Literature DB >> 24065773

Nonlabens antarcticus sp. nov., a psychrophilic bacterium isolated from glacier ice, and emended descriptions of Nonlabens marinus Park et al. 2012 and Nonlabens agnitus Yi and Chun 2012.

Yong Min Kwon1, Sung-Hyun Yang1, Kae Kyoung Kwon2,1, Sang-Jin Kim2,1.   

Abstract

A Gram-negative, proteorhodopsin-containing, orange pigmented, rod-shaped and strictly aerobic bacterium, designated strain AKS622(T), was isolated from a glacier core collected from the coast of King George Island, Antarctica. 16S rRNA gene sequence analysis revealed that strain AKS622(T) was affiliated to the genus Nonlabens of the family Flavobacteriaceae and showed highest similarity to Nonlabens marinus S1-08(T) (97.9%). The level of DNA-DNA relatedness between strain AKS622(T) and N. marinus S1-08(T) was 46%. Optimal growth of strain AKS622(T) was observed at pH 7.0, at 15 °C and with 2.0% NaCl. The predominant cellular fatty acids were anteiso-C(15 : 0), iso-C(16 : 0), iso-C(16 : 0) 3-OH, C17:0 2-OH and summed feature 3 (comprising C(16 : 1)ω7c and/or C(16 : 1)ω6c). The DNA G+C content was 37.9 mol%. The major respiratory quinone was MK-6. Phosphatidylethanolamine, four unidentified glycolipids, three unidentified aminolipids and one unidentified lipid were detected as major polar lipids. On the basis of the data from this polyphasic taxonomic study, it was concluded that strain AKS622(T) represents a novel species within the genus Nonlabens, for which the name Nonlabens antarcticus sp. nov. is proposed. The type strain is AKS622(T) ( = KCCM 43019(T) = JCM 14068(T)). Emended descriptions of N. marinus Park et al. 2012 and Nonlabens agnitus Yi and Chun 2012 are given.

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Year:  2013        PMID: 24065773     DOI: 10.1099/ijs.0.056606-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  7 in total

1.  Analysis of 1,000 Type-Strain Genomes Improves Taxonomic Classification of Bacteroidetes.

Authors:  Marina García-López; Jan P Meier-Kolthoff; Brian J Tindall; Sabine Gronow; Tanja Woyke; Nikos C Kyrpides; Richard L Hahnke; Markus Göker
Journal:  Front Microbiol       Date:  2019-09-23       Impact factor: 5.640

2.  Aggregatimonas sangjinii gen. nov., sp. nov., a novel silver nanoparticle synthesizing bacterium belonging to the family Flavobacteriaceae.

Authors:  Dawoon Chung; Jaejoon Jung; Jaoon Young Hwan Kim; Kyung Woo Kim; Yong Min Kwon
Journal:  Antonie Van Leeuwenhoek       Date:  2022-01-23       Impact factor: 2.271

3.  Draft Genome Sequences of Marine Flavobacterium Nonlabens Strains NR17, NR24, NR27, NR32, NR33, and Ara13.

Authors:  Masato Nakanishi; Pedro Meirelles; Ryohei Suzuki; Naoki Takatani; Sayaka Mino; Wataru Suda; Kenshiro Oshima; Masahira Hattori; Moriya Ohkuma; Masashi Hosokawa; Kazuo Miyashita; Fabiano L Thompson; Ako Niwa; Toko Sawabe; Tomoo Sawabe
Journal:  Genome Announc       Date:  2014-11-13

4.  Genome-Based Taxonomic Classification of Bacteroidetes.

Authors:  Richard L Hahnke; Jan P Meier-Kolthoff; Marina García-López; Supratim Mukherjee; Marcel Huntemann; Natalia N Ivanova; Tanja Woyke; Nikos C Kyrpides; Hans-Peter Klenk; Markus Göker
Journal:  Front Microbiol       Date:  2016-12-20       Impact factor: 5.640

5.  Complete genome sequence of Lutibacter profundi LP1T isolated from an Arctic deep-sea hydrothermal vent system.

Authors:  Juliane Wissuwa; Sven Le Moine Bauer; Ida Helene Steen; Runar Stokke
Journal:  Stand Genomic Sci       Date:  2017-01-07

6.  Production of extracellular vesicles with light-induced proton pump activity by proteorhodopsin-containing marine bacteria.

Authors:  Yong Min Kwon; Ajit Kumar Patra; Hiroshi Xavier Chiura; Sang-Jin Kim
Journal:  Microbiologyopen       Date:  2019-02-22       Impact factor: 3.139

7.  Diversity and functional analysis of light-driven pumping rhodopsins in marine Flavobacteria.

Authors:  Yong Min Kwon; So-Young Kim; Kwang-Hwan Jung; Sang-Jin Kim
Journal:  Microbiologyopen       Date:  2015-12-13       Impact factor: 3.139

  7 in total

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