Literature DB >> 24096414

Oxidation of the cyclic ethers 1,4-dioxane and tetrahydrofuran by a monooxygenase in two Pseudonocardia species.

Christopher M Sales1, Ariel Grostern, Juanito V Parales, Rebecca E Parales, Lisa Alvarez-Cohen.   

Abstract

The bacterium Pseudonocardia dioxanivorans CB1190 grows on the cyclic ethers 1,4-dioxane (dioxane) and tetrahydrofuran (THF) as sole carbon and energy sources. Prior transcriptional studies indicated that an annotated THF monooxygenase (THF MO) gene cluster, thmADBC, located on a plasmid in CB1190 is upregulated during growth on dioxane. In this work, transcriptional analysis demonstrates that upregulation of thmADBC occurs during growth on the dioxane metabolite β-hydroxyethoxyacetic acid (HEAA) and on THF. Comparison of the transcriptomes of CB1190 grown on THF and succinate (an intermediate of THF degradation) permitted the identification of other genes involved in THF metabolism. Dioxane and THF oxidation activity of the THF MO was verified in Rhodococcus jostii RHA1 cells heterologously expressing the CB1190 thmADBC gene cluster. Interestingly, these thmADBC expression clones accumulated HEAA as a dead-end product of dioxane transformation, indicating that despite its genes being transcriptionally upregulated during growth on HEAA, the THF MO enzyme is not responsible for degradation of HEAA in CB1190. Similar activities were also observed in RHA1 cells heterologously expressing the thmADBC gene cluster from Pseudonocardia tetrahydrofuranoxydans K1.

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Year:  2013        PMID: 24096414      PMCID: PMC3837796          DOI: 10.1128/AEM.02418-13

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  39 in total

1.  Mineralization of 1,4-dioxane in the presence of a structural analog.

Authors:  M J Zenker; R C Borden; M A Barlaz
Journal:  Biodegradation       Date:  2000       Impact factor: 3.909

2.  Temporal transcriptomic microarray analysis of "Dehalococcoides ethenogenes" strain 195 during the transition into stationary phase.

Authors:  David R Johnson; Eoin L Brodie; Alan E Hubbard; Gary L Andersen; Stephen H Zinder; Lisa Alvarez-Cohen
Journal:  Appl Environ Microbiol       Date:  2008-02-29       Impact factor: 4.792

3.  An improved assay for bacterial methane mono-oxygenase: some properties of the enzyme from Methylomonas methanica.

Authors:  J Colby; H Dalton; R Whittenbury
Journal:  Biochem J       Date:  1975-11       Impact factor: 3.857

4.  Pseudonocardia dioxanivorans sp. nov., a novel actinomycete that grows on 1,4-dioxane.

Authors:  Shaily Mahendra; Lisa Alvarez-Cohen
Journal:  Int J Syst Evol Microbiol       Date:  2005-03       Impact factor: 2.747

5.  Biodegradation of ether pollutants by Pseudonocardia sp. strain ENV478.

Authors:  Simon Vainberg; Kevin McClay; Hisako Masuda; Duane Root; Charles Condee; Gerben J Zylstra; Robert J Steffan
Journal:  Appl Environ Microbiol       Date:  2006-08       Impact factor: 4.792

6.  Kinetics of 1,4-dioxane biodegradation by monooxygenase-expressing bacteria.

Authors:  Shaily Mahendra; Lisa Alvarez-Cohen
Journal:  Environ Sci Technol       Date:  2006-09-01       Impact factor: 9.028

7.  Degradation of 1,4-dioxane and cyclic ethers by an isolated fungus.

Authors:  Kunichika Nakamiya; Syunji Hashimoto; Hiroyasu Ito; John S Edmonds; Masatoshi Morita
Journal:  Appl Environ Microbiol       Date:  2005-03       Impact factor: 4.792

8.  Anaerobic biodegradation of 1,4-dioxane by sludge enriched with iron-reducing microorganisms.

Authors:  WeiRong Shen; Hong Chen; Shanshan Pan
Journal:  Bioresour Technol       Date:  2007-09-19       Impact factor: 9.642

9.  The mycobacterial binuclear iron monooxygenases require a specific chaperonin-like protein for functional expression in a heterologous host.

Authors:  Toshiki Furuya; Mika Hayashi; Hisashi Semba; Kuniki Kino
Journal:  FEBS J       Date:  2013-01-02       Impact factor: 5.542

10.  Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes.

Authors:  Jo Vandesompele; Katleen De Preter; Filip Pattyn; Bruce Poppe; Nadine Van Roy; Anne De Paepe; Frank Speleman
Journal:  Genome Biol       Date:  2002-06-18       Impact factor: 13.583

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  14 in total

1.  Discovery of an Inducible Toluene Monooxygenase That Cooxidizes 1,4-Dioxane and 1,1-Dichloroethylene in Propanotrophic Azoarcus sp. Strain DD4.

Authors:  Daiyong Deng; Dung Ngoc Pham; Fei Li; Mengyan Li
Journal:  Appl Environ Microbiol       Date:  2020-08-18       Impact factor: 4.792

2.  Microbial Community Analysis Provides Insights into the Effects of Tetrahydrofuran on 1,4-Dioxane Biodegradation.

Authors:  Yi Xiong; Olivia U Mason; Ashlee Lowe; Chao Zhou; Gang Chen; Youneng Tang
Journal:  Appl Environ Microbiol       Date:  2019-05-16       Impact factor: 4.792

3.  Identification of biomarker genes to predict biodegradation of 1,4-dioxane.

Authors:  Phillip B Gedalanga; Peerapong Pornwongthong; Rebecca Mora; Sheau-Yun Dora Chiang; Brett Baldwin; Dora Ogles; Shaily Mahendra
Journal:  Appl Environ Microbiol       Date:  2014-03-14       Impact factor: 4.792

4.  Degradation of 1,4-Dioxane by Xanthobacter sp. YN2.

Authors:  Fang Ma; Yingning Wang; Jixian Yang; Haijuan Guo; Delin Su; Lan Yu
Journal:  Curr Microbiol       Date:  2021-02-06       Impact factor: 2.188

5.  Isolation and Characterization of Novel Bacteria Capable of Degrading 1,4-Dioxane in the Presence of Diverse Co-Occurring Compounds.

Authors:  Tanmoy Roy Tusher; Takuya Shimizu; Chihiro Inoue; Mei-Fang Chien
Journal:  Microorganisms       Date:  2021-04-21

6.  A Multicomponent THF Hydroxylase Initiates Tetrahydrofuran Degradation in Cupriavidus metallidurans ZM02.

Authors:  Hao Ren; Haixia Wang; Yang Wang; Yiyang Chen; Zhenmei Lu
Journal:  Appl Environ Microbiol       Date:  2022-03-22       Impact factor: 5.005

7.  Trehalose promotes Rhodococcus sp. strain YYL colonization in activated sludge under tetrahydrofuran (THF) stress.

Authors:  Zhixing He; Kai Zhang; Haixia Wang; Zhenmei Lv
Journal:  Front Microbiol       Date:  2015-05-13       Impact factor: 5.640

8.  Draft Genome Sequence of the 1,4-Dioxane-Degrading Bacterium Pseudonocardia dioxanivorans BERK-1.

Authors:  Angel A Ramos-Garcia; Vijay Shankar; Christopher A Saski; Tom Hsiang; David L Freedman
Journal:  Genome Announc       Date:  2018-04-05

9.  1,4-Dioxane-degrading consortia can be enriched from uncontaminated soils: prevalence of Mycobacterium and soluble di-iron monooxygenase genes.

Authors:  Ya He; Jacques Mathieu; Marcio L B da Silva; Mengyan Li; Pedro J J Alvarez
Journal:  Microb Biotechnol       Date:  2017-10-06       Impact factor: 5.813

10.  Whole-Genome Sequence of the 1,4-Dioxane-Degrading Bacterium Mycobacterium dioxanotrophicus PH-06.

Authors:  Ya He; Kangfei Wei; Kaiwei Si; Jacques Mathieu; Mengyan Li; Pedro J J Alvarez
Journal:  Genome Announc       Date:  2017-08-31
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