (3) Åθ = 1.8–28.4°
b = 12.2267 (3) ŵ = 1.76 mm1
c = 16.4423 (4) ÅT = 293 K
β = 107.744 (1)°Block, yellow
V = 2323.26 (10) Å30.25 × 0.20 × 0.18 mm
Z = 4
Bruker SMART APEXII CCD diffractometer5764 independent reflections
Radiation source: fine-focus sealed tube3745 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.035
ω and φ scansθmax = 28.4°, θmin = 1.8°
Absorption correction: multi-scan (SADABS; Bruker, 2008)h = −12→16
Tmin = 0.663, Tmax = 0.729k = −16→15
22323 measured reflectionsl = −21→19
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.037Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.107H-atom parameters constrained
S = 1.02w = 1/[σ2(Fo2) + (0.0471P)2 + 0.6047P] where P = (Fo2 + 2Fc2)/3
5764 reflections(Δ/σ)max = 0.002
280 parametersΔρmax = 0.42 e Å3
0 restraintsΔρmin = −0.27 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.7760 (2)0.5374 (2)0.74986 (16)0.0633 (6)
H10.76560.53100.69160.076*
C20.7134 (3)0.6137 (2)0.7793 (2)0.0836 (9)
H20.66100.65880.74070.100*
C30.7278 (3)0.6234 (3)0.8652 (3)0.0954 (10)
H30.68470.67440.88460.114*
C40.8054 (3)0.5580 (3)0.9219 (2)0.0908 (10)
H40.81510.56470.98000.109*
C50.8696 (2)0.4818 (2)0.89387 (17)0.0706 (7)
H50.92300.43810.93310.085*
C60.85467 (19)0.47046 (18)0.80734 (14)0.0536 (5)
C70.92554 (18)0.38995 (18)0.77867 (13)0.0502 (5)
C80.88943 (17)0.31106 (18)0.71769 (13)0.0469 (5)
C90.76586 (16)0.28344 (17)0.66740 (12)0.0428 (4)
H90.71910.34920.66590.051*
C100.72046 (16)0.19519 (17)0.71371 (12)0.0426 (4)
C110.64815 (19)0.2233 (2)0.76108 (15)0.0549 (5)
H110.62690.29600.76340.066*
C120.6070 (2)0.1451 (2)0.80495 (15)0.0656 (7)
H120.55850.16480.83670.079*
C130.6383 (2)0.0383 (2)0.80109 (15)0.0631 (7)
C140.7116 (2)0.0082 (2)0.75615 (15)0.0622 (6)
H140.7338−0.06440.75510.075*
C150.7521 (2)0.08659 (19)0.71257 (14)0.0538 (5)
H150.80160.06630.68180.065*
C160.75310 (17)0.25174 (17)0.57420 (13)0.0456 (5)
H160.79310.18200.57470.055*
C170.62689 (19)0.23681 (19)0.52183 (13)0.0497 (5)
C180.5471 (2)0.3186 (2)0.51442 (14)0.0640 (6)
H180.56990.38530.54150.077*
C190.4325 (2)0.3023 (3)0.46674 (16)0.0834 (9)
H190.37850.35790.46190.100*
C200.3993 (3)0.2040 (4)0.4268 (2)0.0985 (12)
H200.32220.19230.39580.118*
C210.4772 (3)0.1247 (3)0.4322 (2)0.1093 (13)
H210.45420.05890.40370.131*
C220.5919 (3)0.1399 (2)0.47981 (18)0.0818 (8)
H220.64540.08420.48330.098*
C230.80904 (19)0.3363 (2)0.53277 (14)0.0533 (5)
C240.9294 (3)0.3559 (3)0.4427 (2)0.0910 (9)
H24A0.90330.34060.38200.109*
H24B0.91490.43250.45090.109*
C251.0522 (3)0.3337 (3)0.4767 (3)0.1152 (13)
H25A1.09350.37820.44770.173*
H25B1.06630.25790.46830.173*
H25C1.07810.35020.53660.173*
N11.04418 (17)0.39168 (19)0.81995 (13)0.0663 (5)
N21.10574 (18)0.3221 (2)0.79702 (15)0.0766 (6)
O10.80184 (17)0.43304 (16)0.54165 (12)0.0777 (5)
O20.86582 (16)0.28857 (15)0.48558 (11)0.0679 (5)
Cl10.58491 (9)−0.06117 (8)0.85433 (6)0.1057 (3)
Se11.01461 (2)0.23132 (3)0.710678 (17)0.06928 (12)
U11U22U33U12U13U23
C10.0524 (13)0.0566 (14)0.0712 (15)−0.0052 (11)0.0043 (11)−0.0039 (12)
C20.0652 (17)0.0621 (17)0.109 (2)0.0021 (14)0.0058 (16)−0.0044 (16)
C30.090 (2)0.079 (2)0.120 (3)0.0026 (18)0.036 (2)−0.025 (2)
C40.119 (3)0.079 (2)0.080 (2)−0.015 (2)0.039 (2)−0.0217 (17)
C50.0822 (19)0.0585 (16)0.0642 (16)−0.0078 (13)0.0121 (13)−0.0058 (12)
C60.0494 (12)0.0467 (12)0.0576 (13)−0.0146 (10)0.0057 (10)−0.0040 (10)
C70.0385 (11)0.0530 (13)0.0515 (12)−0.0106 (9)0.0025 (9)0.0027 (10)
C80.0350 (10)0.0535 (12)0.0485 (11)−0.0031 (9)0.0071 (8)0.0028 (9)
C90.0331 (9)0.0476 (12)0.0437 (11)−0.0031 (8)0.0056 (8)−0.0046 (8)
C100.0336 (9)0.0515 (12)0.0391 (10)−0.0046 (8)0.0058 (8)−0.0060 (8)
C110.0436 (11)0.0644 (14)0.0559 (13)0.0018 (10)0.0142 (10)−0.0053 (11)
C120.0503 (13)0.093 (2)0.0591 (14)−0.0091 (13)0.0247 (11)−0.0038 (13)
C130.0588 (14)0.0749 (18)0.0536 (13)−0.0249 (13)0.0141 (11)0.0025 (12)
C140.0702 (16)0.0545 (14)0.0609 (14)−0.0117 (12)0.0185 (12)−0.0019 (11)
C150.0561 (13)0.0543 (14)0.0546 (13)−0.0043 (10)0.0222 (10)−0.0054 (10)
C160.0383 (10)0.0516 (13)0.0451 (11)−0.0037 (9)0.0098 (8)−0.0024 (9)
C170.0447 (11)0.0649 (14)0.0365 (10)−0.0117 (10)0.0082 (8)−0.0027 (9)
C180.0468 (13)0.0940 (19)0.0471 (13)0.0022 (13)0.0082 (10)−0.0126 (12)
C190.0429 (13)0.148 (3)0.0523 (14)0.0061 (16)0.0045 (11)−0.0008 (16)
C200.0558 (18)0.154 (4)0.0665 (18)−0.038 (2)−0.0093 (14)0.011 (2)
C210.097 (3)0.095 (3)0.101 (2)−0.043 (2)−0.024 (2)−0.007 (2)
C220.0739 (18)0.0680 (18)0.0809 (18)−0.0149 (14)−0.0103 (14)−0.0079 (14)
C230.0448 (12)0.0626 (16)0.0478 (12)−0.0083 (10)0.0073 (9)0.0007 (10)
C240.085 (2)0.114 (3)0.086 (2)−0.0062 (19)0.0439 (17)0.0262 (18)
C250.087 (3)0.094 (3)0.179 (4)−0.016 (2)0.062 (3)0.019 (2)
N10.0416 (11)0.0765 (14)0.0671 (13)−0.0124 (10)−0.0039 (9)−0.0003 (10)
N20.0349 (10)0.0998 (18)0.0827 (15)−0.0066 (11)−0.0002 (10)−0.0018 (13)
O10.0910 (14)0.0613 (12)0.0898 (13)−0.0124 (10)0.0409 (11)0.0029 (9)
O20.0688 (11)0.0807 (12)0.0641 (10)−0.0032 (9)0.0352 (9)0.0054 (9)
Cl10.1182 (7)0.1091 (7)0.1002 (6)−0.0457 (5)0.0485 (5)0.0149 (5)
Se10.03892 (14)0.0867 (2)0.0777 (2)0.00811 (12)0.01107 (11)−0.00725 (13)
C1—C21.380 (4)C14—H140.9300
C1—C61.387 (3)C15—H150.9300
C1—H10.9300C16—C231.509 (3)
C2—C31.374 (4)C16—C171.522 (3)
C2—H20.9300C16—H160.9800
C3—C41.364 (5)C17—C181.372 (3)
C3—H30.9300C17—C221.372 (3)
C4—C51.381 (4)C18—C191.386 (3)
C4—H40.9300C18—H180.9300
C5—C61.385 (3)C19—C201.371 (5)
C5—H50.9300C19—H190.9300
C6—C71.476 (3)C20—C211.338 (5)
C7—C81.364 (3)C20—H200.9300
C7—N11.392 (3)C21—C221.386 (4)
C8—C91.513 (3)C21—H210.9300
C8—Se11.838 (2)C22—H220.9300
C9—C101.518 (3)C23—O11.198 (3)
C9—C161.542 (3)C23—O21.320 (3)
C9—H90.9800C24—C251.448 (5)
C10—C111.382 (3)C24—O21.449 (3)
C10—C151.384 (3)C24—H24A0.9700
C11—C121.379 (3)C24—H24B0.9700
C11—H110.9300C25—H25A0.9600
C12—C131.367 (4)C25—H25B0.9600
C12—H120.9300C25—H25C0.9600
C13—C141.368 (3)N1—N21.263 (3)
C13—Cl11.736 (2)N2—Se11.874 (2)
C14—C151.374 (3)
C2—C1—C6119.8 (3)C14—C15—H15119.4
C2—C1—H1120.1C10—C15—H15119.4
C6—C1—H1120.1C23—C16—C17109.90 (17)
C3—C2—C1120.5 (3)C23—C16—C9110.70 (17)
C3—C2—H2119.7C17—C16—C9111.81 (17)
C1—C2—H2119.7C23—C16—H16108.1
C4—C3—C2119.8 (3)C17—C16—H16108.1
C4—C3—H3120.1C9—C16—H16108.1
C2—C3—H3120.1C18—C17—C22118.9 (2)
C3—C4—C5120.6 (3)C18—C17—C16121.6 (2)
C3—C4—H4119.7C22—C17—C16119.5 (2)
C5—C4—H4119.7C17—C18—C19120.3 (3)
C4—C5—C6120.0 (3)C17—C18—H18119.8
C4—C5—H5120.0C19—C18—H18119.8
C6—C5—H5120.0C20—C19—C18119.7 (3)
C5—C6—C1119.2 (2)C20—C19—H19120.2
C5—C6—C7119.2 (2)C18—C19—H19120.2
C1—C6—C7121.5 (2)C21—C20—C19120.3 (3)
C8—C7—N1115.0 (2)C21—C20—H20119.8
C8—C7—C6128.22 (19)C19—C20—H20119.8
N1—C7—C6116.80 (19)C20—C21—C22120.6 (3)
C7—C8—C9127.0 (2)C20—C21—H21119.7
C7—C8—Se1109.56 (15)C22—C21—H21119.7
C9—C8—Se1123.19 (16)C17—C22—C21120.2 (3)
C8—C9—C10109.59 (16)C17—C22—H22119.9
C8—C9—C16112.45 (17)C21—C22—H22119.9
C10—C9—C16112.21 (16)O1—C23—O2125.4 (2)
C8—C9—H9107.4O1—C23—C16124.2 (2)
C10—C9—H9107.4O2—C23—C16110.4 (2)
C16—C9—H9107.4C25—C24—O2110.1 (3)
C11—C10—C15118.2 (2)C25—C24—H24A109.6
C11—C10—C9119.7 (2)O2—C24—H24A109.6
C15—C10—C9122.06 (19)C25—C24—H24B109.6
C12—C11—C10121.1 (2)O2—C24—H24B109.6
C12—C11—H11119.5H24A—C24—H24B108.2
C10—C11—H11119.5C24—C25—H25A109.5
C13—C12—C11119.1 (2)C24—C25—H25B109.5
C13—C12—H12120.4H25A—C25—H25B109.5
C11—C12—H12120.4C24—C25—H25C109.5
C14—C13—C12121.2 (2)H25A—C25—H25C109.5
C14—C13—Cl1119.2 (2)H25B—C25—H25C109.5
C12—C13—Cl1119.6 (2)N2—N1—C7117.5 (2)
C13—C14—C15119.3 (2)N1—N2—Se1111.03 (15)
C13—C14—H14120.4C23—O2—C24119.0 (2)
C15—C14—H14120.4C8—Se1—N286.93 (10)
C14—C15—C10121.2 (2)
C6—C1—C2—C3−0.4 (4)C11—C10—C15—C141.0 (3)
C1—C2—C3—C40.7 (5)C9—C10—C15—C14178.84 (19)
C2—C3—C4—C5−0.1 (5)C8—C9—C16—C23−50.6 (2)
C3—C4—C5—C6−0.7 (5)C10—C9—C16—C23−174.72 (17)
C4—C5—C6—C11.0 (4)C8—C9—C16—C17−173.52 (18)
C4—C5—C6—C7179.0 (2)C10—C9—C16—C1762.4 (2)
C2—C1—C6—C5−0.5 (4)C23—C16—C17—C18−66.8 (3)
C2—C1—C6—C7−178.4 (2)C9—C16—C17—C1856.6 (3)
C5—C6—C7—C8129.5 (3)C23—C16—C17—C22112.2 (3)
C1—C6—C7—C8−52.6 (3)C9—C16—C17—C22−124.4 (2)
C5—C6—C7—N1−48.6 (3)C22—C17—C18—C191.4 (4)
C1—C6—C7—N1129.3 (2)C16—C17—C18—C19−179.6 (2)
N1—C7—C8—C9174.8 (2)C17—C18—C19—C20−0.1 (4)
C6—C7—C8—C9−3.3 (4)C18—C19—C20—C21−1.4 (5)
N1—C7—C8—Se1−0.1 (2)C19—C20—C21—C221.6 (6)
C6—C7—C8—Se1−178.24 (18)C18—C17—C22—C21−1.3 (4)
C7—C8—C9—C10−91.3 (3)C16—C17—C22—C21179.7 (3)
Se1—C8—C9—C1083.0 (2)C20—C21—C22—C17−0.2 (6)
C7—C8—C9—C16143.2 (2)C17—C16—C23—O182.5 (3)
Se1—C8—C9—C16−42.5 (2)C9—C16—C23—O1−41.5 (3)
C8—C9—C10—C11101.5 (2)C17—C16—C23—O2−97.2 (2)
C16—C9—C10—C11−132.8 (2)C9—C16—C23—O2138.78 (19)
C8—C9—C10—C15−76.3 (2)C8—C7—N1—N20.5 (3)
C16—C9—C10—C1549.4 (2)C6—C7—N1—N2178.9 (2)
C15—C10—C11—C12−1.1 (3)C7—N1—N2—Se1−0.7 (3)
C9—C10—C11—C12−178.98 (19)O1—C23—O2—C242.6 (4)
C10—C11—C12—C13−0.1 (4)C16—C23—O2—C24−177.8 (2)
C11—C12—C13—C141.5 (4)C25—C24—O2—C23115.2 (3)
C11—C12—C13—Cl1−178.78 (18)C7—C8—Se1—N2−0.22 (17)
C12—C13—C14—C15−1.5 (4)C9—C8—Se1—N2−175.37 (18)
Cl1—C13—C14—C15178.69 (18)N1—N2—Se1—C80.5 (2)
C13—C14—C15—C100.3 (3)
  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  4-(4-Chloro-phen-yl)-5-[1-(4-chloro-phenyl)-2-methyl-2-nitro-prop-yl]-1,2,3-selenadiazole.

Authors:  A Marx; S Saravanan; S Muthusubramanian; V Manivannan; Nigam P Rath
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-01-04

3.  1-(2-Naphth-yl)-3-phenyl-3-(4,5,6,7-tetra-hydro-1,2,3-benzoselenadiazol-4-yl)propan-1-one.

Authors:  J Muthukumaran; M Nachiappan; S Chitra; P Manisankar; Suman Bhattacharya; S Muthusubramanian; R Krishna; J Jeyakanthan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-07-13

4.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  4 in total

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