Literature DB >> 24107477

Study of VSX1 mutations in patients with keratoconus in southwest Iran using PCR-single-strand conformation polymorphism/heteroduplex analysis and sequencing method.

Fatemeh Azadegan Dehkordi1, Ahmad Rashki, Nader Bagheri, Minoo Hashemzadeh Chaleshtori, Ezzatollah Memarzadeh, Ali Salehi, Homan Ghatreh, Farid Zandi, Nasrin Yazdanpanahi, Mohammad Amin Tabatabaiefar, Morteza Hashemzadeh Chaleshtori.   

Abstract

OBJECTIVE: Keratoconus (KC) is an eye disorder in which the cornea is swollen, thinned and deformed. Despite extensive studies, the pathophysiological processes and genetic etiology of KC are unknown. The disease incidence is approximately 1 in 2,000, and it is the most common cause of corneal transplantation in the USA. Many genes are involved in the disease, but evidence suggests a major role for VSX1 in the etiology of KC. This study aimed to determine the frequency of mutations in exons 2, 3 and 4 of the VSX1 gene in Chaharmahal va Bakhtiari province in the southwest of Iran. STUDY
DESIGN: In this experimental study, mutations in 3 exons, namely exons 2, 3 and 4, of VSX1 were investigated in 50 patients with KC and 50 healthy control subjects. DNA was extracted using a standard phenol-chloroform method. PCR-single-strand conformational polymorphism/heteroduplex analysis was performed, followed by DNA sequencing to confirm the identified motility shifts.
RESULTS: H244R mutations were found in 1 patient and also in 1 healthy control subject. Furthermore, 12 polymorphisms were identified in patients with KC and 7 in healthy control subjects [rs6138482 and c.546A>G (rs12480307)].
CONCLUSION: Our investigation showed that KC-related VSX1 mutations were found in a very small proportion of the studied patients from Iran. Further investigations on other genes are needed to clarify their roles in KC pathogenesis.

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Year:  2013        PMID: 24107477     DOI: 10.1159/000353297

Source DB:  PubMed          Journal:  Acta Cytol        ISSN: 0001-5547            Impact factor:   2.319


  9 in total

1.  Developments in Ocular Genetics: 2013 Annual Review.

Authors:  Inas F Aboobakar; R Rand Allingham
Journal:  Asia Pac J Ophthalmol (Phila)       Date:  2014 May-Jun

2.  Two novel missense substitutions in the VSX1 gene: clinical and genetic analysis of families with Keratoconus from India.

Authors:  Rohit Shetty; Rudy M M A Nuijts; Soumya Ganesh Nanaiah; Venkata Ramana Anandula; Arkasubhra Ghosh; Chaitra Jayadev; Natasha Pahuja; Govindasamy Kumaramanickavel; Jeyabalan Nallathambi
Journal:  BMC Med Genet       Date:  2015-05-12       Impact factor: 2.103

Review 3.  Genomic strategies to understand causes of keratoconus.

Authors:  Justyna A Karolak; Marzena Gajecka
Journal:  Mol Genet Genomics       Date:  2016-12-28       Impact factor: 3.291

4.  TSC1 Mutations in Keratoconus Patients With or Without Tuberous Sclerosis.

Authors:  Yelena Bykhovskaya; Majid Fardaei; Mariam Lotfy Khaled; Mahmood Nejabat; Ramin Salouti; Hassan Dastsooz; Yutao Liu; Soroor Inaloo; Yaron S Rabinowitz
Journal:  Invest Ophthalmol Vis Sci       Date:  2017-12-01       Impact factor: 4.799

5.  Analysis of the VSX1 gene in sporadic keratoconus patients from China.

Authors:  Tao Guan; Xue Wang; Li-Bin Zheng; Hai-Jian Wu; Yu-Feng Yao
Journal:  BMC Ophthalmol       Date:  2017-09-26       Impact factor: 2.209

6.  Analysis of VSX1 Variations in Brazilian Subjects with Keratoconus.

Authors:  Dulceria Costa da Silva; Bianca Nery Benevides Gadelha; Alex Felipe Barbosa Feitosa; Rafaela Gomes da Silva; Tarsila Livia Paz E Albuquerque; Débora Christina Pereira Fernandes Santos; Diego Nery Benevides Gadelha; Bruno Luiz Fonseca Schamber-Reis
Journal:  J Ophthalmic Vis Res       Date:  2018 Jul-Sep

7.  Rare, potentially pathogenic variants in 21 keratoconus candidate genes are not enriched in cases in a large Australian cohort of European descent.

Authors:  Sionne E M Lucas; Tiger Zhou; Nicholas B Blackburn; Richard A Mills; Jonathan Ellis; Paul Leo; Emmanuelle Souzeau; Bronwyn Ridge; Jac C Charlesworth; Richard Lindsay; Jamie E Craig; Kathryn P Burdon
Journal:  PLoS One       Date:  2018-06-20       Impact factor: 3.240

8.  Mutations in GJB2 as Major Causes of Autosomal Recessive Non-Syndromic Hearing Loss: First Report of c.299-300delAT Mutation in Kurdish Population of Iran.

Authors:  Fatemeh Azadegan-Dehkordi; Tayyebe Bahrami; Maryam Shirzad; Gelareh Karbasi; Nasrin Yazdanpanahi; Effat Farrokhi; Mahbobeh Koohiyan; Mohammad Amin Tabatabaiefar; Morteza Hashemzadeh-Chaleshtori
Journal:  J Audiol Otol       Date:  2018-12-07

9.  Systematically Displaying the Pathogenesis of Keratoconus via Multi-Level Related Gene Enrichment-Based Review.

Authors:  Xiao-Dan Hao; Hua Gao; Wen-Hua Xu; Chan Shan; Ying Liu; Zhi-Xia Zhou; Kun Wang; Pei-Feng Li
Journal:  Front Med (Lausanne)       Date:  2022-01-24
  9 in total

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