| Literature DB >> 24098241 |
Zeenat Fatima1, Gottimukkala Rambabu, Bandapalli Palakshi Reddy, Vijayaparthasarathi Vijayakumar, Devadasan Velmurugan.
Abstract
In the title compound, C13H19NO2, the dioxane ring adopts a chair conformation and its mean plane makes a dihedral angle of 45.36 (8)° with the phenyl ring. In the crystal, mol-ecules are linked by pairs of N-H⋯O hydrogen bonds, forming inversion dimers with R (2) 2(12) ring motifs. These dimers are consolidated by pairs of C-H⋯O hydrogen bonds with R (2) 2(8) ring motifs.Entities:
Year: 2013 PMID: 24098241 PMCID: PMC3790422 DOI: 10.1107/S1600536813025294
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C13H19NO2 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 3177 reflections |
| θ = 2.0–28.4° | |
| µ = 0.08 mm−1 | |
| β = 99.066 (2)° | Block, colourless |
| 0.30 × 0.25 × 0.20 mm | |
| Bruker SMART APEXII area-detector diffractometer | 3177 independent reflections |
| Radiation source: fine-focus sealed tube | 2481 reflections with |
| Graphite monochromator | |
| ω and φ scans | θmax = 28.4°, θmin = 2.0° |
| Absorption correction: multi-scan ( | |
| 12359 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max < 0.001 | |
| 3177 reflections | Δρmax = 0.18 e Å−3 |
| 152 parameters | Δρmin = −0.12 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.077 (4) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| H1 | 0.3087 (18) | 0.4830 (19) | 0.5783 (7) | 0.067 (4)* | |
| C1 | 0.31391 (18) | 0.68745 (18) | 0.35171 (7) | 0.0682 (4) | |
| H1A | 0.3217 | 0.6610 | 0.3064 | 0.102* | |
| H1B | 0.4212 | 0.7278 | 0.3737 | 0.102* | |
| H1C | 0.2300 | 0.7738 | 0.3531 | 0.102* | |
| C2 | 0.26506 (14) | 0.53043 (15) | 0.38614 (6) | 0.0509 (3) | |
| H2 | 0.1570 | 0.4884 | 0.3627 | 0.061* | |
| C3 | 0.24940 (13) | 0.56014 (14) | 0.45810 (5) | 0.0474 (3) | |
| H3A | 0.3511 | 0.6147 | 0.4804 | 0.057* | |
| H3B | 0.1550 | 0.6354 | 0.4607 | 0.057* | |
| C4 | 0.22287 (12) | 0.39494 (14) | 0.49256 (5) | 0.0457 (3) | |
| H4 | 0.1121 | 0.3489 | 0.4739 | 0.055* | |
| C5 | 0.35637 (15) | 0.25112 (14) | 0.41290 (6) | 0.0511 (3) | |
| H5 | 0.2477 | 0.2066 | 0.3910 | 0.061* | |
| C6 | 0.4939 (2) | 0.12583 (18) | 0.40646 (8) | 0.0727 (4) | |
| H6A | 0.4992 | 0.1072 | 0.3604 | 0.109* | |
| H6B | 0.4703 | 0.0204 | 0.4267 | 0.109* | |
| H6C | 0.6000 | 0.1697 | 0.4281 | 0.109* | |
| C7 | 0.19069 (13) | 0.28783 (15) | 0.60341 (5) | 0.0475 (3) | |
| C8 | 0.13383 (15) | 0.12993 (17) | 0.57909 (7) | 0.0570 (3) | |
| H8 | 0.1240 | 0.1079 | 0.5339 | 0.068* | |
| C9 | 0.09169 (17) | 0.00538 (19) | 0.62110 (8) | 0.0684 (4) | |
| H9 | 0.0524 | −0.0991 | 0.6040 | 0.082* | |
| C10 | 0.10746 (19) | 0.0348 (2) | 0.68794 (8) | 0.0773 (4) | |
| H10 | 0.0799 | −0.0494 | 0.7163 | 0.093* | |
| C11 | 0.16463 (19) | 0.1905 (2) | 0.71237 (7) | 0.0739 (4) | |
| H11 | 0.1760 | 0.2096 | 0.7578 | 0.089* | |
| C12 | 0.20590 (14) | 0.31981 (18) | 0.67183 (6) | 0.0573 (3) | |
| C13 | 0.2628 (2) | 0.4902 (2) | 0.69976 (7) | 0.0778 (4) | |
| H13A | 0.2537 | 0.4935 | 0.7460 | 0.117* | |
| H13B | 0.1929 | 0.5772 | 0.6768 | 0.117* | |
| H13C | 0.3781 | 0.5088 | 0.6943 | 0.117* | |
| N1 | 0.22865 (13) | 0.41904 (13) | 0.56182 (5) | 0.0508 (2) | |
| O1 | 0.35151 (9) | 0.27540 (10) | 0.48107 (4) | 0.0477 (2) | |
| O2 | 0.39299 (10) | 0.40450 (10) | 0.38245 (4) | 0.0509 (2) |
| C1 | 0.0724 (8) | 0.0649 (8) | 0.0671 (8) | 0.0025 (7) | 0.0106 (6) | 0.0160 (6) |
| C2 | 0.0435 (5) | 0.0577 (7) | 0.0495 (6) | −0.0018 (5) | 0.0009 (4) | 0.0032 (5) |
| C3 | 0.0407 (5) | 0.0495 (6) | 0.0513 (6) | 0.0054 (4) | 0.0047 (4) | −0.0003 (5) |
| C4 | 0.0375 (5) | 0.0529 (6) | 0.0461 (6) | −0.0011 (4) | 0.0045 (4) | −0.0026 (4) |
| C5 | 0.0567 (6) | 0.0469 (6) | 0.0500 (6) | −0.0108 (5) | 0.0095 (5) | −0.0089 (5) |
| C6 | 0.0930 (10) | 0.0516 (7) | 0.0778 (9) | 0.0049 (7) | 0.0270 (8) | −0.0136 (6) |
| C7 | 0.0377 (5) | 0.0567 (7) | 0.0486 (6) | 0.0031 (4) | 0.0085 (4) | 0.0021 (5) |
| C8 | 0.0502 (6) | 0.0623 (7) | 0.0587 (7) | −0.0030 (5) | 0.0096 (5) | 0.0005 (6) |
| C9 | 0.0576 (7) | 0.0630 (8) | 0.0861 (10) | −0.0058 (6) | 0.0158 (6) | 0.0088 (7) |
| C10 | 0.0706 (9) | 0.0835 (11) | 0.0808 (10) | −0.0003 (8) | 0.0211 (7) | 0.0279 (8) |
| C11 | 0.0714 (8) | 0.0987 (12) | 0.0537 (7) | 0.0022 (8) | 0.0161 (6) | 0.0137 (7) |
| C12 | 0.0497 (6) | 0.0738 (8) | 0.0497 (6) | 0.0029 (6) | 0.0122 (5) | −0.0002 (6) |
| C13 | 0.0895 (10) | 0.0930 (11) | 0.0544 (8) | −0.0102 (9) | 0.0217 (7) | −0.0172 (7) |
| N1 | 0.0514 (5) | 0.0556 (6) | 0.0455 (5) | −0.0050 (4) | 0.0079 (4) | −0.0035 (4) |
| O1 | 0.0496 (4) | 0.0458 (4) | 0.0475 (4) | 0.0004 (3) | 0.0073 (3) | −0.0025 (3) |
| O2 | 0.0523 (4) | 0.0504 (5) | 0.0517 (4) | −0.0042 (3) | 0.0136 (3) | −0.0022 (3) |
| C1—C2 | 1.5048 (17) | C6—H6B | 0.9600 |
| C1—H1A | 0.9600 | C6—H6C | 0.9600 |
| C1—H1B | 0.9600 | C7—C8 | 1.3893 (17) |
| C1—H1C | 0.9600 | C7—N1 | 1.4014 (15) |
| C2—O2 | 1.4376 (14) | C7—C12 | 1.4065 (16) |
| C2—C3 | 1.5133 (16) | C8—C9 | 1.3800 (18) |
| C2—H2 | 0.9800 | C8—H8 | 0.9300 |
| C3—C4 | 1.5103 (16) | C9—C10 | 1.371 (2) |
| C3—H3A | 0.9700 | C9—H9 | 0.9300 |
| C3—H3B | 0.9700 | C10—C11 | 1.375 (2) |
| C4—N1 | 1.4212 (14) | C10—H10 | 0.9300 |
| C4—O1 | 1.4431 (13) | C11—C12 | 1.386 (2) |
| C4—H4 | 0.9800 | C11—H11 | 0.9300 |
| C5—O2 | 1.4108 (14) | C12—C13 | 1.501 (2) |
| C5—O1 | 1.4122 (13) | C13—H13A | 0.9600 |
| C5—C6 | 1.5010 (18) | C13—H13B | 0.9600 |
| C5—H5 | 0.9800 | C13—H13C | 0.9600 |
| C6—H6A | 0.9600 | N1—H1 | 0.843 (15) |
| C2—C1—H1A | 109.5 | C5—C6—H6C | 109.5 |
| C2—C1—H1B | 109.5 | H6A—C6—H6C | 109.5 |
| H1A—C1—H1B | 109.5 | H6B—C6—H6C | 109.5 |
| C2—C1—H1C | 109.5 | C8—C7—N1 | 122.26 (10) |
| H1A—C1—H1C | 109.5 | C8—C7—C12 | 119.20 (11) |
| H1B—C1—H1C | 109.5 | N1—C7—C12 | 118.51 (11) |
| O2—C2—C1 | 107.58 (9) | C9—C8—C7 | 120.85 (12) |
| O2—C2—C3 | 109.08 (8) | C9—C8—H8 | 119.6 |
| C1—C2—C3 | 113.24 (10) | C7—C8—H8 | 119.6 |
| O2—C2—H2 | 109.0 | C10—C9—C8 | 120.41 (14) |
| C1—C2—H2 | 109.0 | C10—C9—H9 | 119.8 |
| C3—C2—H2 | 109.0 | C8—C9—H9 | 119.8 |
| C4—C3—C2 | 111.04 (9) | C9—C10—C11 | 119.03 (14) |
| C4—C3—H3A | 109.4 | C9—C10—H10 | 120.5 |
| C2—C3—H3A | 109.4 | C11—C10—H10 | 120.5 |
| C4—C3—H3B | 109.4 | C10—C11—C12 | 122.41 (14) |
| C2—C3—H3B | 109.4 | C10—C11—H11 | 118.8 |
| H3A—C3—H3B | 108.0 | C12—C11—H11 | 118.8 |
| N1—C4—O1 | 109.70 (8) | C11—C12—C7 | 118.09 (13) |
| N1—C4—C3 | 111.35 (9) | C11—C12—C13 | 121.14 (12) |
| O1—C4—C3 | 109.23 (8) | C7—C12—C13 | 120.76 (12) |
| N1—C4—H4 | 108.8 | C12—C13—H13A | 109.5 |
| O1—C4—H4 | 108.8 | C12—C13—H13B | 109.5 |
| C3—C4—H4 | 108.8 | H13A—C13—H13B | 109.5 |
| O2—C5—O1 | 111.04 (9) | C12—C13—H13C | 109.5 |
| O2—C5—C6 | 108.50 (10) | H13A—C13—H13C | 109.5 |
| O1—C5—C6 | 108.08 (10) | H13B—C13—H13C | 109.5 |
| O2—C5—H5 | 109.7 | C7—N1—C4 | 121.93 (10) |
| O1—C5—H5 | 109.7 | C7—N1—H1 | 115.0 (10) |
| C6—C5—H5 | 109.7 | C4—N1—H1 | 112.4 (10) |
| C5—C6—H6A | 109.5 | C5—O1—C4 | 112.35 (8) |
| C5—C6—H6B | 109.5 | C5—O2—C2 | 111.57 (8) |
| H6A—C6—H6B | 109.5 | ||
| O2—C2—C3—C4 | −52.82 (11) | N1—C7—C12—C13 | −0.45 (17) |
| C1—C2—C3—C4 | −172.57 (9) | C8—C7—N1—C4 | −4.57 (16) |
| C2—C3—C4—N1 | 172.86 (8) | C12—C7—N1—C4 | 177.47 (10) |
| C2—C3—C4—O1 | 51.55 (11) | O1—C4—N1—C7 | −65.48 (12) |
| N1—C7—C8—C9 | −177.63 (11) | C3—C4—N1—C7 | 173.48 (9) |
| C12—C7—C8—C9 | 0.31 (17) | O2—C5—O1—C4 | 60.92 (11) |
| C7—C8—C9—C10 | −0.9 (2) | C6—C5—O1—C4 | 179.82 (9) |
| C8—C9—C10—C11 | 0.5 (2) | N1—C4—O1—C5 | −177.70 (9) |
| C9—C10—C11—C12 | 0.5 (2) | C3—C4—O1—C5 | −55.39 (11) |
| C10—C11—C12—C7 | −1.0 (2) | O1—C5—O2—C2 | −61.96 (11) |
| C10—C11—C12—C13 | 178.05 (14) | C6—C5—O2—C2 | 179.40 (9) |
| C8—C7—C12—C11 | 0.63 (17) | C1—C2—O2—C5 | −179.23 (9) |
| N1—C7—C12—C11 | 178.65 (11) | C3—C2—O2—C5 | 57.58 (11) |
| C8—C7—C12—C13 | −178.47 (12) |
| H··· | ||||
| N1—H1···O2i | 0.843 (15) | 2.559 (15) | 3.3688 (13) | 161.3 (13) |
| C3—H3 | 0.97 | 2.54 | 3.4950 (13) | 167 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N1—H1⋯O2i | 0.843 (15) | 2.559 (15) | 3.3688 (13) | 161.3 (13) |
| C3—H3 | 0.97 | 2.54 | 3.4950 (13) | 167 |
Symmetry code: (i) .