Literature DB >> 24048767

Kinetics of acrylodan-labelled cAMP-dependent protein kinase catalytic subunit denaturation.

Rait Kivi1, Mart Loog, Per Jemth, Jaak Järv.   

Abstract

Fluorescence spectroscopy was used to study denaturation of cAMP-dependent protein kinase catalytic subunit labeled with an acrylodan moiety. The dye was covalently bound to a cystein residue introduced into the enzyme by replacement of arginine in position 326 in the native sequence, located near the enzyme active center. This labeling had no effect on catalytic activity of the enzyme, but provided possibility to monitor changes in protein structure through measuring the fluorescence spectrum of the dye, which is sensitive to changes in its environment. This method was used to monitor denaturation of the protein kinase catalytic subunit and study the kinetics of this process as well as influence of specific ligands on stability of the protein. Stabilization of the enzyme structure was observed in the presence of adenosine triphosphate, peptide substrate RRYSV and inhibitor peptide PKI[5-24].

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Year:  2013        PMID: 24048767     DOI: 10.1007/s10930-013-9511-4

Source DB:  PubMed          Journal:  Protein J        ISSN: 1572-3887            Impact factor:   2.371


  12 in total

1.  Thermal stability of proteins in intermolecular complexes.

Authors:  I G Denisov
Journal:  Biophys Chem       Date:  1992-08       Impact factor: 2.352

Review 2.  PKA: a portrait of protein kinase dynamics.

Authors:  S S Taylor; J Yang; J Wu; N M Haste; E Radzio-Andzelm; G Anand
Journal:  Biochim Biophys Acta       Date:  2004-03-11

Review 3.  Thermal denaturation assays in chemical biology.

Authors:  Guillermo Senisterra; Irene Chau; Masoud Vedadi
Journal:  Assay Drug Dev Technol       Date:  2011-11-08       Impact factor: 1.738

4.  Effect of metal ions on high-affinity binding of pseudosubstrate inhibitors to PKA.

Authors:  Bastian Zimmermann; Sonja Schweinsberg; Stephan Drewianka; Friedrich W Herberg
Journal:  Biochem J       Date:  2008-07-01       Impact factor: 3.857

5.  Synergistic binding of nucleotides and inhibitors to cAMP-dependent protein kinase examined by acrylodan fluorescence spectroscopy.

Authors:  J Lew; N Coruh; I Tsigelny; S Garrod; S S Taylor
Journal:  J Biol Chem       Date:  1997-01-17       Impact factor: 5.157

6.  Denaturing RNA electrophoresis in TAE agarose gels.

Authors:  Tomas Masek; Vaclav Vopalensky; Petra Suchomelova; Martin Pospisek
Journal:  Anal Biochem       Date:  2005-01-01       Impact factor: 3.365

7.  Kinetic analysis of inhibition of cAMP-dependent protein kinase catalytic subunit by the peptide-nucleoside conjugate AdcAhxArg6.

Authors:  Aleksei Kuznetsov; Asko Uri; Gerda Raidaru; Jaak Järv
Journal:  Bioorg Chem       Date:  2004-12       Impact factor: 5.275

8.  Dynamic features of cAMP-dependent protein kinase revealed by apoenzyme crystal structure.

Authors:  Pearl Akamine; Jian Wu; Nguyen-Huu Xuong; Lynn F Ten Eyck; Susan S Taylor
Journal:  J Mol Biol       Date:  2003-03-14       Impact factor: 5.469

9.  Crystal structure of the catalytic subunit of cAMP-dependent protein kinase complexed with MgATP and peptide inhibitor.

Authors:  J Zheng; D R Knighton; L F ten Eyck; R Karlsson; N Xuong; S S Taylor; J M Sowadski
Journal:  Biochemistry       Date:  1993-03-09       Impact factor: 3.162

10.  Synthesis, spectral properties, and use of 6-acryloyl-2-dimethylaminonaphthalene (Acrylodan). A thiol-selective, polarity-sensitive fluorescent probe.

Authors:  F G Prendergast; M Meyer; G L Carlson; S Iida; J D Potter
Journal:  J Biol Chem       Date:  1983-06-25       Impact factor: 5.157

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  5 in total

1.  Allosteric Effect of Adenosine Triphosphate on Peptide Recognition by 3'5'-Cyclic Adenosine Monophosphate Dependent Protein Kinase Catalytic Subunits.

Authors:  Rait Kivi; Karina Solovjova; Tõiv Haljasorg; Piret Arukuusk; Jaak Järv
Journal:  Protein J       Date:  2016-12       Impact factor: 2.371

2.  Thermodynamic aspects of cAMP dependent protein kinase catalytic subunit allostery.

Authors:  Rait Kivi; Per Jemth; Jaak Järv
Journal:  Protein J       Date:  2014-08       Impact factor: 2.371

3.  Different States of Acrylodan-Labeled 3'5'-Cyclic Adenosine Monophosphate Dependent Protein Kinase Catalytic Subunits in Denaturant Solutions.

Authors:  Rait Kivi; Jaak Järv
Journal:  Protein J       Date:  2016-10       Impact factor: 2.371

4.  The sequence at Spike S1/S2 site enables cleavage by furin and phospho-regulation in SARS-CoV2 but not in SARS-CoV1 or MERS-CoV.

Authors:  Mihkel Örd; Ilona Faustova; Mart Loog
Journal:  Sci Rep       Date:  2020-10-09       Impact factor: 4.379

5.  Regulation of trehalase activity by multi-site phosphorylation and 14-3-3 interaction.

Authors:  Lisa Dengler; Mihkel Örd; Lucca M Schwab; Mart Loog; Jennifer C Ewald
Journal:  Sci Rep       Date:  2021-01-13       Impact factor: 4.379

  5 in total

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