| Literature DB >> 24050113 |
Shah M Rashed, Anwarul Iqbal, Shahnewaj B Mannan, Tarequl Islam, Mahamud-Ur Rashid, Fatema-Tuz Johura, Haruo Watanabe, Nur A Hasan, Anwar Huq, O Colin Stine, R Bradley Sack, Rita R Colwell, Munirul Alam.
Abstract
Entities:
Keywords: PFGE; Vibrio cholerae; altered El Tor; antibiotic resistance; bacteria; ctxBCL; ctxBET; prototype El Tor; pulsed-field gel electrophoresis
Mesh:
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Year: 2013 PMID: 24050113 PMCID: PMC3810759 DOI: 10.3201/eid1910.130626
Source DB: PubMed Journal: Emerg Infect Dis ISSN: 1080-6040 Impact factor: 6.883
FigureDNA fingerprinting patterns of Vibrio cholerae. Dendrogram was prepared by Dice similarity coefficient and UPGMA (unweighted pair-group method with arithmetic mean) clustering methods by using pulsed-field gel electrophoresis (PFGE) images of the NotI-digested genomic DNA. The scale bar at the top (left) indicates the correlation coefficient (range 90%–100%). V. cholerae altered ET (ctxBCL) strains (pulsotype A) formed a major cluster (cluster I), separated from prototype ET (ctxBET) strains (cluster II; pulsotype B) and V. cholerae O139 strains (cluster III; pulsotype C), suggesting that they are genetically different. ET, El Tor; Clin, Clinical; Env, environmental.