Literature DB >> 24093946

Multiorder correction algorithms to remove image distortions from mass spectrometry imaging data sets.

Florian Gerber1, Florian Marty, Gert B Eijkel, Konrad Basler, Erich Brunner, Reinhard Furrer, Ron M A Heeren.   

Abstract

Time-of-flight secondary ion mass spectrometry imaging is a rapidly evolving technology. Its main application is the study of the distribution of small molecules on biological tissues. The sequential image acquisition process remains susceptible to measurement distortions that can render imaging data less analytically useful. Most of these artifacts show a repetitive nature from tile to tile. Here we statistically describe these distortions and derive two different algorithms to correct them. Both a generalized linear model approach and the linear discriminant analysis approach are able to increase image quality for negative and positive ion mode data sets. Additionally, performing simulation studies with repetitive and nonrepetitive tiling error we show that both algorithms are only removing repetitive distortions. It is further shown that the spectral component of the data set is not altered by the use of these correction methods. Both algorithms presented in this work greatly increase the image quality and improve the analytical usefulness of distorted images dramatically.

Mesh:

Year:  2013        PMID: 24093946     DOI: 10.1021/ac402018e

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  1 in total

1.  Precise Anatomic Localization of Accumulated Lipids in Mfp2 Deficient Murine Brains Through Automated Registration of SIMS Images to the Allen Brain Atlas.

Authors:  Karolina Škrášková; Artem Khmelinskii; Walid M Abdelmoula; Stephanie De Munter; Myriam Baes; Liam McDonnell; Jouke Dijkstra; Ron M A Heeren
Journal:  J Am Soc Mass Spectrom       Date:  2015-04-28       Impact factor: 3.109

  1 in total

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