Literature DB >> 24051156

Quantitative proteomics reveals that plasma membrane microdomains from poplar cell suspension cultures are enriched in markers of signal transduction, molecular transport, and callose biosynthesis.

Vaibhav Srivastava1, Erik Malm, Gustav Sundqvist, Vincent Bulone.   

Abstract

The plasma membrane (PM) is a highly dynamic interface that contains detergent-resistant microdomains (DRMs). The aim of this work was to determine the main functions of such microdomains in poplar through a proteomic analysis using gel-based and solution (iTRAQ) approaches. A total of 80 proteins from a limited number of functional classes were found to be significantly enriched in DRM relative to PM. The enriched proteins are markers of signal transduction, molecular transport at the PM, or cell wall biosynthesis. Their intrinsic properties are presented and discussed together with the biological significance of their enrichment in DRM. Of particular importance is the significant and specific enrichment of several callose [(1 → 3)-β-glucan] synthase isoforms, whose catalytic activity represents a final response to stress, leading to the deposition of callose plugs at the surface of the PM. An integrated functional model that connects all DRM-enriched proteins identified is proposed. This report is the only quantitative analysis available to date of the protein composition of membrane microdomains from a tree species.

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Year:  2013        PMID: 24051156      PMCID: PMC3861730          DOI: 10.1074/mcp.M113.029033

Source DB:  PubMed          Journal:  Mol Cell Proteomics        ISSN: 1535-9476            Impact factor:   5.911


  78 in total

1.  Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search.

Authors:  Andrew Keller; Alexey I Nesvizhskii; Eugene Kolker; Ruedi Aebersold
Journal:  Anal Chem       Date:  2002-10-15       Impact factor: 6.986

2.  Membranes are more mosaic than fluid.

Authors:  Donald M Engelman
Journal:  Nature       Date:  2005-12-01       Impact factor: 49.962

Review 3.  Shotgun proteomics using the iTRAQ isobaric tags.

Authors:  Kunal Aggarwal; Leila H Choe; Kelvin H Lee
Journal:  Brief Funct Genomic Proteomic       Date:  2006-05-10

4.  Identification of low-density Triton X-100-insoluble plasma membrane microdomains in higher plants.

Authors:  T Peskan; M Westermann; R Oelmüller
Journal:  Eur J Biochem       Date:  2000-12

5.  Characterization of lipid rafts from Medicago truncatula root plasma membranes: a proteomic study reveals the presence of a raft-associated redox system.

Authors:  Benoit Lefebvre; Fabienne Furt; Marie-Andrée Hartmann; Louise V Michaelson; Jean-Pierre Carde; Françoise Sargueil-Boiron; Michel Rossignol; Johnathan A Napier; Julie Cullimore; Jean-Jacques Bessoule; Sébastien Mongrand
Journal:  Plant Physiol       Date:  2007-03-02       Impact factor: 8.340

6.  Plasma membrane microdomains from hybrid aspen cells are involved in cell wall polysaccharide biosynthesis.

Authors:  Laurence Bessueille; Nicolas Sindt; Michel Guichardant; Soraya Djerbi; Tuula T Teeri; Vincent Bulone
Journal:  Biochem J       Date:  2009-04-28       Impact factor: 3.857

7.  The Arabidopsis callose synthase gene GSL8 is required for cytokinesis and cell patterning.

Authors:  Xiong-Yan Chen; Lin Liu; Eunkyoung Lee; Xiao Han; Yeonggil Rim; Hyosub Chu; Seon-Won Kim; Fred Sack; Jae-Yean Kim
Journal:  Plant Physiol       Date:  2009-03-13       Impact factor: 8.340

Review 8.  Plant PA signaling via diacylglycerol kinase.

Authors:  Steven A Arisz; Christa Testerink; Teun Munnik
Journal:  Biochim Biophys Acta       Date:  2009-04-24

9.  Sorting of lipids and transmembrane peptides between detergent-soluble bilayers and detergent-resistant rafts.

Authors:  Thomas J McIntosh; Adriana Vidal; Sidney A Simon
Journal:  Biophys J       Date:  2003-09       Impact factor: 4.033

10.  Analysis of detergent-resistant membranes in Arabidopsis. Evidence for plasma membrane lipid rafts.

Authors:  Georg H H Borner; D Janine Sherrier; Thilo Weimar; Louise V Michaelson; Nathan D Hawkins; Andrew Macaskill; Johnathan A Napier; Michael H Beale; Kathryn S Lilley; Paul Dupree
Journal:  Plant Physiol       Date:  2004-12-23       Impact factor: 8.340

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  14 in total

Review 1.  Callose biosynthesis in Arabidopsis with a focus on pathogen response: what we have learned within the last decade.

Authors:  Dorothea Ellinger; Christian A Voigt
Journal:  Ann Bot       Date:  2014-07-01       Impact factor: 4.357

2.  Specific membrane lipid composition is important for plasmodesmata function in Arabidopsis.

Authors:  Magali S Grison; Lysiane Brocard; Laetitia Fouillen; William Nicolas; Vera Wewer; Peter Dörmann; Houda Nacir; Yoselin Benitez-Alfonso; Stéphane Claverol; Véronique Germain; Yohann Boutté; Sébastien Mongrand; Emmanuelle M Bayer
Journal:  Plant Cell       Date:  2015-03-27       Impact factor: 11.277

3.  Plasma Membrane-Associated Receptor-like Kinases Relocalize to Plasmodesmata in Response to Osmotic Stress.

Authors:  Magali S Grison; Philip Kirk; Marie L Brault; Xu Na Wu; Waltraud X Schulze; Yoselin Benitez-Alfonso; Françoise Immel; Emmanuelle M Bayer
Journal:  Plant Physiol       Date:  2019-07-12       Impact factor: 8.340

4.  Callose homeostasis at plasmodesmata: molecular regulators and developmental relevance.

Authors:  Nico De Storme; Danny Geelen
Journal:  Front Plant Sci       Date:  2014-04-21       Impact factor: 5.753

5.  APP: an Automated Proteomics Pipeline for the analysis of mass spectrometry data based on multiple open access tools.

Authors:  Erik K Malm; Vaibhav Srivastava; Gustav Sundqvist; Vincent Bulone
Journal:  BMC Bioinformatics       Date:  2014-12-30       Impact factor: 3.169

6.  The Oxidosqualene Cyclase from the Oomycete Saprolegnia parasitica Synthesizes Lanosterol as a Single Product.

Authors:  Paul Dahlin; Vaibhav Srivastava; Vincent Bulone; Lauren S McKee
Journal:  Front Microbiol       Date:  2016-11-09       Impact factor: 5.640

Review 7.  Connecting the dots: from nanodomains to physiological functions of REMORINs.

Authors:  Paul Gouguet; Julien Gronnier; Anthony Legrand; Artemis Perraki; Marie-Dominique Jolivet; Anne-Flore Deroubaix; Sylvie German-Retana; Marie Boudsocq; Birgit Habenstein; Sébastien Mongrand; Véronique Germain
Journal:  Plant Physiol       Date:  2021-04-02       Impact factor: 8.340

8.  The use of nanoscale fluorescence microscopic to decipher cell wall modifications during fungal penetration.

Authors:  Dorothea Ellinger; Christian A Voigt
Journal:  Front Plant Sci       Date:  2014-06-18       Impact factor: 5.753

9.  Proteomic Analysis of a Poplar Cell Suspension Culture Suggests a Major Role of Protein S-Acylation in Diverse Cellular Processes.

Authors:  Vaibhav Srivastava; Joseph R Weber; Erik Malm; Bruce W Fouke; Vincent Bulone
Journal:  Front Plant Sci       Date:  2016-04-12       Impact factor: 5.753

10.  Quantitative Proteomic Analysis of Four Developmental Stages of Saprolegnia parasitica.

Authors:  Vaibhav Srivastava; Svetlana Rezinciuc; Vincent Bulone
Journal:  Front Microbiol       Date:  2018-01-11       Impact factor: 5.640

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