Literature DB >> 24092955

Modelling human embryoid body cell adhesion to a combinatorial library of polymer surfaces.

V Chandana Epa1, Jing Yang, Ying Mei, Andrew L Hook, Robert Langer, Daniel G Anderson, Martyn C Davies, Morgan R Alexander, David A Winkler.   

Abstract

Designing materials to control biology is an intense focus of biomaterials and regenerative medicine research. Discovering and designing materials with appropriate biological compatibility or active control of cells and tissues is being increasingly undertaken using high throughput synthesis and assessment methods. We report a relatively simple but powerful machine-learning method of generating models that link microscopic or molecular properties of polymers or other materials to their biological effects. We illustrate the potential of these methods by developing the first robust, predictive, quantitative, and purely computational models of adhesion of human embryonic stem cell embryoid bodies (hEB) to the surfaces of a 496-member polymer micro array library.

Entities:  

Year:  2012        PMID: 24092955      PMCID: PMC3787298          DOI: 10.1039/C2JM34782B

Source DB:  PubMed          Journal:  J Mater Chem        ISSN: 0959-9428


  17 in total

1.  Nanoliter-scale synthesis of arrayed biomaterials and application to human embryonic stem cells.

Authors:  Daniel G Anderson; Shulamit Levenberg; Robert Langer
Journal:  Nat Biotechnol       Date:  2004-06-13       Impact factor: 54.908

2.  Robust, quantitative tools for modelling ex-vivo expansion of haematopoietic stem cells and progenitors.

Authors:  David A Winkler; Frank R Burden
Journal:  Mol Biosyst       Date:  2012-01-26

3.  Differential effects of substrate modulus on human vascular endothelial, smooth muscle, and fibroblastic cells.

Authors:  Karyn G Robinson; Ting Nie; Aaron D Baldwin; Elaine C Yang; Kristi L Kiick; Robert E Akins
Journal:  J Biomed Mater Res A       Date:  2012-02-28       Impact factor: 4.396

4.  The impact of contact angle on the biocompatibility of biomaterials.

Authors:  Kara L Menzies; Lyndon Jones
Journal:  Optom Vis Sci       Date:  2010-06       Impact factor: 1.973

Review 5.  Of molecules and humans.

Authors:  Johann Gasteiger
Journal:  J Med Chem       Date:  2006-11-02       Impact factor: 7.446

6.  Polymer surface functionalities that control human embryoid body cell adhesion revealed by high throughput surface characterization of combinatorial material microarrays.

Authors:  Jing Yang; Ying Mei; Andrew L Hook; Michael Taylor; Andrew J Urquhart; Said R Bogatyrev; Robert Langer; Daniel G Anderson; Martyn C Davies; Morgan R Alexander
Journal:  Biomaterials       Date:  2010-09-15       Impact factor: 12.479

7.  Partial least squares regression as a powerful tool for investigating large combinatorial polymer libraries.

Authors:  Michael Taylor; Andrew J Urquhart; Daniel G Anderson; Robert Langer; Martyn C Davies; Morgan R Alexander
Journal:  Surf Interface Anal       Date:  2009-02       Impact factor: 1.607

8.  TOF-SIMS analysis of a 576 micropatterned copolymer array to reveal surface moieties that control wettability.

Authors:  Andrew J Urquhart; Michael Taylor; Daniel G Anderson; Robert Langer; Martyn C Davies; Morgan R Alexander
Journal:  Anal Chem       Date:  2007-11-29       Impact factor: 6.986

9.  Combinatorial development of biomaterials for clonal growth of human pluripotent stem cells.

Authors:  Ying Mei; Krishanu Saha; Said R Bogatyrev; Jing Yang; Andrew L Hook; Z Ilke Kalcioglu; Seung-Woo Cho; Maisam Mitalipova; Neena Pyzocha; Fredrick Rojas; Krystyn J Van Vliet; Martyn C Davies; Morgan R Alexander; Robert Langer; Rudolf Jaenisch; Daniel G Anderson
Journal:  Nat Mater       Date:  2010-08-22       Impact factor: 43.841

10.  Adhesion of cells to polystyrene surfaces.

Authors:  A S Curtis; J V Forrester; C McInnes; F Lawrie
Journal:  J Cell Biol       Date:  1983-11       Impact factor: 10.539

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  10 in total

Review 1.  QSAR without borders.

Authors:  Eugene N Muratov; Jürgen Bajorath; Robert P Sheridan; Igor V Tetko; Dmitry Filimonov; Vladimir Poroikov; Tudor I Oprea; Igor I Baskin; Alexandre Varnek; Adrian Roitberg; Olexandr Isayev; Stefano Curtarolo; Denis Fourches; Yoram Cohen; Alan Aspuru-Guzik; David A Winkler; Dimitris Agrafiotis; Artem Cherkasov; Alexander Tropsha
Journal:  Chem Soc Rev       Date:  2020-05-01       Impact factor: 54.564

Review 2.  Application of biomaterials to advance induced pluripotent stem cell research and therapy.

Authors:  Zhixiang Tong; Aniruddh Solanki; Allison Hamilos; Oren Levy; Kendall Wen; Xiaolei Yin; Jeffrey M Karp
Journal:  EMBO J       Date:  2015-03-12       Impact factor: 11.598

Review 3.  Why the impact of mechanical stimuli on stem cells remains a challenge.

Authors:  Roman Goetzke; Antonio Sechi; Laura De Laporte; Sabine Neuss; Wolfgang Wagner
Journal:  Cell Mol Life Sci       Date:  2018-05-04       Impact factor: 9.261

Review 4.  Materials for stem cell factories of the future.

Authors:  Adam D Celiz; James G W Smith; Robert Langer; Daniel G Anderson; David A Winkler; David A Barrett; Martyn C Davies; Lorraine E Young; Chris Denning; Morgan R Alexander
Journal:  Nat Mater       Date:  2014-06       Impact factor: 43.841

5.  Prediction of Broad-Spectrum Pathogen Attachment to Coating Materials for Biomedical Devices.

Authors:  Paulius Mikulskis; Andrew Hook; Adam A Dundas; Derek Irvine; Olutoba Sanni; Daniel Anderson; Robert Langer; Morgan R Alexander; Paul Williams; David A Winkler
Journal:  ACS Appl Mater Interfaces       Date:  2018-01-02       Impact factor: 10.383

6.  Chemically diverse polymer microarrays and high throughput surface characterisation: a method for discovery of materials for stem cell culture†Electronic supplementary information (ESI) available. See DOI: 10.1039/c4bm00054dClick here for additional data file.

Authors:  A D Celiz; J G W Smith; A K Patel; R Langer; D G Anderson; D A Barrett; L E Young; M C Davies; C Denning; M R Alexander
Journal:  Biomater Sci       Date:  2014-05-12       Impact factor: 6.843

7.  Analysis and prediction of defects in UV photo-initiated polymer microarrays.

Authors:  Andrew L Hook; David J Scurr; Jonathan C Burley; Robert Langer; Daniel G Anderson; Martyn C Davies; Morgan R Alexander
Journal:  J Mater Chem B       Date:  2012-12-20       Impact factor: 6.331

8.  Materials Genome in Action: Identifying the Performance Limits of Physical Hydrogen Storage.

Authors:  Aaron W Thornton; Cory M Simon; Jihan Kim; Ohmin Kwon; Kathryn S Deeg; Kristina Konstas; Steven J Pas; Matthew R Hill; David A Winkler; Maciej Haranczyk; Berend Smit
Journal:  Chem Mater       Date:  2017-03-08       Impact factor: 9.811

Review 9.  Automation and data-driven design of polymer therapeutics.

Authors:  Rahul Upadhya; Shashank Kosuri; Matthew Tamasi; Travis A Meyer; Supriya Atta; Michael A Webb; Adam J Gormley
Journal:  Adv Drug Deliv Rev       Date:  2020-11-24       Impact factor: 15.470

Review 10.  Engineering serendipity: High-throughput discovery of materials that resist bacterial attachment.

Authors:  E P Magennis; A L Hook; M C Davies; C Alexander; P Williams; M R Alexander
Journal:  Acta Biomater       Date:  2015-11-28       Impact factor: 8.947

  10 in total

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