Literature DB >> 24096318

Characterization of the Sandfly fever Naples species complex and description of a new Karimabad species complex (genus Phlebovirus, family Bunyaviridae).

Gustavo Palacios1, Robert B Tesh2, Nazir Savji3, Amelia P A Travassos da Rosa2, Hilda Guzman2, Ana Valeria Bussetti3, Aaloki Desai3, Jason Ladner1, Maripaz Sanchez-Seco4, W Ian Lipkin3.   

Abstract

Genomic and antigenic characterization of members of the Sandfly fever Naples virus (SFNV) complex reveals the presence of five clades that differ in their geographical distribution. Saint Floris and Gordil viruses, both found in Africa, form one clade; Punique, Granada and Massilia viruses, all isolated in the western Mediterranean, constitute a second; Toscana virus, a third; SFNV isolates from Italy, Cyprus, Egypt and India form a fourth; while Tehran virus and a Serbian isolate Yu 8/76, represent a fifth. Interestingly, this last clade appears not to express the second non-structural protein ORF. Karimabad virus, previously classified as a member of the SFNV complex, and Gabek Forest virus are distinct and form a new species complex (named Karimabad) in the Phlebovirus genus. In contrast with the high reassortment frequency observed in some South American phleboviruses, the only virus of the SFNV complex with evidence of reassortment was Granada virus.

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Year:  2013        PMID: 24096318      PMCID: PMC3917069          DOI: 10.1099/vir.0.056614-0

Source DB:  PubMed          Journal:  J Gen Virol        ISSN: 0022-1317            Impact factor:   3.891


  51 in total

1.  The S segment of rift valley fever phlebovirus (Bunyaviridae) carries determinants for attenuation and virulence in mice.

Authors:  P Vialat; A Billecocq; A Kohl; M Bouloy
Journal:  J Virol       Date:  2000-02       Impact factor: 5.103

2.  Evaluation of methods for detecting recombination from DNA sequences: computer simulations.

Authors:  D Posada; K A Crandall
Journal:  Proc Natl Acad Sci U S A       Date:  2001-11-20       Impact factor: 11.205

3.  RDP: detection of recombination amongst aligned sequences.

Authors:  D Martin; E Rybicki
Journal:  Bioinformatics       Date:  2000-06       Impact factor: 6.937

4.  Improved prediction of signal peptides: SignalP 3.0.

Authors:  Jannick Dyrløv Bendtsen; Henrik Nielsen; Gunnar von Heijne; Søren Brunak
Journal:  J Mol Biol       Date:  2004-07-16       Impact factor: 5.469

5.  Genetic characterization of Batai virus indicates a genomic reassortment between orthobunyaviruses in nature.

Authors:  T Yanase; T Kato; M Yamakawa; K Takayoshi; K Nakamura; T Kokuba; T Tsuda
Journal:  Arch Virol       Date:  2006-07-06       Impact factor: 2.574

6.  Gouleako virus isolated from West African mosquitoes constitutes a proposed novel genus in the family Bunyaviridae.

Authors:  M Marklewitz; S Handrick; W Grasse; A Kurth; A Lukashev; C Drosten; H Ellerbrok; F H Leendertz; G Pauli; S Junglen
Journal:  J Virol       Date:  2011-06-29       Impact factor: 5.103

7.  Rescue of infectious rift valley fever virus entirely from cDNA, analysis of virus lacking the NSs gene, and expression of a foreign gene.

Authors:  Tetsuro Ikegami; Sungyong Won; C J Peters; Shinji Makino
Journal:  J Virol       Date:  2006-03       Impact factor: 5.103

8.  Characterization of clone 13, a naturally attenuated avirulent isolate of Rift Valley fever virus, which is altered in the small segment.

Authors:  R Muller; J F Saluzzo; N Lopez; T Dreier; M Turell; J Smith; M Bouloy
Journal:  Am J Trop Med Hyg       Date:  1995-10       Impact factor: 2.345

9.  Variability of the NS(S) protein among Rift Valley fever virus isolates.

Authors:  A A Sall; P M de A Zanotto; H G Zeller; J P Digoutte; Y Thiongane; M Bouloy
Journal:  J Gen Virol       Date:  1997-11       Impact factor: 3.891

10.  Jatobal virus is a reassortant containing the small RNA of Oropouche virus.

Authors:  M F Saeed; H Wang; M Suderman; D W Beasley; A Travassos da Rosa; L Li; R E Shope; R B Tesh; A D Barrett
Journal:  Virus Res       Date:  2001-09       Impact factor: 3.303

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  19 in total

1.  Characterization of the Punta Toro species complex (genus Phlebovirus, family Bunyaviridae).

Authors:  Gustavo Palacios; Michael R Wiley; Amelia P A Travassos da Rosa; Hilda Guzman; Evelia Quiroz; Nazir Savji; Jean-Paul Carrera; Ana Valeria Bussetti; Jason T Ladner; W Ian Lipkin; Robert B Tesh
Journal:  J Gen Virol       Date:  2015-05-01       Impact factor: 3.891

2.  Genetic Characterization of Frijoles and Chilibre Species Complex Viruses (Genus Phlebovirus; Family Phenuiviridae) and Three Unclassified New World Phleboviruses.

Authors:  Holly R Hughes; Brandy J Russell; Amy J Lambert
Journal:  Am J Trop Med Hyg       Date:  2020-02       Impact factor: 2.345

3.  Isolation, genetic characterization, and seroprevalence of Adana virus, a novel phlebovirus belonging to the Salehabad virus complex, in Turkey.

Authors:  Cigdem Alkan; Sulaf Alwassouf; Géraldine Piorkowski; Laurence Bichaud; Seda Tezcan; Ender Dincer; Koray Ergunay; Yusuf Ozbel; Bulent Alten; Xavier de Lamballerie; Rémi N Charrel
Journal:  J Virol       Date:  2015-02-04       Impact factor: 5.103

4.  Toyo virus, a novel member of the Kaisodi group in the genus Uukuvirus (family Phenuiviridae) found in Haemaphysalis formosensis ticks in Japan.

Authors:  Daisuke Kobayashi; Ryusei Kuwata; Toshiya Kimura; Astri Nur Faizah; Yukiko Higa; Toshihiko Hayashi; Kyoko Sawabe; Haruhiko Isawa
Journal:  Arch Virol       Date:  2021-08-02       Impact factor: 2.574

5.  Co-circulation of a novel phlebovirus and Massilia virus in sandflies, Portugal.

Authors:  Fátima Amaro; Líbia Zé-Zé; Maria J Alves; Jessica Börstler; Joachim Clos; Stephan Lorenzen; Stefanie Christine Becker; Jonas Schmidt-Chanasit; Daniel Cadar
Journal:  Virol J       Date:  2015-10-24       Impact factor: 4.099

6.  2020 taxonomic update for phylum Negarnaviricota (Riboviria: Orthornavirae), including the large orders Bunyavirales and Mononegavirales.

Authors:  Jens H Kuhn; Scott Adkins; Daniela Alioto; Sergey V Alkhovsky; Gaya K Amarasinghe; Simon J Anthony; Tatjana Avšič-Županc; María A Ayllón; Justin Bahl; Anne Balkema-Buschmann; Matthew J Ballinger; Tomáš Bartonička; Christopher Basler; Sina Bavari; Martin Beer; Dennis A Bente; Éric Bergeron; Brian H Bird; Carol Blair; Kim R Blasdell; Steven B Bradfute; Rachel Breyta; Thomas Briese; Paul A Brown; Ursula J Buchholz; Michael J Buchmeier; Alexander Bukreyev; Felicity Burt; Nihal Buzkan; Charles H Calisher; Mengji Cao; Inmaculada Casas; John Chamberlain; Kartik Chandran; Rémi N Charrel; Biao Chen; Michela Chiumenti; Il-Ryong Choi; J Christopher S Clegg; Ian Crozier; John V da Graça; Elena Dal Bó; Alberto M R Dávila; Juan Carlos de la Torre; Xavier de Lamballerie; Rik L de Swart; Patrick L Di Bello; Nicholas Di Paola; Francesco Di Serio; Ralf G Dietzgen; Michele Digiaro; Valerian V Dolja; Olga Dolnik; Michael A Drebot; Jan Felix Drexler; Ralf Dürrwald; Lucie Dufkova; William G Dundon; W Paul Duprex; John M Dye; Andrew J Easton; Hideki Ebihara; Toufic Elbeaino; Koray Ergünay; Jorlan Fernandes; Anthony R Fooks; Pierre B H Formenty; Leonie F Forth; Ron A M Fouchier; Juliana Freitas-Astúa; Selma Gago-Zachert; George Fú Gāo; María Laura García; Adolfo García-Sastre; Aura R Garrison; Aiah Gbakima; Tracey Goldstein; Jean-Paul J Gonzalez; Anthony Griffiths; Martin H Groschup; Stephan Günther; Alexandro Guterres; Roy A Hall; John Hammond; Mohamed Hassan; Jussi Hepojoki; Satu Hepojoki; Udo Hetzel; Roger Hewson; Bernd Hoffmann; Seiji Hongo; Dirk Höper; Masayuki Horie; Holly R Hughes; Timothy H Hyndman; Amara Jambai; Rodrigo Jardim; Dàohóng Jiāng; Qi Jin; Gilda B Jonson; Sandra Junglen; Serpil Karadağ; Karen E Keller; Boris Klempa; Jonas Klingström; Gary Kobinger; Hideki Kondō; Eugene V Koonin; Mart Krupovic; Gael Kurath; Ivan V Kuzmin; Lies Laenen; Robert A Lamb; Amy J Lambert; Stanley L Langevin; Benhur Lee; Elba R S Lemos; Eric M Leroy; Dexin Li; Jiànróng Lǐ; Mifang Liang; Wénwén Liú; Yàn Liú; Igor S Lukashevich; Piet Maes; William Marciel de Souza; Marco Marklewitz; Sergio H Marshall; Giovanni P Martelli; Robert R Martin; Shin-Yi L Marzano; Sébastien Massart; John W McCauley; Nicole Mielke-Ehret; Angelantonio Minafra; Maria Minutolo; Ali Mirazimi; Hans-Peter Mühlbach; Elke Mühlberger; Rayapati Naidu; Tomohide Natsuaki; Beatriz Navarro; José A Navarro; Sergey V Netesov; Gabriele Neumann; Norbert Nowotny; Márcio R T Nunes; Are Nylund; Arnfinn L Økland; Renata C Oliveira; Gustavo Palacios; Vicente Pallas; Bernadett Pályi; Anna Papa; Colin R Parrish; Alex Pauvolid-Corrêa; Janusz T Pawęska; Susan Payne; Daniel R Pérez; Florian Pfaff; Sheli R Radoshitzky; Aziz-Ul Rahman; Pedro L Ramos-González; Renato O Resende; Carina A Reyes; Bertus K Rima; Víctor Romanowski; Gabriel Robles Luna; Paul Rota; Dennis Rubbenstroth; Jonathan A Runstadler; Daniel Ruzek; Sead Sabanadzovic; Jiří Salát; Amadou Alpha Sall; Maria S Salvato; Kamil Sarpkaya; Takahide Sasaya; Martin Schwemmle; Muhammad Z Shabbir; Xiǎohóng Shí; Zhènglì Shí; Yukio Shirako; Peter Simmonds; Jana Širmarová; Manuela Sironi; Sophie Smither; Teemu Smura; Jin-Won Song; Kirsten M Spann; Jessica R Spengler; Mark D Stenglein; David M Stone; Petra Straková; Ayato Takada; Robert B Tesh; Natalie J Thornburg; Keizō Tomonaga; Noël Tordo; Jonathan S Towner; Massimo Turina; Ioannis Tzanetakis; Rainer G Ulrich; Anna Maria Vaira; Bernadette van den Hoogen; Arvind Varsani; Nikos Vasilakis; Martin Verbeek; Victoria Wahl; Peter J Walker; Hui Wang; Jianwei Wang; Xifeng Wang; Lin-Fa Wang; Tàiyún Wèi; Heather Wells; Anna E Whitfield; John V Williams; Yuri I Wolf; Zhìqiáng Wú; Xin Yang; Xīnglóu Yáng; Xuejie Yu; Natalya Yutin; F Murilo Zerbini; Tong Zhang; Yong-Zhen Zhang; Guohui Zhou; Xueping Zhou
Journal:  Arch Virol       Date:  2020-09-04       Impact factor: 2.574

7.  Viral metagenomic analysis of feces of wild small carnivores.

Authors:  Rogier Bodewes; Aritz Ruiz-Gonzalez; Claudia M E Schapendonk; Judith M A van den Brand; Albert D M E Osterhaus; Saskia L Smits
Journal:  Virol J       Date:  2014-05-15       Impact factor: 4.099

8.  Sandfly-Borne Phlebovirus Isolations from Turkey: New Insight into the Sandfly fever Sicilian and Sandfly fever Naples Species.

Authors:  Cigdem Alkan; Ozge Erisoz Kasap; Bulent Alten; Xavier de Lamballerie; Rémi N Charrel
Journal:  PLoS Negl Trop Dis       Date:  2016-03-23

9.  Genetic and Phylogenetic Characterization of Tataguine and Witwatersrand Viruses and Other Orthobunyaviruses of the Anopheles A, Capim, Guamá, Koongol, Mapputta, Tete, and Turlock Serogroups.

Authors:  Alexey M Shchetinin; Dmitry K Lvov; Petr G Deriabin; Andrey G Botikov; Asya K Gitelman; Jens H Kuhn; Sergey V Alkhovsky
Journal:  Viruses       Date:  2015-11-23       Impact factor: 5.048

Review 10.  Phleboviruses and the Type I Interferon Response.

Authors:  Jennifer Deborah Wuerth; Friedemann Weber
Journal:  Viruses       Date:  2016-06-22       Impact factor: 5.048

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