| Literature DB >> 24109268 |
Wojciech Starosta1, Janusz Leciejewicz.
Abstract
In the monomeric title complex, [Li(C4H3N2O2)(H2O)3], the Li(+) cation is coordinated by a pyrazole N atom and three water mol-ecules in a distorted tetra-hedral geometry. The carboxyl-ate group is deprotonated. The complex mol-ecules are involved in O-H⋯O and N-H⋯O hydrogen bonding, forming layers stacked along the b axis.Entities:
Year: 2013 PMID: 24109268 PMCID: PMC3793681 DOI: 10.1107/S160053681301831X
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Li(C4H3N2O2)(H2O)3] | |
| Orthorhombic, | Mo |
| Hall symbol: P 2c -2n | Cell parameters from 25 reflections |
| θ = 6–15° | |
| µ = 0.13 mm−1 | |
| Block, colourless | |
| 0.25 × 0.18 × 0.12 mm |
| Kuma KM4 four-circle diffractometer | 901 reflections with |
| Radiation source: fine-focus sealed tube | |
| Graphite monochromator | θmax = 30.1°, θmin = 2.7° |
| profile data from ω/2θ scan | |
| Absorption correction: analytical ( | |
| 1161 measured reflections | 3 standard reflections every 200 reflections |
| 1161 independent reflections | intensity decay: 5.9% |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 1161 reflections | (Δ/σ)max < 0.001 |
| 133 parameters | Δρmax = 0.34 e Å−3 |
| 7 restraints | Δρmin = −0.44 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O2 | 0.5914 (2) | 0.4578 (3) | 0.32056 (11) | 0.0290 (4) | |
| O1 | 0.7088 (2) | 0.5037 (3) | 0.18706 (12) | 0.0332 (4) | |
| N2 | 0.1533 (3) | 0.4966 (3) | 0.10494 (15) | 0.0333 (5) | |
| C4 | 0.3883 (2) | 0.4946 (3) | 0.20198 (14) | 0.0217 (4) | |
| N1 | 0.0900 (2) | 0.5047 (3) | 0.18846 (14) | 0.0287 (4) | |
| H1 | −0.0246 | 0.5103 | 0.2019 | 0.034* | |
| C6 | 0.5766 (3) | 0.4856 (3) | 0.23794 (14) | 0.0214 (4) | |
| C3 | 0.3351 (3) | 0.4911 (4) | 0.11354 (15) | 0.0335 (5) | |
| H3 | 0.4167 | 0.4856 | 0.0665 | 0.040* | |
| C5 | 0.2250 (3) | 0.5030 (3) | 0.24788 (17) | 0.0281 (4) | |
| H5 | 0.2115 | 0.5067 | 0.3088 | 0.034* | |
| Li1 | 0.0107 (6) | 0.4846 (6) | −0.0115 (3) | 0.0300 (8) | |
| O4 | 0.1074 (2) | 0.6710 (3) | −0.09637 (13) | 0.0299 (4) | |
| O3 | −0.2382 (2) | 0.5471 (3) | 0.01447 (13) | 0.0319 (4) | |
| O5 | 0.0491 (3) | 0.2401 (3) | −0.06531 (17) | 0.0444 (5) | |
| H51 | 0.121 (4) | 0.161 (4) | −0.043 (3) | 0.044 (10)* | |
| H31 | −0.277 (5) | 0.650 (4) | −0.005 (3) | 0.044 (10)* | |
| H42 | 0.043 (4) | 0.751 (4) | −0.123 (2) | 0.039 (9)* | |
| H52 | −0.007 (5) | 0.177 (7) | −0.100 (3) | 0.073 (14)* | |
| H41 | 0.192 (4) | 0.631 (5) | −0.126 (2) | 0.040 (8)* | |
| H32 | −0.275 (6) | 0.554 (7) | 0.0665 (16) | 0.055 (12)* |
| O2 | 0.0241 (7) | 0.0453 (9) | 0.0177 (6) | 0.0001 (6) | −0.0027 (6) | 0.0022 (6) |
| O1 | 0.0169 (7) | 0.0595 (11) | 0.0230 (8) | 0.0000 (6) | 0.0001 (6) | 0.0051 (7) |
| N2 | 0.0198 (8) | 0.0599 (13) | 0.0203 (8) | 0.0004 (8) | −0.0028 (8) | 0.0006 (8) |
| C4 | 0.0149 (7) | 0.0327 (10) | 0.0176 (9) | 0.0008 (6) | −0.0011 (7) | 0.0013 (7) |
| N1 | 0.0162 (7) | 0.0465 (11) | 0.0236 (10) | 0.0002 (6) | −0.0010 (7) | 0.0021 (7) |
| C6 | 0.0160 (7) | 0.0279 (8) | 0.0203 (9) | 0.0007 (6) | −0.0023 (7) | 0.0007 (7) |
| C3 | 0.0186 (9) | 0.0639 (15) | 0.0180 (11) | 0.0019 (9) | −0.0011 (8) | 0.0004 (10) |
| C5 | 0.0175 (8) | 0.0458 (12) | 0.0210 (9) | 0.0004 (8) | −0.0010 (8) | 0.0012 (8) |
| Li1 | 0.0259 (15) | 0.0370 (18) | 0.0270 (18) | 0.0004 (14) | 0.0000 (16) | 0.0022 (15) |
| O4 | 0.0282 (7) | 0.0381 (9) | 0.0235 (6) | 0.0039 (6) | 0.0062 (7) | 0.0043 (6) |
| O3 | 0.0277 (7) | 0.0433 (9) | 0.0248 (8) | 0.0045 (6) | 0.0015 (6) | 0.0026 (8) |
| O5 | 0.0602 (13) | 0.0355 (9) | 0.0376 (9) | 0.0057 (9) | −0.0118 (10) | −0.0080 (8) |
| O2—C6 | 1.274 (3) | C5—H5 | 0.9300 |
| O1—C6 | 1.240 (3) | Li1—O3 | 1.905 (5) |
| N2—C3 | 1.331 (3) | Li1—O5 | 1.909 (4) |
| N2—N1 | 1.350 (3) | Li1—O4 | 1.960 (5) |
| Li1—N2 | 2.053 (5) | O4—H42 | 0.835 (19) |
| C4—C5 | 1.379 (3) | O4—H41 | 0.813 (19) |
| C4—C3 | 1.398 (3) | O3—H31 | 0.823 (19) |
| C4—C6 | 1.478 (3) | O3—H32 | 0.84 (2) |
| N1—C5 | 1.334 (3) | O5—H51 | 0.829 (19) |
| N1—H1 | 0.8600 | O5—H52 | 0.80 (2) |
| C3—H3 | 0.9300 | ||
| C3—N2—N1 | 104.39 (18) | C4—C5—H5 | 126.5 |
| C3—N2—Li1 | 125.9 (2) | O3—Li1—O5 | 115.6 (2) |
| N1—N2—Li1 | 129.66 (19) | O3—Li1—O4 | 109.1 (2) |
| C5—C4—C3 | 104.33 (18) | O5—Li1—O4 | 104.9 (2) |
| C5—C4—C6 | 128.0 (2) | O3—Li1—N2 | 107.0 (2) |
| C3—C4—C6 | 127.69 (19) | O5—Li1—N2 | 109.3 (2) |
| C5—N1—N2 | 112.55 (18) | O4—Li1—N2 | 110.9 (2) |
| C5—N1—H1 | 123.7 | Li1—O4—H42 | 124 (2) |
| N2—N1—H1 | 123.7 | Li1—O4—H41 | 114 (3) |
| O1—C6—O2 | 124.3 (2) | H42—O4—H41 | 112 (4) |
| O1—C6—C4 | 119.05 (19) | Li1—O3—H31 | 117 (3) |
| O2—C6—C4 | 116.66 (19) | Li1—O3—H32 | 121 (3) |
| N2—C3—C4 | 111.67 (19) | H31—O3—H32 | 100 (4) |
| N2—C3—H3 | 124.2 | Li1—O5—H51 | 121 (3) |
| C4—C3—H3 | 124.2 | Li1—O5—H52 | 134 (4) |
| N1—C5—C4 | 107.1 (2) | H51—O5—H52 | 103 (5) |
| N1—C5—H5 | 126.5 |
| H··· | ||||
| O3—H32···O1i | 0.84 (2) | 1.87 (3) | 2.666 (3) | 159 (4) |
| O4—H41···O2ii | 0.81 (2) | 1.88 (2) | 2.684 (2) | 171 (4) |
| O5—H52···O2iii | 0.80 (2) | 2.04 (3) | 2.813 (3) | 163 (5) |
| O4—H42···O2iv | 0.84 (2) | 1.94 (2) | 2.770 (3) | 174 (4) |
| O3—H31···O4v | 0.82 (2) | 2.05 (3) | 2.820 (3) | 156 (4) |
| O5—H51···O3vi | 0.83 (2) | 1.98 (2) | 2.804 (3) | 172 (4) |
| N1—H1···O1i | 0.86 | 1.96 | 2.776 (3) | 159 |
Selected bond lengths (Å)
| Li1—N2 | 2.053 (5) |
| Li1—O3 | 1.905 (5) |
| Li1—O5 | 1.909 (4) |
| Li1—O4 | 1.960 (5) |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O3—H32⋯O1i | 0.84 (2) | 1.87 (3) | 2.666 (3) | 159 (4) |
| O4—H41⋯O2ii | 0.81 (2) | 1.88 (2) | 2.684 (2) | 171 (4) |
| O5—H52⋯O2iii | 0.80 (2) | 2.04 (3) | 2.813 (3) | 163 (5) |
| O4—H42⋯O2iv | 0.84 (2) | 1.94 (2) | 2.770 (3) | 174 (4) |
| O3—H31⋯O4v | 0.82 (2) | 2.05 (3) | 2.820 (3) | 156 (4) |
| O5—H51⋯O3vi | 0.83 (2) | 1.98 (2) | 2.804 (3) | 172 (4) |
| N1—H1⋯O1i | 0.86 | 1.96 | 2.776 (3) | 159 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) .