Literature DB >> 24109319

3-(4-Amino-phen-yl)-5-(4-meth-oxy-phen-yl)-4,5-di-hydro-1H-pyrazole-1-carbo-thio-amide.

Thitipone Suwunwong1, Suchada Chantrapromma, C S Chidan Kumar, Hoong-Kun Fun.   

Abstract

In the mol-ecule of title pyrazoline derivative, C17H18N4OS, the pyrazole ring adopts an envelope conformation with the flap atom, which bears the meth-oxy-phenyl substituent, displaced by 0.0750 (12) Å from the plane through the other ring atoms. The two substituted benzene rings make a dihedral angle of 70.59 (6)°. The meth-oxy group is twisted slightly with respect to the attached benzene ring [Cmeth-yl-O-C-C torsion angle = -8.84 (15)°]. An intra-molecular N-H⋯N hydrogen bond occurs. In the crystal, the pyrazoline mol-ecules are linked by N-H⋯O and N-H⋯S hydrogen bonds into zigzag layers parallel to the bc plane and stacked along the a axis by π-π inter-actions with centroid-centroid distances of 3.4690 (7) and 3.5792 (7) Å. C-H⋯π inter-actions are also present.

Entities:  

Year:  2013        PMID: 24109319      PMCID: PMC3793732          DOI: 10.1107/S1600536813018096

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For bond-length data, see: Allen et al. (1987 ▶). For hydrogen-bond motifs, see: Bernstein et al. (1995 ▶). For puckering parameters, see: Cremer & Pople (1975 ▶). For related structures, see: Fun et al. (2011 ▶); Quah et al. (2013 ▶). For background to and applications of pyrazoline derivatives, see: Gong et al. (2010 ▶); Husain et al. (2008 ▶); Khode et al. (2009 ▶); Lv et al. (2011 ▶); Sakthinathan et al. (2012 ▶); Shaharyar et al. (2010 ▶); Shoman et al. (2009 ▶). For the stability of the temperature controller, see: Cosier & Glazer (1986 ▶).

Experimental

Crystal data

C17H18N4OS M = 326.42 Monoclinic, a = 8.0052 (2) Å b = 17.3439 (5) Å c = 12.4588 (3) Å β = 114.789 (1)° V = 1570.41 (7) Å3 Z = 4 Mo Kα radiation μ = 0.22 mm−1 T = 100 K 0.57 × 0.39 × 0.29 mm

Data collection

Bruker APEXII CCD area detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.886, T max = 0.940 23819 measured reflections 4571 independent reflections 4045 reflections with I > 2σ(I) R int = 0.034

Refinement

R[F 2 > 2σ(F 2)] = 0.036 wR(F 2) = 0.104 S = 1.05 4571 reflections 225 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.43 e Å−3 Δρmin = −0.26 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL, PLATON (Spek, 2009 ▶) and publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536813018096/rz5075sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813018096/rz5075Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813018096/rz5075Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C17H18N4OSF(000) = 688
Mr = 326.42Dx = 1.381 Mg m3
Monoclinic, P21/cMelting point = 479–480 K
Hall symbol: -P 2ybcMo Kα radiation, λ = 0.71073 Å
a = 8.0052 (2) ÅCell parameters from 4571 reflections
b = 17.3439 (5) Åθ = 2.2–30.0°
c = 12.4588 (3) ŵ = 0.22 mm1
β = 114.789 (1)°T = 100 K
V = 1570.41 (7) Å3Block, brown
Z = 40.57 × 0.39 × 0.29 mm
Bruker APEXII CCD area detector diffractometer4571 independent reflections
Radiation source: sealed tube4045 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.034
φ and ω scansθmax = 30.0°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −11→11
Tmin = 0.886, Tmax = 0.940k = −24→22
23819 measured reflectionsl = −17→17
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.036Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.104H atoms treated by a mixture of independent and constrained refinement
S = 1.05w = 1/[σ2(Fo2) + (0.0561P)2 + 0.5572P] where P = (Fo2 + 2Fc2)/3
4571 reflections(Δ/σ)max = 0.002
225 parametersΔρmax = 0.43 e Å3
0 restraintsΔρmin = −0.26 e Å3
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.96189 (4)0.737361 (16)0.23440 (3)0.02103 (9)
O10.20880 (12)0.50083 (5)0.02032 (7)0.02307 (18)
N10.56007 (13)0.88586 (5)0.17966 (8)0.01819 (18)
N20.65454 (13)0.82048 (5)0.16720 (8)0.01788 (18)
N3−0.00793 (15)1.16984 (6)−0.00281 (10)0.0223 (2)
N40.88104 (15)0.85193 (6)0.34723 (9)0.0236 (2)
C10.20776 (14)0.99640 (6)−0.05879 (10)0.0176 (2)
H1A0.20200.9666−0.12420.021*
C20.10060 (15)1.06212 (6)−0.07863 (10)0.0183 (2)
H2A0.02371.0772−0.15730.022*
C30.10467 (15)1.10666 (6)0.01667 (10)0.0181 (2)
C40.22393 (15)1.08391 (6)0.13240 (10)0.0191 (2)
H4A0.23041.11380.19790.023*
C50.33141 (15)1.01856 (6)0.15128 (10)0.0182 (2)
H5A0.41121.00420.22980.022*
C60.32452 (14)0.97303 (6)0.05611 (10)0.0168 (2)
C70.43893 (14)0.90464 (6)0.07541 (9)0.0165 (2)
C80.43688 (14)0.85248 (6)−0.02203 (9)0.0169 (2)
H8A0.48060.8799−0.07510.020*
H8B0.31190.8319−0.06930.020*
C90.57125 (14)0.78746 (6)0.04662 (9)0.0167 (2)
H9A0.66760.78100.01600.020*
C100.47626 (14)0.71095 (6)0.04153 (9)0.0163 (2)
C110.41276 (16)0.68894 (7)0.12532 (10)0.0202 (2)
H11A0.43100.72220.18980.024*
C120.32283 (16)0.61881 (7)0.11590 (10)0.0211 (2)
H12A0.28050.60450.17390.025*
C130.29479 (14)0.56940 (6)0.02121 (10)0.0180 (2)
C140.35358 (16)0.59149 (6)−0.06472 (10)0.0202 (2)
H14A0.33210.5590−0.13060.024*
C150.44439 (16)0.66176 (6)−0.05325 (10)0.0199 (2)
H15A0.48550.6764−0.11160.024*
C160.82554 (15)0.80698 (6)0.25017 (10)0.0185 (2)
C170.15491 (17)0.45460 (7)−0.08438 (11)0.0252 (2)
H17A0.09450.4075−0.07510.038*
H17B0.26410.4408−0.09700.038*
H17C0.06940.4839−0.15260.038*
H1N3−0.039 (2)1.1943 (10)−0.0690 (15)0.030 (4)*
H2N30.007 (3)1.1952 (11)0.0576 (17)0.038 (5)*
H1N40.992 (3)0.8465 (11)0.3959 (17)0.041 (5)*
H2N40.810 (2)0.8906 (10)0.3477 (14)0.031 (4)*
U11U22U33U12U13U23
S10.01945 (14)0.01830 (14)0.02342 (15)0.00144 (9)0.00711 (11)0.00405 (10)
O10.0271 (4)0.0168 (4)0.0234 (4)−0.0078 (3)0.0088 (3)−0.0032 (3)
N10.0184 (4)0.0153 (4)0.0204 (4)−0.0008 (3)0.0076 (3)−0.0010 (3)
N20.0175 (4)0.0147 (4)0.0187 (4)−0.0008 (3)0.0049 (3)−0.0012 (3)
N30.0288 (5)0.0160 (4)0.0255 (5)0.0033 (4)0.0146 (4)0.0015 (4)
N40.0210 (5)0.0219 (5)0.0208 (5)−0.0010 (4)0.0017 (4)−0.0021 (4)
C10.0182 (5)0.0154 (5)0.0195 (5)−0.0025 (4)0.0083 (4)−0.0013 (4)
C20.0189 (5)0.0164 (5)0.0197 (5)−0.0019 (4)0.0082 (4)0.0008 (4)
C30.0185 (5)0.0146 (4)0.0241 (5)−0.0023 (4)0.0116 (4)0.0004 (4)
C40.0211 (5)0.0180 (5)0.0210 (5)−0.0026 (4)0.0115 (4)−0.0019 (4)
C50.0194 (5)0.0178 (5)0.0183 (5)−0.0027 (4)0.0087 (4)0.0002 (4)
C60.0172 (4)0.0143 (4)0.0196 (5)−0.0024 (4)0.0086 (4)−0.0006 (4)
C70.0164 (4)0.0149 (4)0.0192 (5)−0.0031 (3)0.0086 (4)0.0000 (4)
C80.0177 (4)0.0142 (4)0.0181 (5)−0.0009 (3)0.0068 (4)−0.0001 (4)
C90.0163 (4)0.0156 (4)0.0173 (5)−0.0016 (3)0.0060 (4)−0.0007 (4)
C100.0155 (4)0.0139 (4)0.0179 (5)0.0002 (3)0.0053 (4)0.0003 (4)
C110.0228 (5)0.0188 (5)0.0190 (5)−0.0045 (4)0.0089 (4)−0.0039 (4)
C120.0228 (5)0.0223 (5)0.0188 (5)−0.0054 (4)0.0094 (4)−0.0014 (4)
C130.0161 (4)0.0143 (4)0.0204 (5)−0.0009 (3)0.0044 (4)0.0004 (4)
C140.0239 (5)0.0164 (5)0.0205 (5)−0.0010 (4)0.0096 (4)−0.0039 (4)
C150.0236 (5)0.0171 (5)0.0205 (5)−0.0012 (4)0.0108 (4)−0.0009 (4)
C160.0184 (5)0.0156 (5)0.0192 (5)−0.0031 (4)0.0057 (4)0.0028 (4)
C170.0284 (6)0.0175 (5)0.0245 (6)−0.0053 (4)0.0061 (5)−0.0047 (4)
S1—C161.6935 (12)C5—H5A0.9500
O1—C131.3719 (13)C6—C71.4557 (15)
O1—C171.4349 (14)C7—C81.5086 (15)
N1—C71.2951 (14)C8—C91.5457 (15)
N1—N21.4072 (13)C8—H8A0.9900
N2—C161.3456 (14)C8—H8B0.9900
N2—C91.4798 (14)C9—C101.5173 (14)
N3—C31.3744 (14)C9—H9A1.0000
N3—H1N30.866 (18)C10—C151.3910 (15)
N3—H2N30.836 (19)C10—C111.3924 (15)
N4—C161.3479 (15)C11—C121.3931 (15)
N4—H1N40.85 (2)C11—H11A0.9500
N4—H2N40.882 (18)C12—C131.3980 (16)
C1—C21.3851 (15)C12—H12A0.9500
C1—C61.4018 (15)C13—C141.3918 (16)
C1—H1A0.9500C14—C151.3953 (15)
C2—C31.4053 (15)C14—H14A0.9500
C2—H2A0.9500C15—H15A0.9500
C3—C41.4113 (16)C17—H17A0.9800
C4—C51.3822 (15)C17—H17B0.9800
C4—H4A0.9500C17—H17C0.9800
C5—C61.4063 (15)
C13—O1—C17116.77 (9)C9—C8—H8B111.2
C7—N1—N2107.65 (9)H8A—C8—H8B109.1
C16—N2—N1118.43 (9)N2—C9—C10112.67 (9)
C16—N2—C9126.36 (10)N2—C9—C8101.08 (8)
N1—N2—C9112.93 (8)C10—C9—C8113.24 (8)
C3—N3—H1N3117.7 (11)N2—C9—H9A109.8
C3—N3—H2N3115.2 (13)C10—C9—H9A109.8
H1N3—N3—H2N3118.3 (17)C8—C9—H9A109.8
C16—N4—H1N4115.4 (13)C15—C10—C11118.26 (10)
C16—N4—H2N4118.4 (11)C15—C10—C9118.83 (10)
H1N4—N4—H2N4124.6 (16)C11—C10—C9122.86 (10)
C2—C1—C6121.20 (10)C10—C11—C12120.97 (10)
C2—C1—H1A119.4C10—C11—H11A119.5
C6—C1—H1A119.4C12—C11—H11A119.5
C1—C2—C3120.55 (10)C11—C12—C13120.05 (11)
C1—C2—H2A119.7C11—C12—H12A120.0
C3—C2—H2A119.7C13—C12—H12A120.0
N3—C3—C2120.53 (10)O1—C13—C14124.25 (10)
N3—C3—C4121.06 (10)O1—C13—C12116.15 (10)
C2—C3—C4118.40 (10)C14—C13—C12119.60 (10)
C5—C4—C3120.62 (10)C13—C14—C15119.43 (10)
C5—C4—H4A119.7C13—C14—H14A120.3
C3—C4—H4A119.7C15—C14—H14A120.3
C4—C5—C6121.02 (10)C10—C15—C14121.67 (10)
C4—C5—H5A119.5C10—C15—H15A119.2
C6—C5—H5A119.5C14—C15—H15A119.2
C1—C6—C5118.19 (10)N2—C16—N4115.79 (10)
C1—C6—C7120.55 (10)N2—C16—S1122.17 (9)
C5—C6—C7121.24 (10)N4—C16—S1122.03 (9)
N1—C7—C6121.70 (10)O1—C17—H17A109.5
N1—C7—C8114.02 (9)O1—C17—H17B109.5
C6—C7—C8124.19 (9)H17A—C17—H17B109.5
C7—C8—C9102.83 (8)O1—C17—H17C109.5
C7—C8—H8A111.2H17A—C17—H17C109.5
C9—C8—H8A111.2H17B—C17—H17C109.5
C7—C8—H8B111.2
C7—N1—N2—C16155.52 (10)N1—N2—C9—C812.22 (11)
C7—N1—N2—C9−8.44 (12)C7—C8—C9—N2−10.76 (10)
C6—C1—C2—C3−0.83 (16)C7—C8—C9—C10110.01 (9)
C1—C2—C3—N3−176.99 (10)N2—C9—C10—C15−159.59 (10)
C1—C2—C3—C41.66 (16)C8—C9—C10—C1586.46 (12)
N3—C3—C4—C5177.48 (10)N2—C9—C10—C1123.02 (14)
C2—C3—C4—C5−1.17 (16)C8—C9—C10—C11−90.94 (12)
C3—C4—C5—C6−0.18 (16)C15—C10—C11—C121.24 (17)
C2—C1—C6—C5−0.52 (16)C9—C10—C11—C12178.65 (10)
C2—C1—C6—C7−178.81 (10)C10—C11—C12—C13−0.13 (17)
C4—C5—C6—C11.02 (16)C17—O1—C13—C14−8.84 (15)
C4—C5—C6—C7179.30 (10)C17—O1—C13—C12171.16 (10)
N2—N1—C7—C6−176.28 (9)C11—C12—C13—O1178.59 (10)
N2—N1—C7—C80.30 (12)C11—C12—C13—C14−1.41 (17)
C1—C6—C7—N1173.53 (10)O1—C13—C14—C15−178.19 (10)
C5—C6—C7—N1−4.71 (16)C12—C13—C14—C151.81 (16)
C1—C6—C7—C8−2.69 (16)C11—C10—C15—C14−0.84 (16)
C5—C6—C7—C8179.07 (10)C9—C10—C15—C14−178.35 (10)
N1—C7—C8—C97.16 (12)C13—C14—C15—C10−0.69 (17)
C6—C7—C8—C9−176.35 (9)N1—N2—C16—N49.07 (15)
C16—N2—C9—C1088.62 (13)C9—N2—C16—N4170.65 (10)
N1—N2—C9—C10−108.95 (10)N1—N2—C16—S1−171.50 (8)
C16—N2—C9—C8−150.21 (10)C9—N2—C16—S1−9.92 (16)
D—H···AD—HH···AD···AD—H···A
N3—H1N3···S1i0.866 (17)2.664 (17)3.4559 (12)152.5 (15)
N3—H2N3···S1ii0.84 (2)2.60 (2)3.4142 (12)164.2 (18)
N4—H2N4···N10.881 (17)2.209 (16)2.6093 (15)107.2 (13)
N4—H2N4···O1ii0.881 (17)2.567 (17)3.3022 (14)141.5 (13)
C8—H8A···Cg2i0.992.663.4159 (13)133
C17—H17B···Cg3iii0.982.943.8351 (15)152
Table 1

Hydrogen-bond geometry (Å, °)

Cg2 is the centroid of the C1–C6 ring.

D—H⋯A D—HH⋯A DA D—H⋯A
N3—H1N3⋯S1i 0.866 (17)2.664 (17)3.4559 (12)152.5 (15)
N3—H2N3⋯S1ii 0.84 (2)2.60 (2)3.4142 (12)164.2 (18)
N4—H2N4⋯N10.881 (17)2.209 (16)2.6093 (15)107.2 (13)
N4—H2N4⋯O1ii 0.881 (17)2.567 (17)3.3022 (14)141.5 (13)
C8—H8ACg2i 0.992.663.4159 (13)133

Symmetry codes: (i) ; (ii) .

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7.  Synthesis and investigation of anti-inflammatory activity and gastric ulcerogenicity of novel nitric oxide-donating pyrazoline derivatives.

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8.  3-(4-Bromo-phen-yl)-5-[4-(dimethyl-amino)-phen-yl]-4,5-dihydro-1H-pyrazole-1-carbothio-amide.

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Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-02-23

9.  3-(4-Chloro-phen-yl)-5-(4-eth-oxy-phen-yl)-4,5-dihydro-1H-pyrazole-1-carbothio-amide ethanol monosolvate.

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