Literature DB >> 24086043

Advances in understanding the complex mechanisms of DNA interstrand cross-link repair.

Cheryl Clauson1, Orlando D Schärer, Laura Niedernhofer.   

Abstract

DNA interstrand cross-links (ICLs) are lesions caused by a variety of endogenous metabolites, environmental exposures, and cancer chemotherapeutic agents that have two reactive groups. The common feature of these diverse lesions is that two nucleotides on opposite strands are covalently joined. ICLs prevent the separation of two DNA strands and therefore essential cellular processes including DNA replication and transcription. ICLs are mainly detected in S phase when a replication fork stalls at an ICL. Damage signaling and repair of ICLs are promoted by the Fanconi anemia pathway and numerous posttranslational modifications of DNA repair and chromatin structural proteins. ICLs are also detected and repaired in nonreplicating cells, although the mechanism is less clear. A unique feature of ICL repair is that both strands of DNA must be incised to completely remove the lesion. This is accomplished in sequential steps to prevent creating multiple double-strand breaks. Unhooking of an ICL from one strand is followed by translesion synthesis to fill the gap and create an intact duplex DNA, harboring a remnant of the ICL. Removal of the lesion from the second strand is likely accomplished by nucleotide excision repair. Inadequate repair of ICLs is particularly detrimental to rapidly dividing cells, explaining the bone marrow failure characteristic of Fanconi anemia and why cross-linking agents are efficacious in cancer therapy. Herein, recent advances in our understanding of ICLs and the biological responses they trigger are discussed.

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Year:  2013        PMID: 24086043      PMCID: PMC4123742          DOI: 10.1101/cshperspect.a012732

Source DB:  PubMed          Journal:  Cold Spring Harb Perspect Biol        ISSN: 1943-0264            Impact factor:   10.005


  156 in total

Review 1.  Translesion DNA synthesis polymerases in DNA interstrand crosslink repair.

Authors:  The Vinh Ho; Orlando D Schärer
Journal:  Environ Mol Mutagen       Date:  2010-07       Impact factor: 3.216

2.  Mcm8 and Mcm9 form a complex that functions in homologous recombination repair induced by DNA interstrand crosslinks.

Authors:  Kohei Nishimura; Masamichi Ishiai; Kazuki Horikawa; Tatsuo Fukagawa; Minoru Takata; Haruhiko Takisawa; Masato T Kanemaki
Journal:  Mol Cell       Date:  2012-07-05       Impact factor: 17.970

3.  The MRT-1 nuclease is required for DNA crosslink repair and telomerase activity in vivo in Caenorhabditis elegans.

Authors:  Bettina Meier; Louise J Barber; Yan Liu; Ludmila Shtessel; Simon J Boulton; Anton Gartner; Shawn Ahmed
Journal:  EMBO J       Date:  2009-09-24       Impact factor: 11.598

4.  The XPA-binding domain of ERCC1 is required for nucleotide excision repair but not other DNA repair pathways.

Authors:  Barbara Orelli; T Brooke McClendon; Oleg V Tsodikov; Tom Ellenberger; Laura J Niedernhofer; Orlando D Schärer
Journal:  J Biol Chem       Date:  2009-11-23       Impact factor: 5.157

Review 5.  DNA cross-link induced by trans-4-hydroxynonenal.

Authors:  Hai Huang; Ivan D Kozekov; Albena Kozekova; Hao Wang; R Stephen Lloyd; Carmelo J Rizzo; Michael P Stone
Journal:  Environ Mol Mutagen       Date:  2010-07       Impact factor: 3.216

6.  Mutation of the RAD51C gene in a Fanconi anemia-like disorder.

Authors:  Fiona Vaz; Helmut Hanenberg; Beatrice Schuster; Karen Barker; Constanze Wiek; Verena Erven; Kornelia Neveling; Daniela Endt; Ian Kesterton; Flavia Autore; Franca Fraternali; Marcel Freund; Linda Hartmann; David Grimwade; Roland G Roberts; Heiner Schaal; Shehla Mohammed; Nazneen Rahman; Detlev Schindler; Christopher G Mathew
Journal:  Nat Genet       Date:  2010-04-18       Impact factor: 38.330

7.  Evidence for the involvement of human DNA polymerase N in the repair of DNA interstrand cross-links.

Authors:  Laura Zietlow; Leigh Anne Smith; Mika Bessho; Tadayoshi Bessho
Journal:  Biochemistry       Date:  2009-12-15       Impact factor: 3.162

8.  Inactivation of murine Usp1 results in genomic instability and a Fanconi anemia phenotype.

Authors:  Jung Min Kim; Kalindi Parmar; Min Huang; David M Weinstock; Carrie Ann Ruit; Jeffrey L Kutok; Alan D D'Andrea
Journal:  Dev Cell       Date:  2009-02       Impact factor: 12.270

9.  Eme1 is involved in DNA damage processing and maintenance of genomic stability in mammalian cells.

Authors:  Jacinth Abraham; Bénédicte Lemmers; M Prakash Hande; Mary Ellen Moynahan; Charly Chahwan; Alberto Ciccia; Jeroen Essers; Katsuhiro Hanada; Richard Chahwan; Aik Kia Khaw; Peter McPherson; Amro Shehabeldin; Rob Laister; Cheryl Arrowsmith; Roland Kanaar; Stephen C West; Maria Jasin; Razqallah Hakem
Journal:  EMBO J       Date:  2003-11-17       Impact factor: 11.598

10.  Repair of interstrand cross-links in DNA of Saccharomyces cerevisiae requires two systems for DNA repair: the RAD3 system and the RAD51 system.

Authors:  W J Jachymczyk; R C von Borstel; M R Mowat; P J Hastings
Journal:  Mol Gen Genet       Date:  1981
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  119 in total

1.  Correlation of Thermal Stability and Structural Distortion of DNA Interstrand Cross-Links Produced from Oxidized Abasic Sites with Their Selective Formation and Repair.

Authors:  Souradyuti Ghosh; Marc M Greenberg
Journal:  Biochemistry       Date:  2015-10-01       Impact factor: 3.162

2.  Covalent DNA-Protein Cross-Linking by Phosphoramide Mustard and Nornitrogen Mustard in Human Cells.

Authors:  Arnold Groehler; Peter W Villalta; Colin Campbell; Natalia Tretyakova
Journal:  Chem Res Toxicol       Date:  2016-01-20       Impact factor: 3.739

3.  Mutagenic Bypass of an Oxidized Abasic Lesion-Induced DNA Interstrand Cross-Link Analogue by Human Translesion Synthesis DNA Polymerases.

Authors:  Wenyan Xu; Adam Ouellette; Souradyuti Ghosh; Tylor C O'Neill; Marc M Greenberg; Linlin Zhao
Journal:  Biochemistry       Date:  2015-12-14       Impact factor: 3.162

Review 4.  Structure and bioactivity of colibactin.

Authors:  Kevin M Wernke; Mengzhao Xue; Alina Tirla; Chung Sub Kim; Jason M Crawford; Seth B Herzon
Journal:  Bioorg Med Chem Lett       Date:  2020-05-23       Impact factor: 2.823

Review 5.  A role for the base excision repair enzyme NEIL3 in replication-dependent repair of interstrand DNA cross-links derived from psoralen and abasic sites.

Authors:  Zhiyu Yang; Maryam Imani Nejad; Jacqueline Gamboa Varela; Nathan E Price; Yinsheng Wang; Kent S Gates
Journal:  DNA Repair (Amst)       Date:  2017-02-20

Review 6.  Replicating damaged DNA in eukaryotes.

Authors:  Nimrat Chatterjee; Wolfram Siede
Journal:  Cold Spring Harb Perspect Biol       Date:  2013-12-01       Impact factor: 10.005

7.  Oxidatively Generated Guanine(C8)-Thymine(N3) Intrastrand Cross-links in Double-stranded DNA Are Repaired by Base Excision Repair Pathways.

Authors:  Ibtissam Talhaoui; Vladimir Shafirovich; Zhi Liu; Christine Saint-Pierre; Zhiger Akishev; Bakhyt T Matkarimov; Didier Gasparutto; Nicholas E Geacintov; Murat Saparbaev
Journal:  J Biol Chem       Date:  2015-04-22       Impact factor: 5.157

Review 8.  Fanconi anemia and the underlying causes of genomic instability.

Authors:  Julie Rageul; Hyungjin Kim
Journal:  Environ Mol Mutagen       Date:  2020-02-06       Impact factor: 3.216

9.  Replication-Dependent Unhooking of DNA Interstrand Cross-Links by the NEIL3 Glycosylase.

Authors:  Daniel R Semlow; Jieqiong Zhang; Magda Budzowska; Alexander C Drohat; Johannes C Walter
Journal:  Cell       Date:  2016-09-29       Impact factor: 41.582

10.  Human CST abundance determines recovery from diverse forms of DNA damage and replication stress.

Authors:  Feng Wang; Jason Stewart; Carolyn M Price
Journal:  Cell Cycle       Date:  2014       Impact factor: 4.534

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