Literature DB >> 24071830

Investigation of solute-solvent interactions in phenol compounds: accurate ab initio calculations of solvent effects on 1H NMR chemical shifts.

Michael G Siskos1, Vassiliki G Kontogianni, Constantinos G Tsiafoulis, Andreas G Tzakos, Ioannis P Gerothanassis.   

Abstract

Accurate (1)H chemical shifts of the -OH groups of polyphenol compounds can be calculated, compared to experimental values, using a combination of DFT, polarizable continuum model (PCM) and discrete solute-solvent hydrogen bond interactions. The study focuses on three molecular solutes: phenol, 4-methylcatechol and the natural product genkwanin in DMSO, acetone, acetonitrile, and chloroform. Excellent linear correlation between experimental and computed chemical shifts (with the GIAO method at the DFT/B3LYP/6-311++G(2d,p) level) was obtained with minimization of the solvation complexes at the DFT/B3LYP/6-31+G(d) and DFT/B3LYP/6-311++G(d,p) level of theory with a correlation coefficient of 0.991. The use of the DFT/B3LYP/6-31+G(d) level of theory for minimization could provide an excellent means for the accurate prediction of the experimental OH chemical shift range of over 8 ppm due to: (i) strong intramolecular and solute-solvent intermolecular hydrogen bonds, (ii) flip-flop intramolecular hydrogen bonds, and (iii) conformational effects of substituents of genkwanin. The combined use of ab initio calculations and experimental (1)H chemical shifts of phenol -OH groups provides a method of primary interest in order to obtain detailed structural, conformation and electronic description of solute-solvent interactions at a molecular level.

Entities:  

Year:  2013        PMID: 24071830     DOI: 10.1039/c3ob41556b

Source DB:  PubMed          Journal:  Org Biomol Chem        ISSN: 1477-0520            Impact factor:   3.876


  9 in total

Review 1.  High Resolution NMR Spectroscopy as a Structural and Analytical Tool for Unsaturated Lipids in Solution.

Authors:  Eleni Alexandri; Raheel Ahmed; Hina Siddiqui; Muhammad I Choudhary; Constantinos G Tsiafoulis; Ioannis P Gerothanassis
Journal:  Molecules       Date:  2017-10-05       Impact factor: 4.411

Review 2.  Hydrogen Atomic Positions of O-H···O Hydrogen Bonds in Solution and in the Solid State: The Synergy of Quantum Chemical Calculations with ¹H-NMR Chemical Shifts and X-ray Diffraction Methods.

Authors:  Michael G Siskos; M Iqbal Choudhary; Ioannis P Gerothanassis
Journal:  Molecules       Date:  2017-03-07       Impact factor: 4.411

Review 3.  NMR and IR Investigations of Strong Intramolecular Hydrogen Bonds.

Authors:  Poul Erik Hansen; Jens Spanget-Larsen
Journal:  Molecules       Date:  2017-03-29       Impact factor: 4.411

4.  p-Pyridinyl oxime carbamates: synthesis, DNA binding, DNA photocleaving activity and theoretical photodegradation studies.

Authors:  Panagiotis S Gritzapis; Panayiotis C Varras; Nikolaos-Panagiotis Andreou; Katerina R Katsani; Konstantinos Dafnopoulos; George Psomas; Zisis V Peitsinis; Alexandros E Koumbis; Konstantina C Fylaktakidou
Journal:  Beilstein J Org Chem       Date:  2020-03-09       Impact factor: 2.883

Review 5.  Analytical and Structural Tools of Lipid Hydroperoxides: Present State and Future Perspectives.

Authors:  Vassiliki G Kontogianni; Ioannis P Gerothanassis
Journal:  Molecules       Date:  2022-03-25       Impact factor: 4.411

6.  Study of the Addition Mechanism of 1H-Indazole and Its 4-, 5-, 6-, and 7-Nitro Derivatives to Formaldehyde in Aqueous Hydrochloric Acid Solutions.

Authors:  Ibon Alkorta; Rosa M Claramunt; José Elguero; Enrique Gutiérrez-Puebla; M Ángeles Monge; Felipe Reviriego; Christian Roussel
Journal:  J Org Chem       Date:  2022-04-11       Impact factor: 4.198

7.  Assessment of Bioactivity-Modulating Pseudo-Ring Formation in Psilocin and Related Tryptamines.

Authors:  Claudius Lenz; Sebastian Dörner; Felix Trottmann; Christian Hertweck; Alexander Sherwood; Dirk Hoffmeister
Journal:  Chembiochem       Date:  2022-05-18       Impact factor: 3.461

8.  DFT Calculations of 1H- and 13C-NMR Chemical Shifts of Geometric Isomers of Conjugated Linoleic Acid (18:2 ω-7) and Model Compounds in Solution.

Authors:  Themistoklis Venianakis; Christina Oikonomaki; Michael G Siskos; Panayiotis C Varras; Alexandra Primikyri; Eleni Alexandri; Ioannis P Gerothanassis
Journal:  Molecules       Date:  2020-08-11       Impact factor: 4.411

9.  NMR and Computational Studies as Analytical and High-Resolution Structural Tool for Complex Hydroperoxides and Diastereomeric Endo-Hydroperoxides of Fatty Acids in Solution-Exemplified by Methyl Linolenate.

Authors:  Raheel Ahmed; Panayiotis C Varras; Michael G Siskos; Hina Siddiqui; M Iqbal Choudhary; Ioannis P Gerothanassis
Journal:  Molecules       Date:  2020-10-23       Impact factor: 4.411

  9 in total

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