Literature DB >> 24108623

High-pressure fluorescence applications.

Mariano Dellarole1, Catherine A Royer.   

Abstract

Fluorescence is the most widely used technique to study the effect of pressure on biochemical systems. The use of pressure as a physical variable sheds light into volumetric characteristics of reactions. Here we focus on the effect of pressure on protein solutions using a simple unfolding example in order to illustrate the applications of the methodology. Topics covered in this review include the relationships between practical aspects and technical limitations; the effect of pressure and the study of protein cavities; the interpretation of thermodynamic and relaxation kinetics; and the study of relaxation amplitudes. Finally, we discuss the insights available from the combination of fluorescence and other methods adapted to high pressure, such as SAXS or NMR. Because of the simplicity and accessibility of high-pressure fluorescence, the technique is a starting point that complements appropriately multi-methodological approaches related to understanding protein function, disfunction, and folding from the volumetric point of view.

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Year:  2014        PMID: 24108623     DOI: 10.1007/978-1-62703-649-8_4

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  4 in total

1.  The consequences of cavity creation on the folding landscape of a repeat protein depend upon context.

Authors:  Kelly A Jenkins; Martin J Fossat; Siwen Zhang; Durgesh K Rai; Sean Klein; Richard Gillilan; Zackary White; Grayson Gerlich; Scott A McCallum; Roland Winter; Sol M Gruner; Doug Barrick; Catherine A Royer
Journal:  Proc Natl Acad Sci U S A       Date:  2018-08-13       Impact factor: 11.205

2.  Hidden intermediates in Mango III RNA aptamer folding revealed by pressure perturbation.

Authors:  Balasubramanian Harish; Jinqiu Wang; Eric J Hayden; Bastian Grabe; Wolf Hiller; Roland Winter; Catherine A Royer
Journal:  Biophys J       Date:  2021-12-28       Impact factor: 4.033

Review 3.  Combining High-Pressure Perturbation with NMR Spectroscopy for a Structural and Dynamical Characterization of Protein Folding Pathways.

Authors:  Cécile Dubois; Isaline Herrada; Philippe Barthe; Christian Roumestand
Journal:  Molecules       Date:  2020-11-26       Impact factor: 4.411

4.  Molecular basis for bacterial peptidoglycan recognition by LysM domains.

Authors:  Stéphane Mesnage; Mariano Dellarole; Nicola J Baxter; Jean-Baptiste Rouget; Jordan D Dimitrov; Ning Wang; Yukari Fujimoto; Andrea M Hounslow; Sébastien Lacroix-Desmazes; Koichi Fukase; Simon J Foster; Michael P Williamson
Journal:  Nat Commun       Date:  2014-06-30       Impact factor: 14.919

  4 in total

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