Literature DB >> 24080205

Identification of suitable reference genes in bone marrow stromal cells from osteoarthritic donors.

Theresa Schildberg1, Juliane Rauh, Henriette Bretschneider, Maik Stiehler.   

Abstract

Bone marrow stromal cells (BMSCs) are key cellular components for musculoskeletal tissue engineering strategies. Furthermore, recent data suggest that BMSCs are involved in the development of Osteoarthritis (OA) being a frequently occurring degenerative joint disease. Reliable reference genes for the molecular evaluation of BMSCs derived from donors exhibiting OA as a primary co-morbidity have not been reported on yet. Hence, the aim of the study was to identify reference genes suitable for comparative gene expression analyses using OA-BMSCs. Passage 1 bone marrow derived BMSCs were isolated from n=13 patients with advanced stage idiopathic hip osteoarthritis and n=15 age-matched healthy donors. The expression of 31 putative reference genes was analyzed by quantitative reverse transcription polymerase chain reaction (qRT-PCR) using a commercially available TaqMan(®) assay. Calculating the coefficient of variation (CV), mRNA expression stability was determined and afterwards validated using geNorm and NormFinder algorithms. Importin 8 (IPO8), TATA box binding protein (TBP), and cancer susceptibility candidate 3 (CASC3) were identified as the most stable reference genes. Notably, commonly used reference genes, e.g. beta-actin (ACTB) and beta-2-microglobulin (B2M) were among the most unstable genes. For normalization of gene expression data of OA-BMSCs the combined use of IPO8, TBP, and CASC3 gene is recommended.
© 2013.

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Year:  2013        PMID: 24080205     DOI: 10.1016/j.scr.2013.08.015

Source DB:  PubMed          Journal:  Stem Cell Res        ISSN: 1873-5061            Impact factor:   2.020


  6 in total

1.  Stability of housekeeping genes in inflamed joints of spontaneous and collagen-induced arthritis in DBA/1 mice.

Authors:  Celia María Quiñonez-Flores; Salma Marcela López-Loeza; César Pacheco-Tena; Perla María Muñoz-Morales; Samara Acosta-Jiménez; Susana Aideé González-Chávez
Journal:  Inflamm Res       Date:  2021-04-26       Impact factor: 4.575

2.  Identification of stable reference genes for gene expression analysis of three-dimensional cultivated human bone marrow-derived mesenchymal stromal cells for bone tissue engineering.

Authors:  Juliane Rauh; Angela Jacobi; Maik Stiehler
Journal:  Tissue Eng Part C Methods       Date:  2014-08-11       Impact factor: 3.056

3.  miR-22-5p and miR-29a-5p Are Reliable Reference Genes for Analyzing Extracellular Vesicle-Associated miRNAs in Adipose-Derived Mesenchymal Stem Cells and Are Stable under Inflammatory Priming Mimicking Osteoarthritis Condition.

Authors:  Enrico Ragni; Carlotta Perucca Orfei; Paola De Luca; Marco Viganò; Alessandra Colombini; Gaia Lugano; Valentina Bollati; Laura de Girolamo
Journal:  Stem Cell Rev Rep       Date:  2019-10       Impact factor: 5.739

4.  Stable Reference Genes for qPCR Analysis in BM-MSCs Undergoing Osteogenic Differentiation within 3D Hyaluronan-Based Hydrogels.

Authors:  Johannes Hasler; Luan Phelipe Hatt; Martin James Stoddart; Angela Rita Armiento
Journal:  Int J Mol Sci       Date:  2020-12-02       Impact factor: 5.923

Review 5.  With Reference to Reference Genes: A Systematic Review of Endogenous Controls in Gene Expression Studies.

Authors:  Joanne R Chapman; Jonas Waldenström
Journal:  PLoS One       Date:  2015-11-10       Impact factor: 3.240

6.  DNA methylation profile is a quantitative measure of biological aging in children.

Authors:  Xiaohui Wu; Weidan Chen; Fangqin Lin; Qingsheng Huang; Jiayong Zhong; Huan Gao; Yanyan Song; Huiying Liang
Journal:  Aging (Albany NY)       Date:  2019-11-22       Impact factor: 5.682

  6 in total

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