Literature DB >> 24105606

Epistatic interactions and drug response.

Britta Weigelt1, Jorge S Reis-Filho.   

Abstract

The advent of massively parallel sequencing has allowed for an unprecedented genetic characterization of cancers, which has revealed not only the complexity of cancer genomes, but also the fact that tumours from the same anatomical site or even of the same histological and/or molecular subtype display distinct constellations of somatic genetic aberrations. Epistatic interactions (ie the interplay between genetic aberrations) are likely to play pivotal roles not only in terms of tumourigenesis and disease progression, but also in response to therapeutic interventions. In this review, we discuss the challenges posed by the complexity of tumour genomes and epistatic interactions, and approaches for harnessing the wealth of genetic information on human cancers for the implementation of precision medicine.
Copyright © 2013 Pathological Society of Great Britain and Ireland. Published by John Wiley & Sons, Ltd.

Entities:  

Keywords:  epistasis; genetic interaction; genotype; massively parallel sequencing; mutation; precision medicine; targeted therapy

Mesh:

Substances:

Year:  2014        PMID: 24105606     DOI: 10.1002/path.4265

Source DB:  PubMed          Journal:  J Pathol        ISSN: 0022-3417            Impact factor:   7.996


  12 in total

1.  Benchmarking mutation effect prediction algorithms using functionally validated cancer-related missense mutations.

Authors:  Luciano G Martelotto; Charlotte Ky Ng; Maria R De Filippo; Yan Zhang; Salvatore Piscuoglio; Raymond S Lim; Ronglai Shen; Larry Norton; Jorge S Reis-Filho; Britta Weigelt
Journal:  Genome Biol       Date:  2014-10-28       Impact factor: 13.583

2.  Lack of PRKD2 and PRKD3 kinase domain somatic mutations in PRKD1 wild-type classic polymorphous low-grade adenocarcinomas of the salivary gland.

Authors:  Salvatore Piscuoglio; Nicola Fusco; Charlotte K Y Ng; Luciano G Martelotto; Arnaud da Cruz Paula; Nora Katabi; Brian P Rubin; Alena Skálová; Ilan Weinreb; Britta Weigelt; Jorge S Reis-Filho
Journal:  Histopathology       Date:  2016-01-04       Impact factor: 5.087

3.  Genetic Heterogeneity in Therapy-Naïve Synchronous Primary Breast Cancers and Their Metastases.

Authors:  Charlotte K Y Ng; Francois-Clement Bidard; Salvatore Piscuoglio; Felipe C Geyer; Raymond S Lim; Ino de Bruijn; Ronglai Shen; Fresia Pareja; Samuel H Berman; Lu Wang; Jean-Yves Pierga; Anne Vincent-Salomon; Agnes Viale; Larry Norton; Brigitte Sigal; Britta Weigelt; Paul Cottu; Jorge S Reis-Filho
Journal:  Clin Cancer Res       Date:  2017-03-28       Impact factor: 12.531

4.  TP53 Mutational Spectrum in Endometrioid and Serous Endometrial Cancers.

Authors:  Anne M Schultheis; Luciano G Martelotto; Maria R De Filippo; Salvatore Piscuglio; Charlotte K Y Ng; Yaser R Hussein; Jorge S Reis-Filho; Robert A Soslow; Britta Weigelt
Journal:  Int J Gynecol Pathol       Date:  2016-07       Impact factor: 2.762

Review 5.  Precision Medicine for Continuing Phenotype Expansion of Human Genetic Diseases.

Authors:  Hui Yu; Victor Wei Zhang
Journal:  Biomed Res Int       Date:  2015-06-07       Impact factor: 3.411

6.  Intra-tumor genetic heterogeneity and alternative driver genetic alterations in breast cancers with heterogeneous HER2 gene amplification.

Authors:  Charlotte K Y Ng; Luciano G Martelotto; Arnaud Gauthier; Huei-Chi Wen; Salvatore Piscuoglio; Raymond S Lim; Catherine F Cowell; Paul M Wilkerson; Patty Wai; Daniel N Rodrigues; Laurent Arnould; Felipe C Geyer; Silvio E Bromberg; Magali Lacroix-Triki; Frederique Penault-Llorca; Sylvia Giard; Xavier Sastre-Garau; Rachael Natrajan; Larry Norton; Paul H Cottu; Britta Weigelt; Anne Vincent-Salomon; Jorge S Reis-Filho
Journal:  Genome Biol       Date:  2015-05-22       Impact factor: 13.583

Review 7.  Breast cancer intra-tumor heterogeneity.

Authors:  Luciano G Martelotto; Charlotte K Y Ng; Salvatore Piscuoglio; Britta Weigelt; Jorge S Reis-Filho
Journal:  Breast Cancer Res       Date:  2014-05-20       Impact factor: 6.466

8.  Genetic analysis of uterine adenosarcomas and phyllodes tumors of the breast.

Authors:  Felipe C Geyer; Kathleen A Burke; Salvatore Piscuoglio; Charlotte K Y Ng; Anastasios D Papanastasiou; Caterina Marchiò; Pier Selenica; Marcia Edelweiss; Melissa P Murray; Edi Brogi; Robert A Soslow; Brian P Rubin; Larry Norton; Jorge S Reis-Filho; Britta Weigelt
Journal:  Mol Oncol       Date:  2017-05-16       Impact factor: 6.603

9.  The somatic molecular evolution of cancer: Mutation, selection, and epistasis.

Authors:  Krishna Dasari; Jason A Somarelli; Sudhir Kumar; Jeffrey P Townsend
Journal:  Prog Biophys Mol Biol       Date:  2021-08-06       Impact factor: 4.799

10.  Widespread epistasis regulates glucose homeostasis and gene expression.

Authors:  Anlu Chen; Yang Liu; Scott M Williams; Nathan Morris; David A Buchner
Journal:  PLoS Genet       Date:  2017-09-29       Impact factor: 5.917

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