Literature DB >> 2405164

Zn2+ regulation of ornithine transcarbamoylase. II. Metal binding site.

L C Kuo1, C Caron, S Lee, W Herzberg.   

Abstract

Two types of conformational changes are mediated in Escherichia coli ornithine transcarbamoylase by the metal ion zinc. Upon binding of zinc in rapid equilibrium, the enzyme undergoes an allosteric transition. In the absence of substrates, the zinc-bound enzyme further undergoes a slow isomerization with a concomitant activity loss. Three metal ions are tightly complexed in the isomerized enzyme as determined by gel chromatography and atomic absorption spectroscopy. Since the enzyme is a trimer composed of identical subunits, one zinc ion is bound per enzyme monomer. With the application of site-directed mutagenesis, the cysteinyl residue at position 273 of the enzyme has been identified as a metal ligand. When this residue is replaced by an alanine, zinc is no longer a tight-binding inhibitor and does not promote isomerization. The alteration in the action of zinc on the mutant enzyme is attributed to a reduced metal affinity. The mutant enzyme, when saturated by the metal, displays an intrinsic allostery unchanged from that of the wild-type; an identical Hill coefficient of 1.5 is found for zinc binding to the Ala273 and wild-type enzymes. Cys273 is also a binding site of L-ornithine. At pH 8.5, the Ala273 enzyme binds the substrate analog L-norvaline ten times more weakly and exhibits a kcat/Kmorn that is 27 times less than that of the wild-type enzyme. This finding supports our earlier interpretation that the zinc-induced ornithine co-operativity of ornithine transcarbamoylase is caused by direct competition between L-ornithine and the metal for the same site. As controls, each of the remaining three cysteinyl residues of the bacterial ornithine transcarbamoylase has also been replaced with alanine. These sulfhydryl groups are found not to be related to zinc complexation, ornithine binding or enzyme allostery.

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Year:  1990        PMID: 2405164     DOI: 10.1016/0022-2836(90)90026-I

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  8 in total

1.  cDNA cloning of two isoforms of ornithine carbamoyltransferase from Canavalia lineata leaves and the effect of site-directed mutagenesis of the carbamoyl phosphate binding site.

Authors:  Y Lee; Y A Choi; I D Hwang; S G Kim; Y M Kwon
Journal:  Plant Mol Biol       Date:  2001-08       Impact factor: 4.076

2.  Substrate-induced conformational change in a trimeric ornithine transcarbamoylase.

Authors:  Y Ha; M T McCann; M Tuchman; N M Allewell
Journal:  Proc Natl Acad Sci U S A       Date:  1997-09-02       Impact factor: 11.205

3.  Origin, structure, and regulation of argK, encoding the phaseolotoxin-resistant ornithine carbamoyltransferase in Pseudomonas syringae pv. phaseolicola, and functional expression of argK in transgenic tobacco.

Authors:  E Hatziloukas; N J Panopoulos
Journal:  J Bacteriol       Date:  1992-09       Impact factor: 3.490

4.  Human ornithine transcarbamylase: crystallographic insights into substrate recognition and conformational changes.

Authors:  D Shi; H Morizono; X Yu; L Tong; N M Allewell; M Tuchman
Journal:  Biochem J       Date:  2001-03-15       Impact factor: 3.857

5.  Isolation and characterization of a cDNA encoding a pea ornithine transcarbamoylase (argF) and comparison with other transcarbamoylases.

Authors:  C L Williamson; M R Lake; R D Slocum
Journal:  Plant Mol Biol       Date:  1996-09       Impact factor: 4.076

Review 6.  Functions of the gene products of Escherichia coli.

Authors:  M Riley
Journal:  Microbiol Rev       Date:  1993-12

7.  The molecular basis of ornithine transcarbamylase deficiency: modelling the human enzyme and the effects of mutations.

Authors:  M Tuchman; H Morizono; O Reish; X Yuan; N M Allewell
Journal:  J Med Genet       Date:  1995-09       Impact factor: 6.318

8.  Probing remote residues important for catalysis in Escherichia coli ornithine transcarbamoylase.

Authors:  Lisa Ngu; Jenifer N Winters; Kien Nguyen; Kevin E Ramos; Nicholas A DeLateur; Lee Makowski; Paul C Whitford; Mary Jo Ondrechen; Penny J Beuning
Journal:  PLoS One       Date:  2020-02-06       Impact factor: 3.240

  8 in total

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