Literature DB >> 24076358

Ten years of dengue drug discovery: progress and prospects.

Siew Pheng Lim1, Qing-Yin Wang, Christian G Noble, Yen-Liang Chen, Hongping Dong, Bin Zou, Fumiaki Yokokawa, Shahul Nilar, Paul Smith, David Beer, Julien Lescar, Pei-Yong Shi.   

Abstract

To combat neglected diseases, the Novartis Institute of Tropical Diseases (NITD) was founded in 2002 through private-public funding from Novartis and the Singapore Economic Development Board. One of NITD's missions is to develop antivirals for dengue virus (DENV), the most prevalent mosquito-borne viral pathogen. Neither vaccine nor antiviral is currently available for DENV. Here we review the progress in dengue drug discovery made at NITD as well as the major discoveries made by academia and other companies. Four strategies have been pursued to identify inhibitors of DENV through targeting both viral and host proteins: (i) HTS (high-throughput screening) using virus replication assays; (ii) HTS using viral enzyme assays; (iii) structure-based in silico docking and rational design; (iv) repurposing hepatitis C virus inhibitors for DENV. Along the developmental process from hit finding to clinical candidate, many inhibitors did not advance beyond the stage of hit-to-lead optimization, due to their poor selectivity, physiochemical or pharmacokinetic properties. Only a few compounds showed efficacy in the AG129 DENV mouse model. Two nucleoside analogs, NITD-008 and Balapiravir, entered preclinical animal safety study and clinic trial, but both were terminated due to toxicity and lack of potency, respectively. Celgosivir, a host alpha-glucosidase inhibitor, is currently under clinical trial; its clinical efficacy remains to be determined. The knowledge accumulated during the past decade has provided a better rationale for ongoing dengue drug discovery. Though challenging, we are optimistic that this continuous, concerted effort will lead to an effective dengue therapy.
Copyright © 2013 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Antiviral; DAA; DENV; DHF/DSS; Dengue virus; Drug discovery; ER; FP; Flavivirus; HBV; HCV; HIV; HTS; MTase; NI; NNI; PI; PoC; RNA-dependent RNA polymerase; RdRp; SAR; SPA; TBEV; TI; VSV; WEEV; WNV; West Nile virus; Western equine encephalitis virus; YFV; dengue hemorrhagic fever/dengue shock syndrome; dengue virus; direct antiviral agent; endoplasmic reticulum; fluorescence polarization; hepatitis B virus; hepatitis C virus; high-throughput screening; human immunodeficiency virus; methyltransferase; non-nucleoside inhibitor; nucleoside analog inhibitors; proof-of-concept; protease inhibitors; scintillation proximity assay; structure–activity relationship; therapeutic index; tick-borne encephalitis virus; vesicular stomatitis virus; yellow fever virus

Mesh:

Substances:

Year:  2013        PMID: 24076358     DOI: 10.1016/j.antiviral.2013.09.013

Source DB:  PubMed          Journal:  Antiviral Res        ISSN: 0166-3542            Impact factor:   5.970


  113 in total

1.  An inducible heat shock protein 70 small molecule inhibitor demonstrates anti-dengue virus activity, validating Hsp70 as a host antiviral target.

Authors:  Matthew K Howe; Brittany L Speer; Philip F Hughes; David R Loiselle; Subhash Vasudevan; Timothy A J Haystead
Journal:  Antiviral Res       Date:  2016-04-04       Impact factor: 5.970

2.  Structure-Activity Relationship Study of QL47: A Broad-Spectrum Antiviral Agent.

Authors:  Yanke Liang; Melissanne de Wispelaere; Margot Carocci; Qingsong Liu; Jinhua Wang; Priscilla L Yang; Nathanael S Gray
Journal:  ACS Med Chem Lett       Date:  2017-02-03       Impact factor: 4.345

3.  Viral Replication Inhibitors May Treat the Dengue Virus Infections.

Authors:  Ahmed F Abdel-Magid
Journal:  ACS Med Chem Lett       Date:  2016-12-29       Impact factor: 4.345

4.  A cocrystal structure of dengue capsid protein in complex of inhibitor.

Authors:  Hongjie Xia; Xuping Xie; Jing Zou; Christian G Noble; William K Russell; Luis Marcelo F Holthauzen; Kyung H Choi; Mark A White; Pei-Yong Shi
Journal:  Proc Natl Acad Sci U S A       Date:  2020-07-15       Impact factor: 11.205

5.  A Cyclic Phosphoramidate Prodrug of 2'-Deoxy-2'-Fluoro-2'-C-Methylguanosine for the Treatment of Dengue Virus Infection.

Authors:  Ratna Karuna; Fumiaki Yokokawa; Keshi Wang; Jin Zhang; Haoying Xu; Gang Wang; Mei Ding; Wai Ling Chan; Nahdiyah Abdul Ghafar; Andrea Leonardi; Cheah Chen Seh; Peck Gee Seah; Wei Liu; Rao P S Srinivasa; Siew Pheng Lim; Suresh B Lakshminarayana; Ellie Growcott; Sreehari Babu; Martijn Fenaux; Weidong Zhong; Feng Gu; Pei-Yong Shi; Francesca Blasco; Yen-Liang Chen
Journal:  Antimicrob Agents Chemother       Date:  2020-11-17       Impact factor: 5.191

Review 6.  Therapeutic Potential of Spirooxindoles as Antiviral Agents.

Authors:  Na Ye; Haiying Chen; Eric A Wold; Pei-Yong Shi; Jia Zhou
Journal:  ACS Infect Dis       Date:  2016-05-05       Impact factor: 5.084

Review 7.  Fluorescence anisotropy (polarization): from drug screening to precision medicine.

Authors:  Hairong Zhang; Qian Wu; Mikhail Y Berezin
Journal:  Expert Opin Drug Discov       Date:  2015-08-03       Impact factor: 6.098

8.  Molecular basis for specific viral RNA recognition and 2'-O-ribose methylation by the dengue virus nonstructural protein 5 (NS5).

Authors:  Yongqian Zhao; Tingjin Sherryl Soh; Siew Pheng Lim; Ka Yan Chung; Kunchithapadam Swaminathan; Subhash G Vasudevan; Pei-Yong Shi; Julien Lescar; Dahai Luo
Journal:  Proc Natl Acad Sci U S A       Date:  2015-11-17       Impact factor: 11.205

9.  Identification of a Pyridoxine-Derived Small-Molecule Inhibitor Targeting Dengue Virus RNA-Dependent RNA Polymerase.

Authors:  Hong-Tao Xu; Susan P Colby-Germinario; Said Hassounah; Peter K Quashie; Yingshan Han; Maureen Oliveira; Brent R Stranix; Mark A Wainberg
Journal:  Antimicrob Agents Chemother       Date:  2015-11-16       Impact factor: 5.191

Review 10.  Zika virus: An emergent neuropathological agent.

Authors:  Martyn K White; Hassen S Wollebo; J David Beckham; Kenneth L Tyler; Kamel Khalili
Journal:  Ann Neurol       Date:  2016-08-10       Impact factor: 10.422

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