Literature DB >> 24109308

5-Chloro-2-(4-methyl-phen-yl)-3-methyl-sulfinyl-1-benzo-furan.

Hong Dae Choi1, Pil Ja Seo, Uk Lee.   

Abstract

In the title compound, C16H13ClO2S, the dihedral angle between the mean plane [r.m.s. deviation = 0.004 (2) Å] of the benzo-furan ring system and the 4-methyl-phenyl ring is 29.25 (8)°. In the crystal, inversion dimers linked by pairs of weak C-H⋯O interactions generate R 2 (2)(14) loops.

Entities:  

Year:  2013        PMID: 24109308      PMCID: PMC3793721          DOI: 10.1107/S1600536813018400

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the pharmacological activity of benzo­furan compounds, see: Aslam et al. (2009 ▶); Galal et al. (2009 ▶); Khan et al. (2005 ▶). For natural products with benzo­furan rings, see: Akgul & Anil (2003 ▶); Soekamto et al. (2003 ▶). For the crystal structures of related compounds, see: Choi et al. (2007 ▶, 2009 ▶).

Experimental

Crystal data

C16H13ClO2S M = 304.77 Triclinic, a = 8.0694 (8) Å b = 8.0763 (8) Å c = 11.4208 (11) Å α = 90.185 (6)° β = 96.280 (6)° γ = 111.701 (6)° V = 686.63 (12) Å3 Z = 2 Mo Kα radiation μ = 0.43 mm−1 T = 173 K 0.35 × 0.34 × 0.10 mm

Data collection

Bruker SMART APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.865, T max = 0.958 12808 measured reflections 3423 independent reflections 3021 reflections with I > 2σ(I) R int = 0.048

Refinement

R[F 2 > 2σ(F 2)] = 0.038 wR(F 2) = 0.103 S = 1.05 3423 reflections 183 parameters H-atom parameters constrained Δρmax = 0.32 e Å−3 Δρmin = −0.28 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶) and DIAMOND (Brandenburg, 1998 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536813018400/nk2211sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813018400/nk2211Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813018400/nk2211Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H13ClO2SZ = 2
Mr = 304.77F(000) = 316
Triclinic, P1Dx = 1.474 Mg m3
Hall symbol: -P 1Melting point = 459–460 K
a = 8.0694 (8) ÅMo Kα radiation, λ = 0.71073 Å
b = 8.0763 (8) ÅCell parameters from 4424 reflections
c = 11.4208 (11) Åθ = 2.7–28.1°
α = 90.185 (6)°µ = 0.43 mm1
β = 96.280 (6)°T = 173 K
γ = 111.701 (6)°Block, colourless
V = 686.63 (12) Å30.35 × 0.34 × 0.10 mm
Bruker SMART APEXII CCD diffractometer3423 independent reflections
Radiation source: rotating anode3021 reflections with I > 2σ(I)
Graphite multilayer monochromatorRint = 0.048
Detector resolution: 10.0 pixels mm-1θmax = 28.4°, θmin = 1.8°
φ and ω scansh = −10→10
Absorption correction: multi-scan (SADABS; Bruker, 2009)k = −10→10
Tmin = 0.865, Tmax = 0.958l = −15→15
12808 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.038Hydrogen site location: difference Fourier map
wR(F2) = 0.103H-atom parameters constrained
S = 1.05w = 1/[σ2(Fo2) + (0.0432P)2 + 0.3137P] where P = (Fo2 + 2Fc2)/3
3423 reflections(Δ/σ)max < 0.001
183 parametersΔρmax = 0.32 e Å3
0 restraintsΔρmin = −0.28 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.21613 (6)−0.06293 (6)0.00434 (4)0.03430 (13)
S10.79728 (5)0.32171 (5)0.40498 (4)0.02612 (12)
O10.30621 (15)0.15287 (15)0.50057 (10)0.0257 (2)
O20.82257 (18)0.19866 (17)0.31756 (13)0.0401 (3)
C10.5655 (2)0.2423 (2)0.41897 (14)0.0239 (3)
C20.4219 (2)0.1456 (2)0.32835 (14)0.0236 (3)
C30.4092 (2)0.0990 (2)0.20888 (14)0.0259 (3)
H30.51220.13280.16790.031*
C40.2396 (2)0.0014 (2)0.15325 (14)0.0269 (3)
C50.0852 (2)−0.0505 (2)0.21040 (15)0.0291 (3)
H5−0.0284−0.11790.16800.035*
C60.0970 (2)−0.0040 (2)0.32891 (15)0.0282 (3)
H6−0.0061−0.03700.36980.034*
C70.2666 (2)0.0929 (2)0.38407 (14)0.0241 (3)
C80.4897 (2)0.2427 (2)0.52001 (14)0.0238 (3)
C90.5607 (2)0.3179 (2)0.63960 (14)0.0238 (3)
C100.7141 (2)0.4725 (2)0.66158 (15)0.0280 (3)
H100.77380.53140.59760.034*
C110.7804 (2)0.5414 (2)0.77602 (15)0.0296 (4)
H110.88620.64580.78980.036*
C120.6930 (2)0.4586 (2)0.87084 (15)0.0282 (3)
C130.5390 (2)0.3061 (2)0.84809 (15)0.0281 (3)
H130.47800.24890.91210.034*
C140.4720 (2)0.2353 (2)0.73466 (14)0.0256 (3)
H140.36610.13090.72130.031*
C150.7646 (3)0.5323 (3)0.99514 (16)0.0390 (4)
H15A0.66530.50051.04360.059*
H15B0.82280.66240.99520.059*
H15C0.85220.48181.02760.059*
C160.8112 (3)0.5192 (2)0.32875 (16)0.0318 (4)
H16A0.93110.57490.30360.048*
H16B0.78960.60310.38150.048*
H16C0.72060.48770.25950.048*
U11U22U33U12U13U23
Cl10.0365 (3)0.0364 (2)0.0259 (2)0.01030 (19)−0.00156 (17)−0.00172 (16)
S10.0199 (2)0.0253 (2)0.0326 (2)0.00772 (16)0.00336 (15)0.00359 (15)
O10.0207 (6)0.0284 (6)0.0265 (6)0.0073 (5)0.0031 (4)−0.0001 (4)
O20.0316 (7)0.0302 (6)0.0614 (9)0.0115 (6)0.0178 (6)−0.0034 (6)
C10.0214 (8)0.0241 (7)0.0262 (7)0.0090 (6)0.0017 (6)0.0007 (6)
C20.0218 (8)0.0215 (7)0.0281 (8)0.0091 (6)0.0014 (6)0.0021 (6)
C30.0257 (8)0.0260 (7)0.0269 (8)0.0107 (6)0.0035 (6)0.0021 (6)
C40.0303 (9)0.0243 (7)0.0255 (7)0.0106 (7)−0.0008 (6)0.0001 (6)
C50.0252 (8)0.0272 (8)0.0315 (8)0.0076 (7)−0.0026 (7)0.0006 (6)
C60.0226 (8)0.0287 (8)0.0329 (8)0.0089 (7)0.0031 (6)0.0024 (6)
C70.0238 (8)0.0237 (7)0.0256 (7)0.0098 (6)0.0021 (6)0.0015 (6)
C80.0201 (8)0.0218 (7)0.0290 (8)0.0073 (6)0.0021 (6)0.0021 (6)
C90.0241 (8)0.0240 (7)0.0258 (7)0.0117 (6)0.0034 (6)0.0014 (6)
C100.0301 (9)0.0248 (7)0.0282 (8)0.0081 (7)0.0072 (7)0.0031 (6)
C110.0297 (9)0.0234 (7)0.0329 (8)0.0065 (7)0.0046 (7)−0.0028 (6)
C120.0311 (9)0.0278 (8)0.0275 (8)0.0132 (7)0.0030 (7)−0.0024 (6)
C130.0298 (9)0.0296 (8)0.0270 (8)0.0123 (7)0.0075 (7)0.0048 (6)
C140.0228 (8)0.0236 (7)0.0301 (8)0.0081 (6)0.0040 (6)0.0027 (6)
C150.0417 (11)0.0422 (10)0.0295 (9)0.0116 (9)0.0035 (8)−0.0084 (7)
C160.0342 (10)0.0272 (8)0.0355 (9)0.0118 (7)0.0087 (7)0.0073 (7)
Cl1—C41.7462 (16)C9—C101.393 (2)
S1—O21.4879 (13)C9—C141.399 (2)
S1—C11.7648 (17)C10—C111.388 (2)
S1—C161.7925 (17)C10—H100.9500
O1—C71.3768 (18)C11—C121.393 (2)
O1—C81.3790 (19)C11—H110.9500
C1—C81.364 (2)C12—C131.387 (2)
C1—C21.445 (2)C12—C151.505 (2)
C2—C71.393 (2)C13—C141.382 (2)
C2—C31.397 (2)C13—H130.9500
C3—C41.381 (2)C14—H140.9500
C3—H30.9500C15—H15A0.9800
C4—C51.396 (2)C15—H15B0.9800
C5—C61.387 (2)C15—H15C0.9800
C5—H50.9500C16—H16A0.9800
C6—C71.378 (2)C16—H16B0.9800
C6—H60.9500C16—H16C0.9800
C8—C91.459 (2)
O2—S1—C1106.64 (7)C10—C9—C8121.45 (14)
O2—S1—C16106.07 (8)C14—C9—C8119.67 (15)
C1—S1—C1697.73 (8)C11—C10—C9120.65 (15)
C7—O1—C8106.62 (12)C11—C10—H10119.7
C8—C1—C2107.24 (14)C9—C10—H10119.7
C8—C1—S1126.49 (13)C10—C11—C12120.54 (16)
C2—C1—S1125.89 (12)C10—C11—H11119.7
C7—C2—C3119.27 (15)C12—C11—H11119.7
C7—C2—C1105.00 (14)C13—C12—C11118.46 (15)
C3—C2—C1135.73 (15)C13—C12—C15120.74 (16)
C4—C3—C2116.75 (15)C11—C12—C15120.80 (16)
C4—C3—H3121.6C14—C13—C12121.65 (16)
C2—C3—H3121.6C14—C13—H13119.2
C3—C4—C5123.29 (15)C12—C13—H13119.2
C3—C4—Cl1118.71 (13)C13—C14—C9119.81 (15)
C5—C4—Cl1118.00 (13)C13—C14—H14120.1
C6—C5—C4120.20 (15)C9—C14—H14120.1
C6—C5—H5119.9C12—C15—H15A109.5
C4—C5—H5119.9C12—C15—H15B109.5
C7—C6—C5116.26 (15)H15A—C15—H15B109.5
C7—C6—H6121.9C12—C15—H15C109.5
C5—C6—H6121.9H15A—C15—H15C109.5
O1—C7—C6125.14 (14)H15B—C15—H15C109.5
O1—C7—C2110.63 (14)S1—C16—H16A109.5
C6—C7—C2124.23 (15)S1—C16—H16B109.5
C1—C8—O1110.51 (14)H16A—C16—H16B109.5
C1—C8—C9133.98 (15)S1—C16—H16C109.5
O1—C8—C9115.51 (13)H16A—C16—H16C109.5
C10—C9—C14118.87 (15)H16B—C16—H16C109.5
O2—S1—C1—C8142.96 (15)C1—C2—C7—C6−179.96 (15)
C16—S1—C1—C8−107.64 (15)C2—C1—C8—O1−0.17 (17)
O2—S1—C1—C2−29.09 (16)S1—C1—C8—O1−173.43 (11)
C16—S1—C1—C280.31 (15)C2—C1—C8—C9−179.34 (16)
C8—C1—C2—C7−0.40 (17)S1—C1—C8—C97.4 (3)
S1—C1—C2—C7172.92 (12)C7—O1—C8—C10.68 (17)
C8—C1—C2—C3179.75 (17)C7—O1—C8—C9−179.99 (12)
S1—C1—C2—C3−6.9 (3)C1—C8—C9—C1029.6 (3)
C7—C2—C3—C4−0.1 (2)O1—C8—C9—C10−149.54 (15)
C1—C2—C3—C4179.69 (16)C1—C8—C9—C14−151.36 (18)
C2—C3—C4—C50.1 (2)O1—C8—C9—C1429.5 (2)
C2—C3—C4—Cl1−179.18 (11)C14—C9—C10—C111.5 (2)
C3—C4—C5—C60.2 (3)C8—C9—C10—C11−179.49 (15)
Cl1—C4—C5—C6179.45 (12)C9—C10—C11—C12−1.0 (3)
C4—C5—C6—C7−0.4 (2)C10—C11—C12—C130.2 (2)
C8—O1—C7—C6179.86 (15)C10—C11—C12—C15179.82 (16)
C8—O1—C7—C2−0.94 (16)C11—C12—C13—C140.3 (2)
C5—C6—C7—O1179.43 (14)C15—C12—C13—C14−179.38 (16)
C5—C6—C7—C20.3 (2)C12—C13—C14—C90.2 (2)
C3—C2—C7—O1−179.29 (13)C10—C9—C14—C13−1.0 (2)
C1—C2—C7—O10.83 (17)C8—C9—C14—C13179.91 (14)
C3—C2—C7—C6−0.1 (2)
D—H···AD—HH···AD···AD—H···A
C14—H14···O2i0.952.543.436 (2)158
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C14—H14⋯O2i 0.952.543.436 (2)158

Symmetry code: (i) .

  7 in total

1.  Benzofurans and another constituent from seeds of Styrax officinalis.

Authors:  Yurdanur Yayla Akgul; Huseyin Anil
Journal:  Phytochemistry       Date:  2003-08       Impact factor: 4.072

2.  A new structural alternative in benzo[b]furans for antimicrobial activity.

Authors:  M Wahab Khan; M Jahangir Alam; M A Rashid; R Chowdhury
Journal:  Bioorg Med Chem       Date:  2005-08-15       Impact factor: 3.641

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  Artoindonesianins X and Y, two isoprenylated 2-arylbenzofurans, from Artocarpus fretessi (Moraceae).

Authors:  Nunuk H Soekamto; Sjamsul A Achmad; Emilio L Ghisalberti; Euis H Hakim; Yana M Syah
Journal:  Phytochemistry       Date:  2003-10       Impact factor: 4.072

5.  5-Chloro-2-(4-fluoro-phen-yl)-3-methyl-sulfinyl-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-10-03

6.  Synthesis of potent antitumor and antiviral benzofuran derivatives.

Authors:  Shadia A Galal; Amira S Abd El-All; Mohamed M Abdallah; Hoda I El-Diwani
Journal:  Bioorg Med Chem Lett       Date:  2009-03-21       Impact factor: 2.823

7.  Antibacterial and antifungal activity of cicerfuran and related 2-arylbenzofurans and stilbenes.

Authors:  Shazia N Aslam; Philip C Stevenson; Tetsuo Kokubun; David R Hall
Journal:  Microbiol Res       Date:  2007-04-05       Impact factor: 5.415

  7 in total

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