| Literature DB >> 24098265 |
Sihem Yebedri1, Samira Louhibi, Sofiane Bouacida, Ali Ourari, Thierry Roisnel.
Abstract
In the title hydrate, C17H18N2O5·H2O, the complete organic mol-ecule is generated by a crystallographic mirror plane with one C and one O atom lying on the mirror plane. The O atom of the water mol-ecule has m site symmetry. Two symmetry-related intra-molecular O-H⋯O hydrogen bonds complete S(6) rings in the organic mol-ecule. In the crystal, the components are linked into (010) sheets by O-H⋯O and N-H⋯O hydrogen bonds.Entities:
Year: 2013 PMID: 24098265 PMCID: PMC3790446 DOI: 10.1107/S1600536813026184
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C17H18N2O5·H2O | |
| Orthorhombic, | Mo |
| Hall symbol: -P 2ac 2n | Cell parameters from 951 reflections |
| θ = 3.2–21.6° | |
| µ = 0.11 mm−1 | |
| Prism, yellow | |
| 0.38 × 0.12 × 0.04 mm |
| Bruker APEXII diffractometer | 1195 reflections with |
| Graphite monochromator | |
| CCD rotation images, thin slices scans | θmax = 27.4°, θmin = 3.2° |
| Absorption correction: multi-scan ( | |
| 7880 measured reflections | |
| 1904 independent reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 1904 reflections | (Δ/σ)max < 0.001 |
| 124 parameters | Δρmax = 0.21 e Å−3 |
| 0 restraints | Δρmin = −0.23 e Å−3 |
| Geometry. Bond distances, angles |
| Refinement. Refinement of |
| O1 | 0.39517 (14) | 0.25000 | 0.2499 (4) | 0.0247 (6) | |
| O6 | 0.12018 (10) | 0.17317 (5) | −0.0499 (3) | 0.0305 (5) | |
| O13 | −0.01478 (10) | 0.12722 (5) | 0.2259 (4) | 0.0365 (5) | |
| N4 | 0.29166 (11) | 0.16318 (5) | 0.0274 (3) | 0.0222 (5) | |
| C2 | 0.3155 (2) | 0.25000 | 0.0315 (6) | 0.0220 (8) | |
| C3 | 0.31907 (14) | 0.20435 (6) | −0.1551 (4) | 0.0231 (6) | |
| C5 | 0.19276 (14) | 0.15119 (6) | 0.0789 (4) | 0.0221 (6) | |
| C7 | 0.16854 (13) | 0.11226 (6) | 0.2905 (4) | 0.0211 (6) | |
| C8 | 0.24447 (14) | 0.08491 (6) | 0.4318 (4) | 0.0246 (6) | |
| C9 | 0.21836 (16) | 0.04885 (7) | 0.6277 (5) | 0.0299 (7) | |
| C10 | 0.11462 (16) | 0.03987 (7) | 0.6864 (5) | 0.0324 (7) | |
| C11 | 0.03789 (16) | 0.06622 (7) | 0.5520 (5) | 0.0324 (7) | |
| C12 | 0.06373 (14) | 0.10227 (7) | 0.3538 (5) | 0.0266 (6) | |
| O1W | 0.08072 (15) | 0.25000 | 0.5613 (5) | 0.0345 (7) | |
| H1 | 0.460 (2) | 0.25000 | 0.145 (7) | 0.0370* | |
| H2 | 0.24766 | 0.25000 | 0.13838 | 0.0264* | |
| H3A | 0.26982 | 0.20707 | −0.32177 | 0.0278* | |
| H3B | 0.38959 | 0.20000 | −0.23708 | 0.0278* | |
| H4 | 0.34148 | 0.14581 | 0.10545 | 0.0266* | |
| H8 | 0.31554 | 0.09118 | 0.39263 | 0.0295* | |
| H9 | 0.27095 | 0.03049 | 0.72084 | 0.0359* | |
| H10 | 0.09631 | 0.01526 | 0.82091 | 0.0389* | |
| H11 | −0.03286 | 0.05978 | 0.59456 | 0.0389* | |
| H13 | 0.01003 | 0.14928 | 0.12199 | 0.0547* | |
| H1W | 0.0926 (17) | 0.2238 (8) | 0.677 (6) | 0.0517* |
| O1 | 0.0203 (10) | 0.0348 (11) | 0.0189 (11) | 0.0000 | 0.0017 (9) | 0.0000 |
| O6 | 0.0194 (7) | 0.0361 (8) | 0.0359 (9) | 0.0012 (6) | −0.0039 (7) | 0.0057 (7) |
| O13 | 0.0166 (7) | 0.0423 (9) | 0.0506 (11) | −0.0004 (6) | 0.0023 (7) | 0.0076 (8) |
| N4 | 0.0185 (8) | 0.0223 (8) | 0.0258 (10) | 0.0002 (6) | 0.0017 (7) | 0.0005 (7) |
| C2 | 0.0183 (13) | 0.0282 (14) | 0.0196 (15) | 0.0000 | 0.0013 (12) | 0.0000 |
| C3 | 0.0206 (10) | 0.0277 (10) | 0.0211 (10) | −0.0012 (8) | 0.0026 (9) | 0.0016 (9) |
| C5 | 0.0208 (9) | 0.0252 (10) | 0.0202 (10) | −0.0002 (8) | 0.0012 (9) | −0.0063 (9) |
| C7 | 0.0196 (9) | 0.0225 (9) | 0.0211 (11) | −0.0024 (7) | 0.0020 (9) | −0.0043 (8) |
| C8 | 0.0205 (10) | 0.0272 (10) | 0.0262 (11) | −0.0032 (7) | 0.0014 (9) | −0.0036 (9) |
| C9 | 0.0323 (11) | 0.0277 (11) | 0.0298 (12) | −0.0008 (9) | −0.0029 (10) | −0.0020 (9) |
| C10 | 0.0375 (12) | 0.0319 (12) | 0.0279 (13) | −0.0092 (9) | 0.0060 (10) | 0.0005 (10) |
| C11 | 0.0263 (11) | 0.0357 (12) | 0.0353 (13) | −0.0105 (9) | 0.0079 (10) | −0.0018 (10) |
| C12 | 0.0218 (10) | 0.0290 (11) | 0.0291 (12) | −0.0010 (8) | 0.0009 (10) | −0.0072 (9) |
| O1W | 0.0306 (11) | 0.0388 (12) | 0.0340 (14) | 0.0000 | −0.0103 (10) | 0.0000 |
| O1—C2 | 1.427 (3) | C7—C8 | 1.399 (2) |
| O6—C5 | 1.263 (2) | C7—C12 | 1.410 (2) |
| O13—C12 | 1.360 (2) | C8—C9 | 1.386 (3) |
| O1—H1 | 0.96 (3) | C9—C10 | 1.387 (3) |
| O13—H13 | 0.8400 | C10—C11 | 1.377 (3) |
| O1W—H1Wi | 0.92 (2) | C11—C12 | 1.392 (3) |
| O1W—H1W | 0.92 (2) | C2—H2 | 1.0000 |
| N4—C5 | 1.340 (2) | C3—H3B | 0.9900 |
| N4—C3 | 1.462 (2) | C3—H3A | 0.9900 |
| N4—H4 | 0.8800 | C8—H8 | 0.9500 |
| C2—C3 | 1.534 (2) | C9—H9 | 0.9500 |
| C2—C3i | 1.534 (2) | C10—H10 | 0.9500 |
| C5—C7 | 1.485 (2) | C11—H11 | 0.9500 |
| C2—O1—H1 | 106.4 (18) | C7—C12—C11 | 120.32 (18) |
| C12—O13—H13 | 109.00 | O13—C12—C7 | 121.68 (18) |
| H1W—O1W—H1Wi | 107 (2) | O13—C12—C11 | 118.00 (17) |
| C3—N4—C5 | 121.76 (14) | O1—C2—H2 | 107.00 |
| C3—N4—H4 | 119.00 | C3i—C2—H2 | 107.00 |
| C5—N4—H4 | 119.00 | C3—C2—H2 | 107.00 |
| O1—C2—C3i | 111.17 (13) | N4—C3—H3B | 110.00 |
| O1—C2—C3 | 111.17 (13) | C2—C3—H3A | 110.00 |
| C3—C2—C3i | 112.93 (19) | N4—C3—H3A | 110.00 |
| N4—C3—C2 | 109.75 (15) | H3A—C3—H3B | 108.00 |
| O6—C5—N4 | 120.19 (16) | C2—C3—H3B | 110.00 |
| N4—C5—C7 | 119.79 (15) | C7—C8—H8 | 119.00 |
| O6—C5—C7 | 120.01 (16) | C9—C8—H8 | 119.00 |
| C5—C7—C12 | 118.60 (16) | C10—C9—H9 | 120.00 |
| C8—C7—C12 | 118.00 (16) | C8—C9—H9 | 120.00 |
| C5—C7—C8 | 123.40 (15) | C9—C10—H10 | 120.00 |
| C7—C8—C9 | 121.48 (17) | C11—C10—H10 | 120.00 |
| C8—C9—C10 | 119.29 (19) | C10—C11—H11 | 120.00 |
| C9—C10—C11 | 120.75 (19) | C12—C11—H11 | 120.00 |
| C10—C11—C12 | 120.15 (19) | ||
| C3—N4—C5—O6 | 5.8 (3) | C12—C7—C8—C9 | 0.3 (3) |
| C3—N4—C5—C7 | −173.61 (15) | C5—C7—C12—O13 | 0.2 (3) |
| C5—N4—C3—C2 | 83.3 (2) | C5—C7—C12—C11 | −179.68 (18) |
| O1—C2—C3—N4 | 67.2 (2) | C8—C7—C12—O13 | 179.97 (19) |
| C3i—C2—C3—N4 | −167.07 (16) | C8—C7—C12—C11 | 0.1 (3) |
| O6—C5—C7—C8 | 177.11 (17) | C7—C8—C9—C10 | −0.4 (3) |
| O6—C5—C7—C12 | −3.1 (3) | C8—C9—C10—C11 | 0.2 (3) |
| N4—C5—C7—C8 | −3.5 (3) | C9—C10—C11—C12 | 0.2 (3) |
| N4—C5—C7—C12 | 176.29 (17) | C10—C11—C12—O13 | 179.8 (2) |
| C5—C7—C8—C9 | −179.93 (17) | C10—C11—C12—C7 | −0.4 (3) |
| H··· | ||||
| O1—H1···O1 | 0.96 (3) | 1.82 (3) | 2.778 (3) | 179 (3) |
| O1 | 0.92 (2) | 1.92 (2) | 2.827 (2) | 174 (2) |
| O13—H13···O6 | 0.84 | 1.75 | 2.500 (2) | 147 |
| N4—H4···O13iv | 0.88 | 2.07 | 2.915 (2) | 160 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O1—H1⋯O1 | 0.96 (3) | 1.82 (3) | 2.778 (3) | 179 (3) |
| O1 | 0.92 (2) | 1.92 (2) | 2.827 (2) | 174 (2) |
| O13—H13⋯O6 | 0.84 | 1.75 | 2.500 (2) | 147 |
| N4—H4⋯O13iii | 0.88 | 2.07 | 2.915 (2) | 160 |
Symmetry codes: (i) ; (ii) ; (iii) .