| Literature DB >> 24086328 |
Mélanie Trouvay1, Georges Palazon, Franck Berger, Béatrice Volney, Denis Blanchet, Emilie Faway, Damien Donato, Eric Legrand, Bernard Carme, Lise Musset.
Abstract
BACKGROUND: Care for malaria patients in endemic areas has been improved through the increasing use of Rapid Diagnostic Tests (RDTs). Most RDTs target the histidine-rich protein-2 antigen (PfHRP2) to detect P. falciparum, as it is abundant and shows great heat stability. However, their use in South America has been widely questioned following a recent publication that pinpoints the high prevalence of Peruvian field isolates lacking the gene encoding this protein. In the remote rural health centers of French Guiana, RDTs are the main diagnosis tools. Therefore, a study of PfHRP2 RDT performances and pfhrp2 genotyping was conducted to determine whether a replacement of the current pLDH-based kit could be considered.Entities:
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Year: 2013 PMID: 24086328 PMCID: PMC3781074 DOI: 10.1371/journal.pone.0074269
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Figure 1Map of French Guiana, part of Amazonia, South America. Figures in brackets are the number of isolates collected in each health care institution then analysed retrospectively to evaluate the prevalence of pfhrp2 deletion in French Guiana.
Primer sequences, PCR conditions and expected product sizes.
| Gene name | Primername | Primer sequence | [MgCl2] | PCR conditions | Product size | Sensitivity (parasite/µl of blood) | |
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| A262 |
| 2 mM | 94°C for 15 min; 94°C for 30 sec; 55°C for 30 sec; 72°C for 1 min; 72°C for 10 min | 35 cycles | 315 bp | 25 |
| A263 |
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| A118 |
| 2 mM | 94°C for 15 min; 94°C for 30 sec; 55°C for 30 sec; 72°C for 1 min; 72°C for 10 min | 35 cycles | 1166 bp | 25 |
| A264 |
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| A266 |
| 4 mM | As above with an annealing temperature at 60°C | 772 bp** | 50 | |
| A261 |
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Based on the HB3 reference sequence (Pubmed accession number: AANS01002100) **Based on the 3D7 reference sequence (Pubmed accession number: NC_004331).
Study of the SD Malaria Ag P.f/pan® performances compared to microscopy as gold standard, French Guiana, July 2010–July 2011.
| Microscopy (n = 28 discrepancies) | ||||
| SD Malaria Ag P.f/pan® |
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| Negative | n |
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| Negative |
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Entirely concordant results are shown in the grey fields.
Diagnosis results after analysis by PCR of the discrepancies observed between the SD Malaria Ag P.f/pan® assay and microscopy, French Guiana, July 2010–July 2011.
| Microscopy results | ||||||||
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| Neg | ||||||
| PCR results | RDT |
| Neg |
| Neg |
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| n |
| P. falciparum | 1 | 1 | 1 | |||||
| Other Plasmodium sp. | 1 | 3 | 14 | 1 | 20 | |||
| Negative | 1 | 5 | 1 | 7 | ||||
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Results suggesting the presence of pfhrp2 and/or pfhrp3 deleted parasites in the isolates are shown in the grey fields.
Sequence of P. falciparum histidine-rich protein 2 (PfHRP2) exon 2 of isolates from French Guiana, 2010.
| Group | n | PfHRP2 amino acid sequence | |||||||||||||||||||||||||||||||||||||||||||||||||
| 5′end (from A13to D56) | Motif | 3′end | |||||||||||||||||||||||||||||||||||||||||||||||||
| 1a | 14 | AVFA……HVDD(Identical to HB3) | 1 | 1 | 1 | 1 | 2 | 3 | 2 | 6 | 7 | 7 | 7 | 2 | 2 | 2 | 2 | 2 | 3 | 5 | 5 | 2 | 8 | 2 | 7 | 6 | 7 | 7 | 6 | 7 | 7 | 7 | 10 | 10 | 12 | CLRH | |||||||||||||||
| 1b | 4 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 2 | 2 | 2 | 2 | 3 | 5 | 5 | 7 | 8 | 2 | 7 | 6 | 7 | 7 | 6 | 7 | 7 | 6 | 6 | 2 | 2 | 10 | 10 | ||||||||||||||||||||
| 1c | 4 | 1 | 1 | 1 | 2 | 3 | 2 | 6 | 7 | 7 | 7 | 2 | 2 | 2 | 2 | 2 | 3 | 5 | 5 | 2 | 8 | 2 | 7 | 6 | 7 | 7 | 6 | 7 | 7 | 6 | 7 | 7 | 10 | 10 | 10 | ||||||||||||||||
| 1d | 2 | 1 | 1 | 1 | 2 | 3 | 2 | 6 | 7 | 7 | 7 | 2 | 2 | 2 | 2 | 2 | 3 | 5 | 5 | 2 | 8 | 2 | 7 | 6 | 7 | 7 | 6 | 7 | 7 | 10 | 10 | 10 | |||||||||||||||||||
| 2a | 3 | AVFA……HVDD | 1 | 2 | 2 | 2 | 3 | 2 | 6 | 7 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 3 | 5 | 7 | 9 | 2 | 7 | 6 | 7 | 7 | 7 | 6 | 2 | 10 | 10 | 12 | CLRH | |||||||||||||||||
| 2b | 1 | 1 | 2 | 2 | 3 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 3 | 5 | 7 | 8 | 2 | 7 | 6 | 2 | 7 | 7 | 6 | 7 | 6 | 7 | 7 | 6 | 6 | 7 | 10 | 6 | 10 | ||||||||||||||||||
| 3 | 1 | AVFA……HVDD | 1 | 1 | 2 | 2 | 3 | 2 | 6 | 7 | 7 | 7 | 7 | 7 | 7 | 2 | 2 | 2 | 2 | 2 | 2 | 3 | 2 | 6 | 6 | 7 | 7 | 6 | 7 | 7 | 6 | 2 | 12 | CLRH | |||||||||||||||||
Repeated sequences were encoded using codes previously published by Baker et al., 2005 [9].