Literature DB >> 24047991

Real-time visualization of assembling of a sphingomyelin-specific toxin on planar lipid membranes.

Neval Yilmaz1, Taro Yamada, Peter Greimel, Takayuki Uchihashi, Toshio Ando, Toshihide Kobayashi.   

Abstract

Pore-forming toxins (PFTs) are soluble proteins that can oligomerize on the cell membrane and induce cell death by membrane insertion. PFT oligomers sometimes form hexagonal close-packed (hcp) structures on the membrane. Here, we show the assembling of the sphingomyelin (SM)-binding PFT, lysenin, into an hcp structure after oligomerization on SM/cholesterol membrane. This process was monitored by high-speed atomic force microscopy. Hcp assembly was driven by reorganization of lysenin oligomers such as association/dissociation and rapid diffusion along the membrane. Besides rapid association/dissociation of oligomers, the height change for some oligomers, possibly resulting from conformational changes in lysenin, could also be visualized. After the entire membrane surface was covered with a well-ordered oligomer lattice, the lysenin molecules were firmly bound on the membrane and the oligomers neither dissociated nor diffused. Our results reveal the dynamic nature of the oligomers of a lipid-binding toxin during the formation of an hcp structure. Visualization of this dynamic process is essential for the elucidation of the assembling mechanism of some PFTs that can form ordered structures on the membrane.
Copyright © 2013 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2013        PMID: 24047991      PMCID: PMC3785888          DOI: 10.1016/j.bpj.2013.07.052

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  33 in total

1.  Aeolotopic interactions of globular proteins.

Authors:  A Lomakin; N Asherie; G B Benedek
Journal:  Proc Natl Acad Sci U S A       Date:  1999-08-17       Impact factor: 11.205

2.  The vacuolating toxin from Helicobacter pylori forms hexameric pores in lipid bilayers at low pH.

Authors:  D M Czajkowsky; H Iwamoto; T L Cover; Z Shao
Journal:  Proc Natl Acad Sci U S A       Date:  1999-03-02       Impact factor: 11.205

3.  Scalable molecular dynamics with NAMD.

Authors:  James C Phillips; Rosemary Braun; Wei Wang; James Gumbart; Emad Tajkhorshid; Elizabeth Villa; Christophe Chipot; Robert D Skeel; Laxmikant Kalé; Klaus Schulten
Journal:  J Comput Chem       Date:  2005-12       Impact factor: 3.376

4.  Dynamics of bacteriorhodopsin 2D crystal observed by high-speed atomic force microscopy.

Authors:  Hayato Yamashita; Kislon Voïtchovsky; Takayuki Uchihashi; Sonia Antoranz Contera; John F Ryan; Toshio Ando
Journal:  J Struct Biol       Date:  2009-05-03       Impact factor: 2.867

5.  Cholesterol and lipid/protein ratio control the oligomerization of a sphingomyelin-specific toxin, lysenin.

Authors:  Reiko Ishitsuka; Toshihide Kobayashi
Journal:  Biochemistry       Date:  2007-01-23       Impact factor: 3.162

6.  A complementary microscopy analysis of Sticholysin II crystals on lipid films: Atomic force and transmission electron characterizations.

Authors:  José M Mancheño; Jaime Martín-Benito; José G Gavilanes; Luis Vázquez
Journal:  Biophys Chem       Date:  2005-10-12       Impact factor: 2.352

Review 7.  Lysenin: a sphingomyelin specific pore-forming toxin.

Authors:  Hidehiko Shogomori; Toshihide Kobayashi
Journal:  Biochim Biophys Acta       Date:  2007-09-15

Review 8.  Principles of bioactive lipid signalling: lessons from sphingolipids.

Authors:  Yusuf A Hannun; Lina M Obeid
Journal:  Nat Rev Mol Cell Biol       Date:  2008-02       Impact factor: 94.444

Review 9.  Lipid rafts as a membrane-organizing principle.

Authors:  Daniel Lingwood; Kai Simons
Journal:  Science       Date:  2010-01-01       Impact factor: 47.728

10.  I-TASSER server for protein 3D structure prediction.

Authors:  Yang Zhang
Journal:  BMC Bioinformatics       Date:  2008-01-23       Impact factor: 3.169

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  20 in total

1.  High-speed atomic force microscopy tracks toxin action.

Authors:  Simon Scheuring
Journal:  Biophys J       Date:  2013-09-17       Impact factor: 4.033

2.  Lipid Chirality Revisited: A Change in Lipid Configuration Transforms Membrane-Bound Protein Domains.

Authors:  Frederic Eghiaian
Journal:  Biophys J       Date:  2015-06-16       Impact factor: 4.033

Review 3.  Molecular mechanism of pore formation by aerolysin-like proteins.

Authors:  Marjetka Podobnik; Matic Kisovec; Gregor Anderluh
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2017-08-05       Impact factor: 6.237

4.  Red Blood Cell Susceptibility to Pneumolysin: CORRELATION WITH MEMBRANE BIOCHEMICAL AND PHYSICAL PROPERTIES.

Authors:  Monika Bokori-Brown; Peter G Petrov; Mawya A Khafaji; Muhammad K Mughal; Claire E Naylor; Angela C Shore; Kim M Gooding; Francesco Casanova; Tim J Mitchell; Richard W Titball; C Peter Winlove
Journal:  J Biol Chem       Date:  2016-03-16       Impact factor: 5.157

5.  Intramembrane congestion effects on lysenin channel voltage-induced gating.

Authors:  Eric Krueger; Sheenah Bryant; Nisha Shrestha; Tyler Clark; Charles Hanna; David Pink; Daniel Fologea
Journal:  Eur Biophys J       Date:  2015-12-22       Impact factor: 1.733

6.  Visualizing the Domino-Like Prepore-to-Pore Transition of Streptolysin O by High-Speed AFM.

Authors:  Hirotaka Ariyama
Journal:  J Membr Biol       Date:  2022-08-18       Impact factor: 2.426

7.  Tuning membrane protein mobility by confinement into nanodomains.

Authors:  Andreas Karner; Benedikt Nimmervoll; Birgit Plochberger; Enrico Klotzsch; Andreas Horner; Denis G Knyazev; Roland Kuttner; Klemens Winkler; Lukas Winter; Christine Siligan; Nicole Ollinger; Peter Pohl; Johannes Preiner
Journal:  Nat Nanotechnol       Date:  2016-11-14       Impact factor: 39.213

Review 8.  Filming biomolecular processes by high-speed atomic force microscopy.

Authors:  Toshio Ando; Takayuki Uchihashi; Simon Scheuring
Journal:  Chem Rev       Date:  2014-01-30       Impact factor: 60.622

9.  Listeriolysin O Membrane Damaging Activity Involves Arc Formation and Lineaction -- Implication for Listeria monocytogenes Escape from Phagocytic Vacuole.

Authors:  Yi Ruan; Saša Rezelj; Apolonija Bedina Zavec; Gregor Anderluh; Simon Scheuring
Journal:  PLoS Pathog       Date:  2016-04-22       Impact factor: 6.823

10.  Lysenin Toxin Membrane Insertion Is pH-Dependent but Independent of Neighboring Lysenins.

Authors:  Ignacio L B Munguira; Hirohide Takahashi; Ignacio Casuso; Simon Scheuring
Journal:  Biophys J       Date:  2017-11-07       Impact factor: 4.033

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