Literature DB >> 24108582

Molecular component distribution imaging of living cells by multivariate curve resolution analysis of space-resolved Raman spectra.

Masahiro Ando1, Hiro-o Hamaguchi.   

Abstract

Label-free Raman microspectroscopy combined with a multivariate curve resolution (MCR) analysis can be a powerful tool for studying a wide range of biomedical molecular systems. The MCR with the alternating least squares (MCR-ALS) technique, which retrieves the pure component spectra from complicatedly overlapped spectra, has been successfully applied to in vivo and molecular-level analysis of living cells. The principles of the MCR-ALS analysis are reviewed with a model system of titanium oxide crystal polymorphs, followed by two examples of in vivo Raman imaging studies of living yeast cells, fission yeast, and budding yeast. Due to the non-negative matrix factorization algorithm used in the MCR-ALS analysis, the spectral information derived from this technique is just ready for physical and/or chemical interpretations. The corresponding concentration profiles provide the molecular component distribution images (MCDIs) that are vitally important for elucidating life at the molecular level, as stated by Schroedinger in his famous book, "What is life?" Without any a priori knowledge about spectral profiles, time- and space-resolved Raman measurements of a dividing fission yeast cell with the MCR-ALS elucidate the dynamic changes of major cellular components (lipids, proteins, and polysaccharides) during the cell cycle. The MCR-ALS technique also resolves broadly overlapped OH stretch Raman bands of water, clearly indicating the existence of organelle-specific water structures in a living budding yeast cell.

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Year:  2014        PMID: 24108582     DOI: 10.1117/1.JBO.19.1.011016

Source DB:  PubMed          Journal:  J Biomed Opt        ISSN: 1083-3668            Impact factor:   3.170


  9 in total

1.  On-site Direct Detection of Astaxanthin from Salmon Fillet Using Raman Spectroscopy.

Authors:  Jun-Ichi Hikima; Masahiro Ando; Hiro-O Hamaguchi; Masahiro Sakai; Masashi Maita; Kazunaga Yazawa; Haruko Takeyama; Takashi Aoki
Journal:  Mar Biotechnol (NY)       Date:  2017-04-04       Impact factor: 3.619

2.  Label-free Chemical Imaging of Fungal Spore Walls by Raman Microscopy and Multivariate Curve Resolution Analysis.

Authors:  Hemanth Noothalapati; Takahiro Sasaki; Tomohiro Kaino; Makoto Kawamukai; Masahiro Ando; Hiro-O Hamaguchi; Tatsuyuki Yamamoto
Journal:  Sci Rep       Date:  2016-06-09       Impact factor: 4.379

3.  Parallelized shifted-excitation Raman difference spectroscopy for fluorescence rejection in a temporary varying system.

Authors:  Rintaro Shimada; Takashi Nakamura; Takeaki Ozawa
Journal:  J Biophotonics       Date:  2019-08-28       Impact factor: 3.207

4.  Deuterium-labeled Raman tracking of glucose accumulation and protein metabolic dynamics in Aspergillus nidulans hyphal tips.

Authors:  Mitsuru Yasuda; Norio Takeshita; Shinsuke Shigeto
Journal:  Sci Rep       Date:  2021-01-14       Impact factor: 4.379

5.  Intra-Ramanome Correlation Analysis Unveils Metabolite Conversion Network from an Isogenic Population of Cells.

Authors:  Yuehui He; Shi Huang; Peng Zhang; Yuetong Ji; Jian Xu
Journal:  mBio       Date:  2021-08-31       Impact factor: 7.867

6.  Oral administration of Blautia wexlerae ameliorates obesity and type 2 diabetes via metabolic remodeling of the gut microbiota.

Authors:  Koji Hosomi; Mayu Saito; Jonguk Park; Haruka Murakami; Naoko Shibata; Masahiro Ando; Takahiro Nagatake; Kana Konishi; Harumi Ohno; Kumpei Tanisawa; Attayeb Mohsen; Yi-An Chen; Hitoshi Kawashima; Yayoi Natsume-Kitatani; Yoshimasa Oka; Hidenori Shimizu; Mari Furuta; Yoko Tojima; Kento Sawane; Azusa Saika; Saki Kondo; Yasunori Yonejima; Haruko Takeyama; Akira Matsutani; Kenji Mizuguchi; Motohiko Miyachi; Jun Kunisawa
Journal:  Nat Commun       Date:  2022-08-18       Impact factor: 17.694

7.  When cells divide: Label-free multimodal spectral imaging for exploratory molecular investigation of living cells during cytokinesis.

Authors:  Jen-Fang Hsu; Pei-Ying Hsieh; Hsin-Yun Hsu; Shinsuke Shigeto
Journal:  Sci Rep       Date:  2015-12-03       Impact factor: 4.379

8.  Automatic and objective oral cancer diagnosis by Raman spectroscopic detection of keratin with multivariate curve resolution analysis.

Authors:  Po-Hsiung Chen; Rintaro Shimada; Sohshi Yabumoto; Hajime Okajima; Masahiro Ando; Chiou-Tzu Chang; Li-Tzu Lee; Yong-Kie Wong; Arthur Chiou; Hiro-o Hamaguchi
Journal:  Sci Rep       Date:  2016-01-25       Impact factor: 4.379

9.  Raman microspectroscopy and Raman imaging reveal biomarkers specific for thoracic aortic aneurysms.

Authors:  Kaori Sugiyama; Julia Marzi; Julia Alber; Eva M Brauchle; Masahiro Ando; Yoshito Yamashiro; Bhama Ramkhelawon; Katja Schenke-Layland; Hiromi Yanagisawa
Journal:  Cell Rep Med       Date:  2021-04-28
  9 in total

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