Literature DB >> 24052622

Acquired mutations that affect pre-mRNA splicing in hematologic malignancies and solid tumors.

Linda M Scott1, Vivienne I Rebel.   

Abstract

The application of next-generation sequencing technologies to interrogate the genome of human hematologic malignancies is providing promising insights into their molecular etiology and into the pathogenesis of seemingly unrelated malignancies. Among the somatic mutations identified by this approach are ones that target components of the spliceosome, a ribonucleoprotein complex responsible for the posttranscriptional processing of primary transcripts to form mature messenger RNA species. These mutations were initially detected in patients with chronic lymphocytic leukemia or a myelodysplastic syndrome, but can also occur at relatively high frequency in some solid tumors, including uveal malignant melanoma, adenocarcinoma of the lung, and estrogen receptor-positive breast cancers. Their presence in a variety of malignancies suggests that the spliceosomal mutations may play a fundamental role in defining the malignant phenotype. The development and testing of drugs that eliminate cells bearing a spliceosomal mutation, or normalize their altered transcript splicing patterns, are therefore a priority. Here, we summarize the effects of spliceosome-associated mutations on transcript processing in vitro and in vivo, and their impact on disease initiation and/or progression and patient outcome. Moreover, we discuss the therapeutic potential of compounds already known to target splicing factor 3B subunit 1 (SF3B1), an essential component of the spliceosome that is frequently mutated.

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Year:  2013        PMID: 24052622     DOI: 10.1093/jnci/djt257

Source DB:  PubMed          Journal:  J Natl Cancer Inst        ISSN: 0027-8874            Impact factor:   13.506


  36 in total

1.  Genomic analyses identify molecular subtypes of pancreatic cancer.

Authors:  Peter Bailey; David K Chang; Katia Nones; Amber L Johns; Ann-Marie Patch; Marie-Claude Gingras; David K Miller; Angelika N Christ; Tim J C Bruxner; Michael C Quinn; Craig Nourse; L Charles Murtaugh; Ivon Harliwong; Senel Idrisoglu; Suzanne Manning; Ehsan Nourbakhsh; Shivangi Wani; Lynn Fink; Oliver Holmes; Venessa Chin; Matthew J Anderson; Stephen Kazakoff; Conrad Leonard; Felicity Newell; Nick Waddell; Scott Wood; Qinying Xu; Peter J Wilson; Nicole Cloonan; Karin S Kassahn; Darrin Taylor; Kelly Quek; Alan Robertson; Lorena Pantano; Laura Mincarelli; Luis N Sanchez; Lisa Evers; Jianmin Wu; Mark Pinese; Mark J Cowley; Marc D Jones; Emily K Colvin; Adnan M Nagrial; Emily S Humphrey; Lorraine A Chantrill; Amanda Mawson; Jeremy Humphris; Angela Chou; Marina Pajic; Christopher J Scarlett; Andreia V Pinho; Marc Giry-Laterriere; Ilse Rooman; Jaswinder S Samra; James G Kench; Jessica A Lovell; Neil D Merrett; Christopher W Toon; Krishna Epari; Nam Q Nguyen; Andrew Barbour; Nikolajs Zeps; Kim Moran-Jones; Nigel B Jamieson; Janet S Graham; Fraser Duthie; Karin Oien; Jane Hair; Robert Grützmann; Anirban Maitra; Christine A Iacobuzio-Donahue; Christopher L Wolfgang; Richard A Morgan; Rita T Lawlor; Vincenzo Corbo; Claudio Bassi; Borislav Rusev; Paola Capelli; Roberto Salvia; Giampaolo Tortora; Debabrata Mukhopadhyay; Gloria M Petersen; Donna M Munzy; William E Fisher; Saadia A Karim; James R Eshleman; Ralph H Hruban; Christian Pilarsky; Jennifer P Morton; Owen J Sansom; Aldo Scarpa; Elizabeth A Musgrove; Ulla-Maja Hagbo Bailey; Oliver Hofmann; Robert L Sutherland; David A Wheeler; Anthony J Gill; Richard A Gibbs; John V Pearson; Nicola Waddell; Andrew V Biankin; Sean M Grimmond
Journal:  Nature       Date:  2016-02-24       Impact factor: 49.962

2.  Graded requirement for the spliceosome in cell cycle progression.

Authors:  Zemfira Karamysheva; Laura A Díaz-Martínez; Ross Warrington; Hongtao Yu
Journal:  Cell Cycle       Date:  2015       Impact factor: 4.534

3.  Myelodysplastic syndrome-associated spliceosome gene mutations enhance innate immune signaling.

Authors:  Daniel A Pollyea; Chelsea Harris; Jennifer L Rabe; Brenna R Hedin; Lesly De Arras; Sigrid Katz; Emily Wheeler; Rafael Bejar; Matthew J Walter; Craig T Jordan; Eric M Pietras; Scott Alper
Journal:  Haematologica       Date:  2019-03-07       Impact factor: 9.941

Review 4.  Aberrant RNA splicing in cancer; expression changes and driver mutations of splicing factor genes.

Authors:  A Sveen; S Kilpinen; A Ruusulehto; R A Lothe; R I Skotheim
Journal:  Oncogene       Date:  2015-08-24       Impact factor: 9.867

5.  A common alternative splicing signature is associated with SF3B1 mutations in malignancies from different cell lineages.

Authors:  D Gentien; O Kosmider; F Nguyen-Khac; B Albaud; A Rapinat; A G Dumont; F Damm; T Popova; R Marais; M Fontenay; S Roman-Roman; O A Bernard; M-H Stern
Journal:  Leukemia       Date:  2014-01-17       Impact factor: 11.528

Review 6.  The determinants of alternative RNA splicing in human cells.

Authors:  Tatsiana V Ramanouskaya; Vasily V Grinev
Journal:  Mol Genet Genomics       Date:  2017-07-13       Impact factor: 3.291

Review 7.  Cytokine receptor splice variants in hematologic diseases.

Authors:  Borwyn Wang; Hrishikesh Mehta
Journal:  Cytokine       Date:  2019-12-06       Impact factor: 3.861

8.  Apoptosis induction and cell cycle arrest of pladienolide B in erythroleukemia cell lines.

Authors:  Joana Jorge; Sara Petronilho; Raquel Alves; Margarida Coucelo; Ana Cristina Gonçalves; José Manuel Nascimento Costa; Ana Bela Sarmento-Ribeiro
Journal:  Invest New Drugs       Date:  2019-05-31       Impact factor: 3.850

Review 9.  Biology of the mRNA Splicing Machinery and Its Dysregulation in Cancer Providing Therapeutic Opportunities.

Authors:  Maxime Blijlevens; Jing Li; Victor W van Beusechem
Journal:  Int J Mol Sci       Date:  2021-05-12       Impact factor: 5.923

10.  Functional Genomic Screening Reveals Splicing of the EWS-FLI1 Fusion Transcript as a Vulnerability in Ewing Sarcoma.

Authors:  Patrick J Grohar; Suntae Kim; Guillermo O Rangel Rivera; Nirmalya Sen; Sara Haddock; Matt L Harlow; Nichole K Maloney; Jack Zhu; Maura O'Neill; Tamara L Jones; Konrad Huppi; Magdalena Grandin; Kristen Gehlhaus; Carleen A Klumpp-Thomas; Eugen Buehler; Lee J Helman; Scott E Martin; Natasha J Caplen
Journal:  Cell Rep       Date:  2016-01-14       Impact factor: 9.423

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