Literature DB >> 24066613

Biochar and microbial signaling: production conditions determine effects on microbial communication.

Caroline A Masiello1, Ye Chen, Xiaodong Gao, Shirley Liu, Hsiao-Ying Cheng, Matthew R Bennett, Jennifer A Rudgers, Daniel S Wagner, Kyriacos Zygourakis, Jonathan J Silberg.   

Abstract

Charcoal has a long soil residence time, which has resulted in its production and use as a carbon sequestration technique (biochar). A range of biological effects can be triggered by soil biochar that can positively and negatively influence carbon storage, such as changing the decomposition rate of organic matter and altering plant biomass production. Sorption of cellular signals has been hypothesized to underlie some of these effects, but it remains unknown whether the binding of biochemical signals occurs, and if so, on time scales relevant to microbial growth and communication. We examined biochar sorption of N-3-oxo-dodecanoyl-L-homoserine lactone, an acyl-homoserine lactone (AHL) intercellular signaling molecule used by many gram-negative soil microbes to regulate gene expression. We show that wood biochars disrupt communication within a growing multicellular system that is made up of sender cells that synthesize AHL and receiver cells that express green fluorescent protein in response to an AHL signal. However, biochar inhibition of AHL-mediated cell-cell communication varied, with the biochar prepared at 700 °C (surface area of 301 m(2)/g) inhibiting cellular communication 10-fold more than an equivalent mass of biochar prepared at 300 °C (surface area of 3 m(2)/g). These findings provide the first direct evidence that biochars elicit a range of effects on gene expression dependent on intercellular signaling, implicating the method of biochar preparation as a parameter that could be tuned to regulate microbial-dependent soil processes, like nitrogen fixation and pest attack of root crops.

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Year:  2013        PMID: 24066613      PMCID: PMC3897159          DOI: 10.1021/es401458s

Source DB:  PubMed          Journal:  Environ Sci Technol        ISSN: 0013-936X            Impact factor:   9.028


  32 in total

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Journal:  Trends Microbiol       Date:  2000-07       Impact factor: 17.079

2.  Induction of systemic resistance in plants by biochar, a soil-applied carbon sequestering agent.

Authors:  Yigal Elad; Dalia Rav David; Yael Meller Harel; Menahem Borenshtein; Hananel Ben Kalifa; Avner Silber; Ellen R Graber
Journal:  Phytopathology       Date:  2010-09       Impact factor: 4.025

Review 3.  Foundations for the design and implementation of synthetic genetic circuits.

Authors:  Adrian L Slusarczyk; Allen Lin; Ron Weiss
Journal:  Nat Rev Genet       Date:  2012-05-18       Impact factor: 53.242

4.  Bacterial quorum sensing and nitrogen cycling in rhizosphere soil.

Authors:  Kristen M DeAngelis; Steven E Lindow; Mary K Firestone
Journal:  FEMS Microbiol Ecol       Date:  2008-08-20       Impact factor: 4.194

5.  Chemical and structural analysis of enhanced biochars: thermally treated mixtures of biochar, chicken litter, clay and minerals.

Authors:  Y Lin; P Munroe; S Joseph; A Ziolkowski; L van Zwieten; S Kimber; J Rust
Journal:  Chemosphere       Date:  2012-12-25       Impact factor: 7.086

6.  Expression of Pseudomonas aeruginosa virulence genes requires cell-to-cell communication.

Authors:  L Passador; J M Cook; M J Gambello; L Rust; B H Iglewski
Journal:  Science       Date:  1993-05-21       Impact factor: 47.728

7.  Structure of the autoinducer required for expression of Pseudomonas aeruginosa virulence genes.

Authors:  J P Pearson; K M Gray; L Passador; K D Tucker; A Eberhard; B H Iglewski; E P Greenberg
Journal:  Proc Natl Acad Sci U S A       Date:  1994-01-04       Impact factor: 11.205

8.  Impacts of woodchip biochar additions on greenhouse gas production and sorption/degradation of two herbicides in a Minnesota soil.

Authors:  K A Spokas; W C Koskinen; J M Baker; D C Reicosky
Journal:  Chemosphere       Date:  2009-07-31       Impact factor: 7.086

9.  Black carbon in deep-Sea sediments

Authors: 
Journal:  Science       Date:  1998-06-19       Impact factor: 47.728

10.  AiiA, an enzyme that inactivates the acylhomoserine lactone quorum-sensing signal and attenuates the virulence of Erwinia carotovora.

Authors:  Y H Dong; J L Xu; X Z Li; L H Zhang
Journal:  Proc Natl Acad Sci U S A       Date:  2000-03-28       Impact factor: 11.205

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  13 in total

1.  Bistability and oscillations in co-repressive synthetic microbial consortia.

Authors:  Mehdi Sadeghpour; Alan Veliz-Cuba; Gábor Orosz; Krešimir Josić; Matthew R Bennett
Journal:  Quant Biol       Date:  2017-03-30

2.  Weathering of pyrogenic organic matter induces fungal oxidative enzyme response in single culture inoculation experiments.

Authors:  Christy Gibson; Timothy D Berry; Ruzhen Wang; Julie A Spencer; Cliff T Johnston; Yong Jiang; Jeffrey A Bird; Timothy R Filley
Journal:  Org Geochem       Date:  2015-12-12       Impact factor: 3.607

3.  Agriculture: State-of-the-art soil.

Authors:  Rachel Cernansky
Journal:  Nature       Date:  2015-01-15       Impact factor: 49.962

4.  Dynamics of microbial community composition and soil organic carbon mineralization in soil following addition of pyrogenic and fresh organic matter.

Authors:  Thea Whitman; Charles Pepe-Ranney; Akio Enders; Chantal Koechli; Ashley Campbell; Daniel H Buckley; Johannes Lehmann
Journal:  ISME J       Date:  2016-04-29       Impact factor: 10.302

5.  Signal Destruction Tunes the Zone of Activation in Spatially Distributed Signaling Networks.

Authors:  Kalinga Pavan Silva; Prithiviraj Chellamuthu; James Q Boedicker
Journal:  Biophys J       Date:  2017-03-14       Impact factor: 4.033

6.  Role of biochar, compost and plant growth promoting rhizobacteria in the management of tomato early blight disease.

Authors:  Mujahid Rasool; Adnan Akhter; Gerhard Soja; Muhammad Saleem Haider
Journal:  Sci Rep       Date:  2021-03-17       Impact factor: 4.379

Review 7.  Bioengineered biochar as smart candidate for resource recovery toward circular bio-economy: a review.

Authors:  Hong Liu; Vinay Kumar; Vivek Yadav; Shasha Guo; Surendra Sarsaiya; Parameswaran Binod; Raveendran Sindhu; Ping Xu; Zengqiang Zhang; Ashok Pandey; Mukesh Kumar Awasthi
Journal:  Bioengineered       Date:  2021-12       Impact factor: 3.269

8.  Non-chemical Control of Root Parasitic Weeds with Biochar.

Authors:  Hanan Eizenberg; Dina Plakhine; Hammam Ziadne; Ludmila Tsechansky; Ellen R Graber
Journal:  Front Plant Sci       Date:  2017-06-07       Impact factor: 5.753

Review 9.  Translating New Synthetic Biology Advances for Biosensing Into the Earth and Environmental Sciences.

Authors:  Ilenne Del Valle; Emily M Fulk; Prashant Kalvapalle; Jonathan J Silberg; Caroline A Masiello; Lauren B Stadler
Journal:  Front Microbiol       Date:  2021-02-04       Impact factor: 5.640

10.  Charcoal Disrupts Soil Microbial Communication through a Combination of Signal Sorption and Hydrolysis.

Authors:  Xiaodong Gao; Hsiao-Ying Cheng; Ilenne Del Valle; Shirley Liu; Caroline A Masiello; Jonathan J Silberg
Journal:  ACS Omega       Date:  2016-08-23
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