Literature DB >> 24103800

Conformations and 3D pharmacophore searching.

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Abstract

Year:  2010        PMID: 24103800     DOI: 10.1016/j.ddtec.2010.10.003

Source DB:  PubMed          Journal:  Drug Discov Today Technol        ISSN: 1740-6749


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  12 in total

1.  Confab - Systematic generation of diverse low-energy conformers.

Authors:  Noel M O'Boyle; Tim Vandermeersch; Christopher J Flynn; Anita R Maguire; Geoffrey R Hutchison
Journal:  J Cheminform       Date:  2011-03-16       Impact factor: 5.514

2.  Accurate and efficient target prediction using a potency-sensitive influence-relevance voter.

Authors:  Alessandro Lusci; Michael Browning; David Fooshee; Joshua Swamidass; Pierre Baldi
Journal:  J Cheminform       Date:  2015-12-29       Impact factor: 5.514

3.  Searching for bioactive conformations of drug-like ligands with current force fields: how good are we?

Authors:  Oya Gürsoy; Martin Smieško
Journal:  J Cheminform       Date:  2017-05-15       Impact factor: 5.514

4.  Conformational Sampling of Small Molecules With iCon: Performance Assessment in Comparison With OMEGA.

Authors:  Giulio Poli; Thomas Seidel; Thierry Langer
Journal:  Front Chem       Date:  2018-06-19       Impact factor: 5.221

5.  Comparative Molecular Dynamics Simulations Provide Insight Into Antibiotic Interactions: A Case Study Using the Enzyme L,L-Diaminopimelate Aminotransferase (DapL).

Authors:  Lily E Adams; Patrick Rynkiewicz; Gregory A Babbitt; Jamie S Mortensen; Rachel A North; Renwick C J Dobson; André O Hudson
Journal:  Front Mol Biosci       Date:  2020-03-24

6.  Molecular Geometry Prediction using a Deep Generative Graph Neural Network.

Authors:  Elman Mansimov; Omar Mahmood; Seokho Kang; Kyunghyun Cho
Journal:  Sci Rep       Date:  2019-12-31       Impact factor: 4.379

7.  Efficient Amino Acid Conformer Search with Bayesian Optimization.

Authors:  Lincan Fang; Esko Makkonen; Milica Todorović; Patrick Rinke; Xi Chen
Journal:  J Chem Theory Comput       Date:  2021-02-12       Impact factor: 6.006

8.  Bifunctional Inhibitors of Influenza Virus Neuraminidase: Molecular Design of a Sulfonamide Linker.

Authors:  Sergei Evteev; Dmitry Nilov; Aleksandra Polenova; Vytas Švedas
Journal:  Int J Mol Sci       Date:  2021-12-03       Impact factor: 5.923

9.  GEOM, energy-annotated molecular conformations for property prediction and molecular generation.

Authors:  Simon Axelrod; Rafael Gómez-Bombarelli
Journal:  Sci Data       Date:  2022-04-21       Impact factor: 8.501

10.  Plane of best fit: a novel method to characterize the three-dimensionality of molecules.

Authors:  Nicholas C Firth; Nathan Brown; Julian Blagg
Journal:  J Chem Inf Model       Date:  2012-09-26       Impact factor: 4.956

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