Literature DB >> 24098256

3-(4-Hy-droxy-phen-yl)-1,5-bis-(pyridin-2-yl)pentane-1,5-dione.

Lixia Pan1, Huaduan Shi, Zhen Ma.   

Abstract

In the title mol-ecule, C21H18N2O3, the n class="Chemical">pyridine rings make a dihedral angle of 13.1 (1)°. The phenyl ring is approximately perpendicular to both of them, forming dihedral angles of 87.4 (1)and 81.9 (1)°. In the crystal, pairs of O-H⋯N hydrogen bonds link the mol-ecules into centrosymmetric dimers. Additional C-H⋯O, π-π [centroid-centroid distance = 3.971 (2) Å] and C-H⋯π inter-actions consolidate the dimers into a three-dimensional network.

Entities:  

Year:  2013        PMID: 24098256      PMCID: PMC3790437          DOI: 10.1107/S1600536813025518

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis of the title compound, see: Constable et al. (1990 ▶, 1998 ▶); He et al. (2006 ▶). For the syntheses of terpyridine compounds and their properties and applications, see: Ma et al. (2009 ▶, 2010 ▶, 2012 ▶, 2013 ▶). For standard bond lengths, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C21H18N2O3 M = 346.37 Triclinic, a = 8.4392 (6) Å b = 10.6683 (7) Å c = 11.0755 (8) Å α = 100.623 (6)° β = 103.867 (6)° γ = 110.550 (6)° V = 866.05 (10) Å3 Z = 2 Mo Kα radiation μ = 0.09 mm−1 T = 298 K 0.39 × 0.38 × 0.22 mm

Data collection

Agilent SuperNova (Dual, Cu at zero, Atlas) diffractometer Absorption correction: multi-scan (CrysAlis PRO, Agilent, 2012 ▶) T min = 0.813, T max = 1.000 6339 measured reflections 3544 independent reflections 2661 reflections with I > 2σ(I) R int = 0.017

Refinement

R[F 2 > 2σ(F 2)] = 0.043 wR(F 2) = 0.119 S = 1.03 3544 reflections 308 parameters All H-atom parameters refined Δρmax = 0.18 e Å−3 Δρmin = −0.14 e Å−3 Data collection: CrysAlis PRO (Agilent, 2012 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: Mercury (Macrae et al., 2008 ▶); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) I, C21H18N2O3. DOI: 10.1107/S1600536813025518/ld2113sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813025518/ld2113Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813025518/ld2113Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C21H18N2O3Z = 2
Mr = 346.37F(000) = 364
Triclinic, P1Dx = 1.328 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 8.4392 (6) ÅCell parameters from 6339 reflections
b = 10.6683 (7) Åθ = 3.2–26.4°
c = 11.0755 (8) ŵ = 0.09 mm1
α = 100.623 (6)°T = 298 K
β = 103.867 (6)°Prism, colourless
γ = 110.550 (6)°0.39 × 0.38 × 0.22 mm
V = 866.05 (10) Å3
Agilent SuperNova (Dual, Cu at zero, Atlas) diffractometer3544 independent reflections
Radiation source: SuperNova (Mo) X-ray Source2661 reflections with I > 2σ(I)
Mirror monochromatorRint = 0.017
Detector resolution: 0 pixels mm-1θmax = 26.4°, θmin = 3.2°
ω scansh = −10→9
Absorption correction: multi-scan (CrysAlis PRO, Agilent, 2012)k = −13→13
Tmin = 0.813, Tmax = 1.000l = −13→11
6339 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.043All H-atom parameters refined
wR(F2) = 0.119w = 1/[σ2(Fo2) + (0.0498P)2 + 0.1436P] where P = (Fo2 + 2Fc2)/3
S = 1.03(Δ/σ)max < 0.001
3544 reflectionsΔρmax = 0.18 e Å3
308 parametersΔρmin = −0.14 e Å3
0 restraintsExtinction correction: SHELXL, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.018 (3)
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.71359 (19)0.30614 (12)0.46604 (11)0.0618 (4)
O20.91770 (19)0.78344 (12)0.42074 (12)0.0667 (4)
O30.08708 (17)0.40522 (14)0.08964 (13)0.0592 (3)
H03A0.044 (3)0.351 (3)0.003 (2)0.100 (8)*
N10.6613 (2)0.06026 (14)0.18572 (13)0.0603 (4)
N21.06938 (19)0.81798 (14)0.15318 (13)0.0493 (4)
C10.6711 (2)0.10690 (15)0.30835 (14)0.0409 (4)
C20.6203 (3)0.01932 (17)0.38203 (17)0.0545 (5)
H2A0.632 (2)0.0607 (19)0.4701 (18)0.060 (5)*
C30.5570 (3)−0.12308 (18)0.32835 (19)0.0639 (5)
H3A0.524 (3)−0.184 (2)0.3782 (19)0.078 (6)*
C40.5449 (3)−0.17259 (19)0.20295 (19)0.0680 (6)
H4A0.501 (3)−0.273 (2)0.159 (2)0.083 (6)*
C50.5963 (4)−0.07886 (19)0.1355 (2)0.0791 (7)
H5A0.586 (3)−0.110 (2)0.044 (2)0.092 (7)*
C60.7379 (2)0.26254 (15)0.36597 (14)0.0414 (4)
C70.8359 (2)0.35918 (16)0.29975 (17)0.0432 (4)
H7A0.966 (3)0.3793 (18)0.3406 (17)0.060 (5)*
H7B0.798 (2)0.3108 (17)0.2046 (16)0.049 (4)*
C80.8128 (2)0.49738 (14)0.32322 (14)0.0378 (3)
H8A0.847 (2)0.5387 (15)0.4188 (15)0.040 (4)*
C90.9371 (2)0.60196 (15)0.27268 (16)0.0409 (4)
H9B1.059 (2)0.6076 (17)0.2993 (15)0.052 (5)*
H9A0.897 (2)0.5730 (17)0.1737 (17)0.052 (5)*
C100.9588 (2)0.74944 (15)0.32631 (15)0.0426 (4)
C111.0436 (2)0.85928 (15)0.26587 (15)0.0428 (4)
C121.0940 (3)0.99903 (18)0.3296 (2)0.0623 (5)
H12A1.072 (3)1.023 (2)0.410 (2)0.075 (6)*
C131.1764 (3)1.0996 (2)0.2766 (2)0.0798 (7)
H13A1.215 (3)1.200 (3)0.322 (2)0.108 (8)*
C141.2058 (3)1.0592 (2)0.1633 (2)0.0808 (7)
H14A1.263 (3)1.123 (3)0.122 (2)0.100 (8)*
C151.1504 (3)0.9187 (2)0.1043 (2)0.0665 (5)
H15A1.167 (3)0.886 (2)0.0226 (19)0.068 (6)*
C160.6193 (2)0.47157 (13)0.26132 (13)0.0352 (3)
C170.5210 (2)0.51095 (15)0.33320 (15)0.0404 (4)
H17A0.582 (2)0.5549 (16)0.4262 (16)0.047 (4)*
C180.3451 (2)0.48794 (16)0.27609 (15)0.0439 (4)
H18A0.281 (2)0.5150 (18)0.3262 (16)0.055 (5)*
C190.2610 (2)0.42459 (15)0.14348 (15)0.0412 (4)
C200.3557 (2)0.38460 (16)0.06964 (15)0.0431 (4)
H20A0.297 (2)0.3412 (18)−0.0231 (17)0.056 (5)*
C210.5317 (2)0.40803 (15)0.12846 (14)0.0412 (4)
H21A0.598 (2)0.3788 (17)0.0732 (16)0.052 (4)*
U11U22U33U12U13U23
O10.0992 (11)0.0463 (6)0.0503 (7)0.0314 (7)0.0388 (7)0.0165 (5)
O20.0913 (11)0.0402 (6)0.0726 (8)0.0205 (6)0.0498 (8)0.0096 (6)
O30.0476 (8)0.0696 (8)0.0573 (8)0.0270 (6)0.0158 (6)0.0081 (6)
N10.0922 (13)0.0422 (8)0.0493 (8)0.0227 (8)0.0355 (8)0.0142 (6)
N20.0491 (9)0.0450 (7)0.0508 (8)0.0142 (6)0.0180 (6)0.0160 (6)
C10.0478 (10)0.0381 (8)0.0402 (8)0.0191 (7)0.0162 (7)0.0144 (6)
C20.0769 (13)0.0433 (9)0.0463 (9)0.0213 (9)0.0281 (9)0.0168 (8)
C30.0923 (16)0.0427 (9)0.0621 (11)0.0231 (10)0.0357 (11)0.0241 (9)
C40.0978 (17)0.0371 (9)0.0669 (12)0.0208 (10)0.0369 (11)0.0125 (9)
C50.132 (2)0.0432 (10)0.0587 (12)0.0238 (11)0.0485 (13)0.0097 (9)
C60.0495 (10)0.0409 (8)0.0380 (8)0.0218 (7)0.0156 (7)0.0135 (7)
C70.0499 (11)0.0369 (8)0.0492 (9)0.0206 (7)0.0211 (8)0.0152 (7)
C80.0438 (9)0.0325 (7)0.0377 (8)0.0152 (6)0.0161 (7)0.0093 (6)
C90.0419 (10)0.0329 (7)0.0491 (9)0.0140 (7)0.0199 (7)0.0108 (7)
C100.0423 (9)0.0346 (7)0.0472 (8)0.0126 (7)0.0172 (7)0.0075 (7)
C110.0404 (9)0.0348 (7)0.0496 (9)0.0133 (7)0.0132 (7)0.0110 (7)
C120.0771 (14)0.0387 (9)0.0689 (12)0.0200 (9)0.0284 (11)0.0131 (9)
C130.1020 (18)0.0371 (10)0.0973 (16)0.0189 (11)0.0391 (14)0.0247 (11)
C140.0974 (18)0.0550 (12)0.0934 (16)0.0188 (11)0.0427 (14)0.0405 (12)
C150.0765 (15)0.0599 (11)0.0652 (12)0.0200 (10)0.0317 (11)0.0285 (10)
C160.0438 (9)0.0261 (6)0.0379 (7)0.0128 (6)0.0182 (6)0.0112 (6)
C170.0494 (10)0.0371 (7)0.0351 (8)0.0163 (7)0.0183 (7)0.0092 (6)
C180.0475 (10)0.0432 (8)0.0465 (9)0.0205 (7)0.0246 (8)0.0102 (7)
C190.0417 (9)0.0358 (7)0.0475 (8)0.0154 (7)0.0174 (7)0.0133 (7)
C200.0466 (10)0.0410 (8)0.0366 (8)0.0135 (7)0.0153 (7)0.0071 (7)
C210.0464 (10)0.0385 (8)0.0405 (8)0.0164 (7)0.0222 (7)0.0078 (6)
O1—C61.2135 (17)C8—H8A0.996 (15)
O2—C101.2114 (18)C9—C101.504 (2)
O3—C191.3689 (19)C9—H9B0.975 (18)
O3—H03A0.93 (2)C9—H9A1.017 (17)
N1—C11.3295 (19)C10—C111.504 (2)
N1—C51.338 (2)C11—C121.387 (2)
N2—C151.339 (2)C12—C131.372 (3)
N2—C111.340 (2)C12—H12A0.96 (2)
C1—C21.375 (2)C13—C141.360 (3)
C1—C61.504 (2)C13—H13A0.99 (3)
C2—C31.375 (2)C14—C151.376 (3)
C2—H2A0.960 (18)C14—H14A0.95 (3)
C3—C41.357 (3)C15—H15A0.966 (19)
C3—H3A0.94 (2)C16—C211.389 (2)
C4—C51.368 (3)C16—C171.391 (2)
C4—H4A0.99 (2)C17—C181.378 (2)
C5—H5A0.99 (2)C17—H17A0.971 (16)
C6—C71.502 (2)C18—C191.384 (2)
C7—C81.538 (2)C18—H18A0.938 (18)
C7—H7A1.006 (19)C19—C201.384 (2)
C7—H7B1.001 (16)C20—C211.381 (2)
C8—C161.513 (2)C20—H20A0.967 (17)
C8—C91.532 (2)C21—H21A0.998 (17)
C19—O3—H03A109.1 (15)H9B—C9—H9A104.6 (13)
C1—N1—C5116.28 (15)O2—C10—C9121.67 (14)
C15—N2—C11116.90 (15)O2—C10—C11119.15 (13)
N1—C1—C2122.88 (14)C9—C10—C11119.08 (13)
N1—C1—C6117.47 (13)N2—C11—C12122.63 (15)
C2—C1—C6119.64 (14)N2—C11—C10118.46 (13)
C1—C2—C3119.43 (16)C12—C11—C10118.91 (15)
C1—C2—H2A118.1 (11)C13—C12—C11119.0 (2)
C3—C2—H2A122.4 (11)C13—C12—H12A121.8 (12)
C4—C3—C2118.47 (17)C11—C12—H12A119.2 (12)
C4—C3—H3A121.3 (12)C14—C13—C12118.97 (19)
C2—C3—H3A120.2 (12)C14—C13—H13A121.0 (15)
C3—C4—C5118.65 (17)C12—C13—H13A120.0 (15)
C3—C4—H4A122.3 (12)C13—C14—C15119.1 (2)
C5—C4—H4A119.1 (12)C13—C14—H14A123.3 (14)
N1—C5—C4124.27 (18)C15—C14—H14A117.6 (15)
N1—C5—H5A114.4 (13)N2—C15—C14123.4 (2)
C4—C5—H5A121.3 (13)N2—C15—H15A115.5 (12)
O1—C6—C7122.05 (14)C14—C15—H15A121.1 (12)
O1—C6—C1118.79 (14)C21—C16—C17116.72 (14)
C7—C6—C1119.14 (13)C21—C16—C8121.07 (13)
C6—C7—C8112.24 (13)C17—C16—C8122.21 (13)
C6—C7—H7A104.7 (10)C18—C17—C16121.93 (14)
C8—C7—H7A109.3 (10)C18—C17—H17A121.3 (9)
C6—C7—H7B110.5 (9)C16—C17—H17A116.7 (10)
C8—C7—H7B111.5 (9)C17—C18—C19120.22 (15)
H7A—C7—H7B108.3 (14)C17—C18—H18A120.7 (10)
C16—C8—C9110.96 (12)C19—C18—H18A119.0 (11)
C16—C8—C7110.90 (12)O3—C19—C20122.26 (14)
C9—C8—C7110.75 (12)O3—C19—C18118.70 (14)
C16—C8—H8A107.9 (9)C20—C19—C18119.04 (15)
C9—C8—H8A108.1 (9)C21—C20—C19119.99 (14)
C7—C8—H8A108.1 (8)C21—C20—H20A121.1 (10)
C10—C9—C8112.42 (13)C19—C20—H20A118.9 (10)
C10—C9—H9B104.4 (10)C20—C21—C16122.10 (14)
C8—C9—H9B112.2 (10)C20—C21—H21A118.6 (9)
C10—C9—H9A110.8 (9)C16—C21—H21A119.3 (10)
C8—C9—H9A111.9 (10)
C5—N1—C1—C20.8 (3)C9—C10—C11—N211.1 (2)
C5—N1—C1—C6−178.05 (18)O2—C10—C11—C128.4 (3)
N1—C1—C2—C30.3 (3)C9—C10—C11—C12−168.07 (16)
C6—C1—C2—C3179.14 (17)N2—C11—C12—C13−1.1 (3)
C1—C2—C3—C4−0.7 (3)C10—C11—C12—C13178.02 (18)
C2—C3—C4—C50.1 (3)C11—C12—C13—C140.1 (4)
C1—N1—C5—C4−1.6 (4)C12—C13—C14—C150.7 (4)
C3—C4—C5—N11.1 (4)C11—N2—C15—C14−0.4 (3)
N1—C1—C6—O1164.80 (16)C13—C14—C15—N2−0.6 (4)
C2—C1—C6—O1−14.1 (2)C9—C8—C16—C2164.71 (16)
N1—C1—C6—C7−16.5 (2)C7—C8—C16—C21−58.83 (17)
C2—C1—C6—C7164.56 (16)C9—C8—C16—C17−114.63 (14)
O1—C6—C7—C8−30.0 (2)C7—C8—C16—C17121.83 (14)
C1—C6—C7—C8151.38 (14)C21—C16—C17—C180.2 (2)
C6—C7—C8—C16−65.15 (17)C8—C16—C17—C18179.58 (13)
C6—C7—C8—C9171.20 (13)C16—C17—C18—C19−0.3 (2)
C16—C8—C9—C1072.76 (16)C17—C18—C19—O3−179.03 (13)
C7—C8—C9—C10−163.62 (14)C17—C18—C19—C200.2 (2)
C8—C9—C10—O216.4 (2)O3—C19—C20—C21179.21 (13)
C8—C9—C10—C11−167.22 (13)C18—C19—C20—C210.0 (2)
C15—N2—C11—C121.2 (3)C19—C20—C21—C16−0.1 (2)
C15—N2—C11—C10−177.89 (16)C17—C16—C21—C200.0 (2)
O2—C10—C11—N2−172.47 (15)C8—C16—C21—C20−179.38 (13)
D—H···AD—HH···AD···AD—H···A
O3—H03A···N2i0.93 (2)2.00 (2)2.8940 (19)160 (2)
C12—H12A···O2ii0.96 (2)2.48 (2)3.312 (3)145 (2)
C4a—H4a···Cg3iii0.99 (2)0.98 (2)3.825 (2)144 (2)
Table 1

Hydrogen-bond geometry (Å, °)

Cg3 is the centroid of the C16–C21 ring.

D—H⋯A D—HH⋯A DA D—H⋯A
O3—H03A⋯N2i 0.93 (2)2.00 (2)2.8940 (19)160 (2)
C12—H12A⋯O2ii 0.96 (2)2.48 (2)3.312 (3)145 (2)
C4a—H4a⋯Cg3iii 0.99 (2)0.98 (2)3.825 (2)144 (2)

Symmetry codes: (i) ; (ii) ; (iii) .

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