Literature DB >> 24076190

Time to be versatile: regulation of the replication timing program in budding yeast.

Kazumasa Yoshida1, Ana Poveda, Philippe Pasero.   

Abstract

Eukaryotic replication origins are activated at different times during the S phase of the cell cycle, following a temporal program that is stably transmitted to daughter cells. Although the mechanisms that control initiation at the level of individual origins are now well understood, much less is known on how cells coordinate replication at hundreds of origins distributed on the chromosomes. In this review, we discuss recent advances shedding new light on how this complex process is regulated in the budding yeast Saccharomyces cerevisiae. The picture that emerges from these studies is that replication timing is regulated in cis by mechanisms modulating the chromatin structure and the subnuclear organization of origins. These mechanisms do not affect the licensing of replication origins but determine their ability to compete for limiting initiation factors, which are recycled from early to late origins throughout the length of the S phase.
© 2013.

Entities:  

Keywords:  2D; ACS; ARS; ARS consensus sequence; BrdU; HDAC; ORC; SIR; autonomously replicating sequence; bromodeoxyuridine; checkpoints; histone deacetylase; histone deacetylases; initiation of DNA replication; origin recognition complex; pre-RC; pre-replication complex; replication foci; silent information regulator; two-dimensional

Mesh:

Year:  2013        PMID: 24076190     DOI: 10.1016/j.jmb.2013.09.020

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  13 in total

1.  Rif1 binds to G quadruplexes and suppresses replication over long distances.

Authors:  Yutaka Kanoh; Seiji Matsumoto; Rino Fukatsu; Naoko Kakusho; Nobuaki Kono; Claire Renard-Guillet; Koji Masuda; Keisuke Iida; Kazuo Nagasawa; Katsuhiko Shirahige; Hisao Masai
Journal:  Nat Struct Mol Biol       Date:  2015-10-05       Impact factor: 15.369

Review 2.  DNA replication origin activation in space and time.

Authors:  Michalis Fragkos; Olivier Ganier; Philippe Coulombe; Marcel Méchali
Journal:  Nat Rev Mol Cell Biol       Date:  2015-06       Impact factor: 94.444

3.  Checkpoint-Independent Regulation of Origin Firing by Mrc1 through Interaction with Hsk1 Kinase.

Authors:  Seiji Matsumoto; Yutaka Kanoh; Michie Shimmoto; Motoshi Hayano; Kyosuke Ueda; Rino Fukatsu; Naoko Kakusho; Hisao Masai
Journal:  Mol Cell Biol       Date:  2017-03-17       Impact factor: 4.272

Review 4.  How and why multiple MCMs are loaded at origins of DNA replication.

Authors:  Shankar P Das; Nicholas Rhind
Journal:  Bioessays       Date:  2016-05-13       Impact factor: 4.345

Review 5.  Evolutionary conservation of the CDK targets in eukaryotic DNA replication initiation.

Authors:  Philip Zegerman
Journal:  Chromosoma       Date:  2015-01-11       Impact factor: 4.316

6.  Dbf4 recruitment by forkhead transcription factors defines an upstream rate-limiting step in determining origin firing timing.

Authors:  Dingqiang Fang; Armelle Lengronne; Di Shi; Romain Forey; Magdalena Skrzypczak; Krzysztof Ginalski; Changhui Yan; Xiaoke Wang; Qinhong Cao; Philippe Pasero; Huiqiang Lou
Journal:  Genes Dev       Date:  2018-01-12       Impact factor: 11.361

7.  Protein phosphatase 1 recruitment by Rif1 regulates DNA replication origin firing by counteracting DDK activity.

Authors:  Anoushka Davé; Carol Cooley; Mansi Garg; Alessandro Bianchi
Journal:  Cell Rep       Date:  2014-03-20       Impact factor: 9.423

8.  Identification of Multiple Proteins Coupling Transcriptional Gene Silencing to Genome Stability in Arabidopsis thaliana.

Authors:  Christopher J Hale; Magdalena E Potok; Jennifer Lopez; Truman Do; Ao Liu; Javier Gallego-Bartolome; Scott D Michaels; Steven E Jacobsen
Journal:  PLoS Genet       Date:  2016-06-02       Impact factor: 5.917

9.  Context based computational analysis and characterization of ARS consensus sequences (ACS) of Saccharomyces cerevisiae genome.

Authors:  Vinod Kumar Singh; Annangarachari Krishnamachari
Journal:  Genom Data       Date:  2016-07-19

Review 10.  A journey through the microscopic ages of DNA replication.

Authors:  Marius Reinhart; M Cristina Cardoso
Journal:  Protoplasma       Date:  2016-12-09       Impact factor: 3.356

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.