Literature DB >> 24109291

catena-Poly[ammonium [aqua-bis-(μ-2,3,5,6-tetra-oxo-4-nitro-pyridin-4-ido)argentate(I)]].

Nguyen Dinh Do1, Olga Kovalchukova, Adam Stash, Svetlana Strashnova.   

Abstract

In the title compound, {(NH4)[Ag(C5HN2O6)2(H2O)]} n , the Ag(I) cation is seven-coordinated and is surrounded by four oxo O atoms of the 2,3,5,6-tetra-oxo-4-nitro-pyridin-4-ide species [Ag-O = 2.3848 (19), 2.4931 (18), 2.5361 (18) and 2.573 (2) Å], two nitro O atoms [Ag-O = 2.644 (2) and 2.661 (2) Å], and one water mol-ecule [Ag-O = 2.3133 (19) Å]. The pyridin-4-ide mono-anions act as polydentate bridging ligands and form a three-dimensional network that is stabilized through O-H⋯O and N-H⋯O hydrogen bonds involving the coordinating water mol-ecule and the imide function as donator groups. The ammonium cations are located in the cavities of the framework and are also involved in hydrogen bonding to O atoms of the ligand.

Entities:  

Year:  2013        PMID: 24109291      PMCID: PMC3793704          DOI: 10.1107/S1600536813020631

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For reviews of 1,2-dicarbonyl compounds, see: Aldoshin (2008 ▶); Ohba & Okawa (2000 ▶). The synthesis and crystal structures of ammonium and sodium 2,3,5,6-tetra­oxo-4-nitro­pyridinates have been reported previously (Palkina et al., 2000 ▶; Kuzmina et al., 2004 ▶). The structure of the organic anion in its hexa­aqua metal salts is described by Kovalchukova et al. (2003 ▶ and 2013 ▶). For references to related structures of metal complexes with cyclic polyoxo compounds, see: Coronado et al. (2007 ▶); Kitagawa & Kawata (2002 ▶).

Experimental

Crystal data

(NH4)[Ag(C5HN2O6)2(H2O)] M = 514.08 Monoclinic, a = 8.784 (2) Å b = 18.551 (4) Å c = 9.195 (2) Å β = 90.70 (3)° V = 1498.2 (5) Å3 Z = 4 Mo Kα radiation μ = 1.44 mm−1 T = 293 K 0.35 × 0.31 × 0.08 mm

Data collection

Enraf Nonius CAD-4 diffractometer Absorption correction: part of the refinement model (ΔF) (Walker & Stuart, 1983 ▶) T min = 0.406, T max = 0.798 2952 measured reflections 2768 independent reflections 2094 reflections with I > 2σ(I) R int = 0.014 3 standard reflections every 60 min intensity decay: none

Refinement

R[F 2 > 2σ(F 2)] = 0.021 wR(F 2) = 0.066 S = 1.09 2768 reflections 283 parameters 11 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.42 e Å−3 Δρmin = −0.58 e Å−3 Data collection: CAD-4-PC (Enraf–Nonius, 1993 ▶); cell refinement: CAD-4-PC; data reduction: CAD-4-PC; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: CIFTAB97 and SHELXL97. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536813020631/pj2004sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813020631/pj2004Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
(NH4)[Ag(C5HN2O6)2(H2O)]F(000) = 1016
Mr = 514.08Dx = 2.279 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 25 reflections
a = 8.784 (2) Åθ = 9.3–11.8°
b = 18.551 (4) ŵ = 1.44 mm1
c = 9.195 (2) ÅT = 293 K
β = 90.70 (3)°Plate, dark yellow
V = 1498.2 (5) Å30.35 × 0.31 × 0.08 mm
Z = 4
Enraf Nonius CAD-4 diffractometer2094 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.014
β-filter monochromatorθmax = 25.5°, θmin = 2.2°
ω/2θ scansh = 0→10
Absorption correction: part of the refinement model (ΔF) Walker & Stuart (1983)k = 0→22
Tmin = 0.406, Tmax = 0.798l = −11→11
2952 measured reflections3 standard reflections every 60 min
2768 independent reflections intensity decay: none
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.021Hydrogen site location: difference Fourier map
wR(F2) = 0.066H atoms treated by a mixture of independent and constrained refinement
S = 1.09w = 1/[σ2(Fo2) + (0.0451P)2 + 0.0506P] where P = (Fo2 + 2Fc2)/3
2768 reflections(Δ/σ)max = 0.001
283 parametersΔρmax = 0.42 e Å3
11 restraintsΔρmin = −0.58 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Ag10.68914 (2)0.518350 (10)0.16959 (2)0.03092 (9)
O10.6981 (2)0.43383 (10)−0.0151 (2)0.0367 (4)
O20.49428 (18)0.55092 (10)0.3355 (2)0.0337 (4)
O30.2721 (2)0.64390 (10)0.3252 (3)0.0437 (5)
O5−0.0852 (2)0.46912 (11)0.3204 (2)0.0430 (5)
O60.1206 (2)0.36677 (10)0.3468 (2)0.0380 (4)
O710.4081 (2)0.33294 (10)0.3308 (2)0.0374 (4)
O720.5781 (2)0.41601 (11)0.3380 (3)0.0434 (5)
O80.59699 (19)0.87943 (10)0.5161 (2)0.0346 (4)
O90.40503 (19)0.77524 (10)0.4454 (2)0.0371 (4)
O110.7861 (2)0.62851 (10)0.3053 (2)0.0335 (4)
O120.99467 (19)0.72206 (10)0.3830 (2)0.0361 (4)
O1311.0495 (2)0.83839 (10)0.5427 (3)0.0440 (5)
O1320.8913 (2)0.92310 (9)0.4915 (2)0.0337 (4)
N21.1853 (2)0.79954 (14)0.1619 (3)0.0356 (5)
N40.0902 (2)0.55773 (12)0.3224 (2)0.0277 (4)
H40.02000.59000.31740.033*
N70.4426 (2)0.39746 (11)0.3354 (2)0.0255 (4)
N100.5921 (2)0.70207 (10)0.3659 (2)0.0234 (4)
H100.52630.67180.33240.028*
N130.9224 (2)0.85893 (11)0.5015 (2)0.0250 (4)
C10.3262 (2)0.45034 (14)0.3364 (2)0.0232 (5)
C20.3668 (3)0.52426 (12)0.3337 (2)0.0230 (4)
C30.2389 (3)0.58051 (13)0.3276 (3)0.0267 (5)
C50.0468 (3)0.48715 (13)0.3246 (3)0.0264 (5)
C60.1700 (3)0.42790 (13)0.3368 (2)0.0243 (5)
C70.8114 (2)0.80583 (12)0.4653 (2)0.0219 (4)
C80.6544 (2)0.82305 (12)0.4741 (2)0.0212 (4)
C90.5389 (3)0.76440 (13)0.4277 (2)0.0236 (5)
C110.7427 (3)0.68490 (12)0.3543 (2)0.0222 (4)
C120.8630 (3)0.74009 (12)0.4048 (2)0.0222 (4)
H110.768 (3)0.4067 (17)−0.019 (5)0.074 (6)*
H120.624 (3)0.4089 (17)−0.015 (5)0.074 (6)*
H211.109 (3)0.8260 (14)0.166 (4)0.074 (6)*
H221.263 (3)0.8246 (14)0.176 (4)0.074 (6)*
H231.182 (4)0.7675 (14)0.225 (3)0.074 (6)*
H241.190 (4)0.7813 (16)0.080 (2)0.074 (6)*
U11U22U33U12U13U23
Ag10.03248 (13)0.03008 (13)0.03023 (13)−0.00021 (7)0.00124 (8)−0.00114 (8)
O10.0281 (9)0.0371 (10)0.0449 (11)−0.0023 (8)0.0016 (8)−0.0077 (8)
O20.0202 (8)0.0337 (9)0.0471 (11)−0.0027 (7)0.0010 (7)−0.0058 (8)
O30.0299 (9)0.0264 (9)0.0747 (15)0.0000 (8)−0.0052 (9)−0.0102 (9)
O50.0197 (9)0.0485 (11)0.0607 (13)−0.0068 (8)−0.0051 (8)0.0142 (10)
O60.0330 (9)0.0325 (10)0.0485 (11)−0.0067 (7)−0.0014 (8)0.0053 (8)
O710.0462 (11)0.0284 (9)0.0374 (10)0.0044 (8)−0.0032 (8)0.0019 (8)
O720.0233 (9)0.0408 (10)0.0662 (14)0.0076 (8)0.0017 (9)0.0079 (10)
O80.0241 (8)0.0340 (9)0.0455 (11)0.0061 (7)−0.0065 (8)−0.0150 (8)
O90.0189 (9)0.0374 (10)0.0551 (12)−0.0008 (7)0.0040 (8)−0.0096 (9)
O110.0280 (9)0.0327 (10)0.0398 (10)0.0029 (7)−0.0013 (7)−0.0140 (8)
O120.0204 (9)0.0394 (10)0.0484 (11)0.0035 (7)0.0034 (8)−0.0105 (8)
O1310.0251 (9)0.0359 (10)0.0707 (14)−0.0020 (8)−0.0166 (9)−0.0045 (9)
O1320.0338 (9)0.0223 (9)0.0451 (11)−0.0026 (7)0.0010 (8)−0.0044 (7)
N20.0285 (11)0.0406 (13)0.0376 (13)−0.0039 (9)−0.0015 (9)−0.0011 (10)
N40.0200 (9)0.0316 (10)0.0313 (11)0.0040 (8)−0.0017 (8)0.0003 (9)
N70.0291 (10)0.0305 (11)0.0168 (9)0.0042 (8)−0.0014 (7)0.0022 (8)
N100.0193 (9)0.0257 (10)0.0253 (10)−0.0024 (7)−0.0025 (7)−0.0033 (8)
N130.0232 (9)0.0284 (10)0.0234 (10)−0.0014 (8)−0.0005 (7)−0.0030 (8)
C10.0214 (11)0.0304 (12)0.0178 (11)0.0023 (9)−0.0015 (8)−0.0002 (9)
C20.0195 (10)0.0311 (12)0.0183 (10)−0.0002 (9)0.0004 (8)−0.0034 (9)
C30.0244 (11)0.0291 (13)0.0266 (12)−0.0007 (10)−0.0020 (9)−0.0059 (9)
C50.0234 (11)0.0356 (13)0.0202 (11)−0.0018 (10)−0.0018 (8)0.0029 (10)
C60.0245 (11)0.0300 (12)0.0184 (11)−0.0022 (9)−0.0013 (9)0.0011 (9)
C70.0211 (11)0.0239 (10)0.0204 (11)−0.0023 (9)−0.0028 (8)0.0001 (9)
C80.0197 (10)0.0250 (11)0.0187 (10)0.0006 (8)−0.0022 (8)−0.0022 (9)
C90.0221 (11)0.0269 (11)0.0218 (11)−0.0003 (9)−0.0013 (9)−0.0024 (9)
C110.0250 (11)0.0257 (11)0.0157 (10)0.0020 (9)−0.0015 (8)−0.0002 (9)
C120.0202 (11)0.0257 (11)0.0207 (10)0.0020 (9)0.0001 (8)0.0005 (9)
Ag1—O12.3133 (19)O132—N131.225 (3)
Ag1—O22.3848 (19)O132—Ag1iv2.661 (2)
Ag1—O8i2.4931 (18)N2—H210.832 (19)
Ag1—O112.5361 (18)N2—H220.83 (2)
Ag1—O5ii2.573 (2)N2—H230.830 (19)
Ag1—O722.644 (2)N2—H240.827 (19)
Ag1—O132i2.661 (2)N4—C51.364 (3)
O1—H110.80 (3)N4—C31.373 (3)
O1—H120.80 (3)N4—H40.8600
O2—C21.224 (3)N7—C11.417 (3)
O3—C31.212 (3)N10—C111.366 (3)
O5—C51.206 (3)N10—C91.373 (3)
O5—Ag1iii2.573 (2)N10—H100.8600
O6—C61.218 (3)N13—C71.423 (3)
O71—N71.235 (3)C1—C21.417 (3)
O72—N71.239 (3)C1—C61.434 (3)
O8—C81.225 (3)C2—C31.534 (3)
O8—Ag1iv2.4931 (18)C5—C61.546 (3)
O9—C91.206 (3)C7—C121.417 (3)
O11—C111.203 (3)C7—C81.419 (3)
O12—C121.223 (3)C8—C91.544 (3)
O131—N131.235 (3)C11—C121.539 (3)
O1—Ag1—O2132.26 (6)C5—N4—H4117.9
O1—Ag1—O2132.26 (6)C3—N4—H4117.9
O2—Ag1—O20.00 (5)O71—N7—O72120.3 (2)
O1—Ag1—O8i96.52 (7)O71—N7—C1119.6 (2)
O2—Ag1—O8i86.50 (7)O72—N7—C1120.0 (2)
O2—Ag1—O8i86.50 (7)C11—N10—C9124.3 (2)
O1—Ag1—O11153.27 (7)C11—N10—H10117.8
O2—Ag1—O1173.76 (6)C9—N10—H10117.8
O2—Ag1—O1173.76 (6)O132—N13—O131121.6 (2)
O8i—Ag1—O1176.73 (7)O132—N13—C7120.24 (19)
O1—Ag1—O5ii97.02 (7)O131—N13—C7118.21 (19)
O2—Ag1—O5ii107.42 (7)N7—C1—C2119.23 (19)
O2—Ag1—O5ii107.42 (7)N7—C1—C6119.3 (2)
O8i—Ag1—O5ii144.87 (6)C2—C1—C6121.5 (2)
O11—Ag1—O5ii76.64 (7)O2—C2—O20.00 (16)
O1—Ag1—O7287.67 (7)O2—C2—C1128.4 (2)
O2—Ag1—O7262.25 (7)O2—C2—C1128.4 (2)
O2—Ag1—O7262.25 (7)O2—C2—C3113.3 (2)
O8i—Ag1—O72139.31 (6)O2—C2—C3113.3 (2)
O11—Ag1—O72114.48 (7)C1—C2—C3118.3 (2)
O5ii—Ag1—O7273.55 (6)O3—C3—O30.0 (2)
O1—Ag1—O132i78.24 (6)O3—C3—N4121.8 (2)
O2—Ag1—O132i141.23 (6)O3—C3—N4121.8 (2)
O2—Ag1—O132i141.23 (6)O3—C3—C2119.0 (2)
O8i—Ag1—O132i63.63 (6)O3—C3—C2119.0 (2)
O11—Ag1—O132i75.60 (6)N4—C3—C2119.2 (2)
O5ii—Ag1—O132i87.76 (6)O5—C5—N4122.3 (2)
O72—Ag1—O132i155.09 (5)O5—C5—C6118.5 (2)
Ag1—O1—H11120 (3)N4—C5—C6119.2 (2)
Ag1—O1—H12111 (3)O6—C6—C1127.8 (2)
H11—O1—H12105.3 (9)O6—C6—C5114.7 (2)
O2—O2—C20 (10)C1—C6—C5117.6 (2)
O2—O2—Ag10 (6)C12—C7—C8122.1 (2)
C2—O2—Ag1123.54 (16)C12—C7—N13117.8 (2)
O3—O3—C30 (10)C8—C7—N13119.65 (19)
C5—O5—Ag1iii130.73 (17)O8—C8—C7127.9 (2)
N7—O72—Ag1123.30 (16)O8—C8—C9114.66 (19)
C8—O8—Ag1iv134.07 (15)C7—C8—C9117.45 (19)
C11—O11—Ag1141.17 (16)O9—C9—N10122.3 (2)
N13—O132—Ag1iv120.06 (15)O9—C9—C8118.9 (2)
H21—N2—H22108.8 (9)N10—C9—C8118.83 (19)
H21—N2—H23111 (3)O11—C11—N10122.9 (2)
H22—N2—H23109.0 (9)O11—C11—C12118.2 (2)
H21—N2—H24109.7 (9)N10—C11—C12118.9 (2)
H22—N2—H24108 (3)O12—C12—C7127.4 (2)
H23—N2—H24110.0 (9)O12—C12—C11114.6 (2)
C5—N4—C3124.1 (2)C7—C12—C11118.00 (19)
D—H···AD—HH···AD···AD—H···A
N4—H4···O11iii0.862.182.979 (3)155
N10—H10···O20.862.262.945 (3)137
N10—H10···O30.862.293.030 (3)144
O1—H11···O131v0.80 (3)2.06 (3)2.851 (3)177 (5)
O1—H12···O8vi0.80 (3)2.02 (3)2.781 (2)160 (3)
N2—H21···O6vii0.83 (2)2.16 (2)2.962 (3)163 (3)
N2—H22···O72viii0.83 (2)2.20 (2)2.998 (3)160 (3)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N4—H4⋯O11i 0.862.182.979 (3)155
N10—H10⋯O20.862.262.945 (3)137
N10—H10⋯O30.862.293.030 (3)144
O1—H11⋯O131ii 0.80 (3)2.06 (3)2.851 (3)177 (5)
O1—H12⋯O8iii 0.80 (3)2.02 (3)2.781 (2)160 (3)
N2—H21⋯O6iv 0.83 (2)2.16 (2)2.962 (3)163 (3)
N2—H22⋯O72v 0.83 (2)2.20 (2)2.998 (3)160 (3)

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .

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