Literature DB >> 24057361

Arabidopsis database and stock resources.

Donghui Li1, Kate Dreher, Emma Knee, Jelena Brkljacic, Erich Grotewold, Tanya Z Berardini, Philippe Lamesch, Margarita Garcia-Hernandez, Leonore Reiser, Eva Huala.   

Abstract

The volume of Arabidopsis information has increased enormously in recent years as a result of the sequencing of the reference genome and other large-scale functional genomics projects. Much of the data is stored in public databases, where data are organized, analyzed, and made freely accessible to the research community. These databases are resources that researchers can utilize for making predictions and developing testable hypotheses. The methods in this chapter describe ways to access and utilize Arabidopsis data and genomic resources found in databases and stock centers.

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Year:  2014        PMID: 24057361     DOI: 10.1007/978-1-62703-580-4_4

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  5 in total

1.  Agrobacterium-mediated plant transformation: biology and applications.

Authors:  Hau-Hsuan Hwang; Manda Yu; Erh-Min Lai
Journal:  Arabidopsis Book       Date:  2017-10-20

2.  An assessment of heavy ion irradiation mutagenesis for reverse genetics in wheat (Triticum aestivum L.).

Authors:  Timothy L Fitzgerald; Jonathan J Powell; Jiri Stiller; Terri L Weese; Tomoko Abe; Guangyao Zhao; Jizeng Jia; C Lynne McIntyre; Zhongyi Li; John M Manners; Kemal Kazan
Journal:  PLoS One       Date:  2015-02-26       Impact factor: 3.240

3.  Sustainable funding for biocuration: The Arabidopsis Information Resource (TAIR) as a case study of a subscription-based funding model.

Authors:  Leonore Reiser; Tanya Z Berardini; Donghui Li; Robert Muller; Emily M Strait; Qian Li; Yarik Mezheritsky; Andrey Vetushko; Eva Huala
Journal:  Database (Oxford)       Date:  2016-03-17       Impact factor: 3.451

4.  Enhancing the GABI-Kat Arabidopsis thaliana T-DNA Insertion Mutant Database by Incorporating Araport11 Annotation.

Authors:  Nils Kleinboelting; Gunnar Huep; Bernd Weisshaar
Journal:  Plant Cell Physiol       Date:  2017-01-01       Impact factor: 4.927

5.  Combining a Simple Method for DNA/RNA/Protein Co-Purification and Arabidopsis Protoplast Assay to Facilitate Viroid Research.

Authors:  Jian Jiang; Junfei Ma; Bin Liu; Ying Wang
Journal:  Viruses       Date:  2019-04-03       Impact factor: 5.048

  5 in total

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