Literature DB >> 24078715

Reporting results from whole-genome and whole-exome sequencing in clinical practice: a proposal for Canada?

Ma'n H Zawati1, David Parry, Adrian Thorogood, Minh Thu Nguyen, Kym M Boycott, David Rosenblatt, Bartha Maria Knoppers.   

Abstract

PURPOSE: This article proposes recommendations for the use of whole-genome and whole-exome (WGS/WES) sequencing in clinical practice, endorsed by the board of directors of the Canadian College of Medical Geneticists. The publication of statements and recommendations by several international and national organisations on clinical WGS/WES has prompted a need for Canadian-specific guidance.
METHODS: A multi-disciplinary group consisting of lawyers, ethicists, genetic researchers, and clinical geneticists was assembled to review existing guidelines on WGS/WES and identify provisions relevant to the Canadian context.
RESULTS: Definitions were provided to orient the recommendations and to minimize confusion with other recommendations. Recommendations include the following: WGS/WES should be used in a judicious and cost-efficient manner; WGS/WES should be used to answer a clinical question; and physicians need to explain to adult patients the nature of the results that could arise, so as to allow them to make informed choices over whether to take the test and which results they wish to receive. Recommendations are also provided for WGS/WES in the pediatric context, and for when results implicate patients' family members.
CONCLUSION: These recommendations are only a proposal to be developed into comprehensive Canadian-based guidelines. They aim to promote discussion about the reporting of WGS/WES results, and to encourage the ethical implementation of these new technologies in the clinical setting.

Entities:  

Keywords:  Canadian Healthcare System; Practice Guidelines; Professional Responsibility; Return of Results; Whole-Genome Sequencing

Mesh:

Year:  2013        PMID: 24078715     DOI: 10.1136/jmedgenet-2013-101934

Source DB:  PubMed          Journal:  J Med Genet        ISSN: 0022-2593            Impact factor:   6.318


  12 in total

1.  Whole Genome Sequencing as a Genetic Test for Autism Spectrum Disorder: From Bench to Bedside and then Back Again.

Authors:  Michael J Szego; Ma'n H Zawati
Journal:  J Can Acad Child Adolesc Psychiatry       Date:  2016-05-01

2.  Canadian Research Ethics Board Leadership Attitudes to the Return of Genetic Research Results to Individuals and Their Families.

Authors:  Conrad V Fernandez; P Pearl O'Rourke; Laura M Beskow
Journal:  J Law Med Ethics       Date:  2015       Impact factor: 1.718

Review 3.  Next-Generation Sequencing and the Return of Results.

Authors:  Bartha Maria Knoppers; Minh Thu Nguyen; Karine Sénécal; Anne Marie Tassé; Ma'n H Zawati
Journal:  Cold Spring Harb Perspect Med       Date:  2016-10-03       Impact factor: 6.915

4.  Clinical Genetic Screening in Adult Patients with Kidney Disease.

Authors:  Enrico Cocchi; Jordan Gabriela Nestor; Ali G Gharavi
Journal:  Clin J Am Soc Nephrol       Date:  2020-07-09       Impact factor: 8.237

5.  Practices and views of neurologists regarding the use of whole-genome sequencing in clinical settings: a web-based survey.

Authors:  Iris Jaitovich Groisman; Thierry Hurlimann; Amir Shoham; Béatrice Godard
Journal:  Eur J Hum Genet       Date:  2017-05-10       Impact factor: 4.246

6.  WHATIF: An open-source desktop application for extraction and management of the incidental findings from next-generation sequencing variant data.

Authors:  Zhan Ye; Christopher Kadolph; Robert Strenn; Daniel Wall; Elizabeth McPherson; Simon Lin
Journal:  Comput Biol Med       Date:  2015-04-08       Impact factor: 4.589

Review 7.  Towards precision nephrology: the opportunities and challenges of genomic medicine.

Authors:  Jordan G Nestor; Emily E Groopman; Ali G Gharavi
Journal:  J Nephrol       Date:  2017-10-17       Impact factor: 3.902

8.  The clinical application of genome-wide sequencing for monogenic diseases in Canada: Position Statement of the Canadian College of Medical Geneticists.

Authors:  Kym Boycott; Taila Hartley; Shelin Adam; Francois Bernier; Karen Chong; Bridget A Fernandez; Jan M Friedman; Michael T Geraghty; Stacey Hume; Bartha M Knoppers; Anne-Marie Laberge; Jacek Majewski; Roberto Mendoza-Londono; M Stephen Meyn; Jacques L Michaud; Tanya N Nelson; Julie Richer; Bekim Sadikovic; David L Skidmore; Tracy Stockley; Sherry Taylor; Clara van Karnebeek; Ma'n H Zawati; Julie Lauzon; Christine M Armour
Journal:  J Med Genet       Date:  2015-05-07       Impact factor: 6.318

9.  An implementation framework for the feedback of individual research results and incidental findings in research.

Authors:  Adrian Thorogood; Yann Joly; Bartha Maria Knoppers; Tommy Nilsson; Peter Metrakos; Anthoula Lazaris; Ayat Salman
Journal:  BMC Med Ethics       Date:  2014-12-23       Impact factor: 2.652

Review 10.  Ethics education for clinician-researchers in genetics: The combined approach.

Authors:  Ma'n Zawati; Eliza Cohen; David Parry; Denise Avard; David Syncox
Journal:  Appl Transl Genom       Date:  2014-12-16
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