Literature DB >> 24046682

7-Bromo-3,3-dibutyl-8-meth-oxy-2,3-di-hydro-1,5-benzothia-zepin-4(5H)-one.

C V Deepu1, M Manjula, K J Pampa, D G Bhadregowda, N K Lokanath.   

Abstract

In the title compound C18H26BrNO2S, the thia-zepine ring adopts a boat conformation. The dihedral angle between the mean planes through the benzene ring and the four C atoms making up the basal plane of the boat is 35.8 (2)°. In the crystal, inversion dimers linked by pairs of N-H⋯O hydrogen bonds generate R 2 (2)(8) loops.

Entities:  

Year:  2013        PMID: 24046682      PMCID: PMC3770397          DOI: 10.1107/S1600536813013238

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For reference bond lengths, see: Allen et al. (1987 ▶). For background to the uses of this class of compounds, see: Fedi et al. (2008 ▶); Ganesh et al. (2011 ▶); Riedel et al. (2007 ▶).

Experimental

Crystal data

C18H26BrNO2S M = 400.30 Monoclinic, a = 7.7844 (18) Å b = 11.251 (2) Å c = 22.039 (6) Å β = 98.199 (8)° V = 1910.5 (8) Å3 Z = 4 Mo Kα radiation μ = 2.27 mm−1 T = 100 K 0.32 × 0.20 × 0.20 mm

Data collection

Oxford Diffraction Xcalibur Eos diffractometer 16056 measured reflections 4662 independent reflections 2750 reflections with I > 2σ(I) R int = 0.054

Refinement

R[F 2 > 2σ(F 2)] = 0.048 wR(F 2) = 0.141 S = 1.03 4662 reflections 212 parameters H-atom parameters constrained Δρmax = 0.63 e Å−3 Δρmin = −0.49 e Å−3 Data collection: CrysAlis PRO (Oxford Diffraction, 2009 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: Mercury (Macrae et al., 2006 ▶); software used to prepare material for publication: Mercury. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536813013238/hb7081sup1.cif Structure factors: contains datablock(s) mm. DOI: 10.1107/S1600536813013238/hb7081Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813013238/hb7081Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C18H26BrNO2SF(000) = 832
Mr = 400.30Dx = 1.392 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 4662 reflections
a = 7.7844 (18) Åθ = 2.0–28.3°
b = 11.251 (2) ŵ = 2.27 mm1
c = 22.039 (6) ÅT = 100 K
β = 98.199 (8)°Block, light brown
V = 1910.5 (8) Å30.32 × 0.20 × 0.20 mm
Z = 4
Oxford Diffraction Xcalibur Eos diffractometer2750 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.054
Graphite monochromatorθmax = 28.3°, θmin = 2.0°
Detector resolution: 16.0839 pixels mm-1h = −10→8
ω scansk = −14→9
16056 measured reflectionsl = −29→29
4662 independent reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.048Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.141H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.1275P)2 + 0.4493P] where P = (Fo2 + 2Fc2)/3
4662 reflections(Δ/σ)max = 0.001
212 parametersΔρmax = 0.63 e Å3
0 restraintsΔρmin = −0.49 e Å3
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell esds are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement on F2 for ALL reflections except those flagged by the user for potential systematic errors. Weighted R-factors wR and all goodnesses of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The observed criterion of F2 > 2sigma(F2) is used only for calculating -R-factor-obs etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
Br90.72841 (5)0.01588 (4)0.86915 (2)0.0731 (2)
S100.09376 (11)0.21269 (7)0.99530 (4)0.0494 (3)
O20.4327 (3)−0.12202 (18)0.90398 (11)0.0548 (8)
O150.2816 (3)0.53731 (17)0.97428 (10)0.0420 (7)
N140.3916 (3)0.35886 (16)0.95950 (10)0.0418 (8)
C10.3047 (3)−0.20519 (16)0.91627 (10)0.0621 (15)
C30.4122 (4)−0.0060 (2)0.91890 (15)0.0399 (10)
C40.2747 (4)0.0385 (3)0.94491 (15)0.0412 (10)
C50.2640 (4)0.1590 (2)0.95831 (14)0.0383 (10)
C60.3919 (3)0.2370 (2)0.94450 (14)0.0377 (9)
C70.5283 (4)0.1922 (3)0.91780 (15)0.0424 (10)
C80.5387 (4)0.0733 (3)0.90492 (15)0.0435 (10)
C11−0.0156 (4)0.3122 (3)0.93772 (15)0.0460 (10)
C120.0909 (4)0.4072 (3)0.90861 (14)0.0386 (9)
C130.2596 (3)0.4382 (2)0.95076 (14)0.0353 (9)
C16−0.0182 (4)0.5206 (3)0.89941 (17)0.0481 (11)
C17−0.1953 (5)0.5099 (3)0.8591 (2)0.0743 (16)
C18−0.2889 (6)0.6281 (5)0.8496 (2)0.0915 (19)
C19−0.2269 (11)0.7005 (6)0.8047 (4)0.165 (4)
C200.1333 (4)0.3605 (3)0.84640 (14)0.0467 (11)
C210.2456 (6)0.4427 (4)0.81384 (18)0.0743 (16)
C220.2854 (7)0.3940 (6)0.7533 (2)0.105 (2)
C230.3966 (11)0.4756 (7)0.7214 (3)0.165 (4)
H1A0.30480−0.210900.959700.0940*
H1B0.33020−0.281600.900400.0940*
H1C0.19260−0.179200.897000.0940*
H40.18770−0.012700.953600.0490*
H70.614600.243400.908400.0510*
H11A−0.073900.263500.904700.0550*
H11B−0.105200.353400.955900.076 (12)*
H140.489300.386800.976700.061 (10)*
H16A0.049000.580500.881500.0580*
H16B−0.037200.549400.939400.053 (10)*
H17A−0.178800.477600.819600.0890*
H17B−0.267100.454700.878100.0890*
H18A−0.411700.613400.837400.1100*
H18B−0.275800.670800.888200.1100*
H19A−0.123800.741300.822700.2470*
H19B−0.314200.757600.789500.2470*
H19C−0.200700.651600.771500.2470*
H20A0.192100.284600.853200.0560*
H20B0.025200.346600.819600.0560*
H21A0.186900.518500.806600.0890*
H21B0.354000.456800.840500.0890*
H22A0.344100.318200.760500.1260*
H22B0.177100.380000.726600.1260*
H23A0.327300.540300.703100.2480*
H23B0.444000.432300.690000.2480*
H23C0.489400.506100.750500.2480*
U11U22U33U12U13U23
Br90.0585 (3)0.0543 (3)0.1145 (4)0.0039 (2)0.0399 (2)−0.0172 (2)
S100.0463 (5)0.0452 (5)0.0608 (6)−0.0023 (3)0.0220 (4)−0.0027 (4)
O20.0634 (15)0.0289 (11)0.0748 (16)−0.0011 (10)0.0188 (12)−0.0065 (11)
O150.0329 (11)0.0317 (11)0.0600 (14)−0.0040 (8)0.0020 (10)−0.0114 (10)
N140.0289 (13)0.0310 (13)0.0642 (17)−0.0052 (10)0.0019 (12)−0.0106 (12)
C10.077 (3)0.0328 (18)0.076 (3)−0.0101 (17)0.009 (2)−0.0023 (17)
C30.0439 (17)0.0286 (15)0.0460 (19)−0.0026 (12)0.0022 (14)−0.0037 (13)
C40.0390 (16)0.0333 (16)0.052 (2)−0.0074 (12)0.0092 (14)−0.0011 (14)
C50.0352 (16)0.0348 (16)0.0456 (18)−0.0019 (12)0.0082 (13)−0.0042 (13)
C60.0296 (14)0.0308 (15)0.0513 (19)−0.0023 (11)0.0010 (13)−0.0054 (13)
C70.0292 (15)0.0367 (16)0.062 (2)−0.0051 (12)0.0090 (14)−0.0041 (15)
C80.0360 (16)0.0391 (17)0.057 (2)0.0014 (13)0.0125 (14)−0.0067 (15)
C110.0302 (15)0.0442 (17)0.064 (2)−0.0063 (13)0.0080 (15)−0.0109 (16)
C120.0308 (15)0.0375 (16)0.0469 (18)−0.0047 (12)0.0033 (13)−0.0078 (14)
C130.0297 (14)0.0309 (15)0.0464 (18)−0.0038 (11)0.0097 (13)−0.0034 (13)
C160.0361 (17)0.0452 (18)0.061 (2)−0.0002 (13)−0.0003 (16)−0.0098 (16)
C170.050 (2)0.064 (3)0.099 (3)0.0067 (18)−0.023 (2)−0.008 (2)
C180.072 (3)0.098 (4)0.093 (3)0.040 (3)−0.028 (3)−0.029 (3)
C190.200 (8)0.089 (4)0.193 (8)0.039 (5)−0.013 (7)0.019 (5)
C200.0398 (17)0.0490 (19)0.050 (2)−0.0056 (14)0.0020 (14)−0.0106 (15)
C210.083 (3)0.088 (3)0.055 (2)−0.022 (2)0.021 (2)−0.006 (2)
C220.108 (4)0.159 (5)0.052 (3)−0.046 (4)0.026 (3)−0.017 (3)
C230.151 (7)0.270 (10)0.081 (4)−0.078 (6)0.037 (4)−0.028 (5)
Br9—C81.885 (3)C1—H1A0.9600
S10—C51.759 (3)C1—H1B0.9600
S10—C111.811 (3)C1—H1C0.9600
O2—C11.421 (3)C4—H40.9300
O2—C31.361 (3)C7—H70.9300
O15—C131.231 (3)C11—H11A0.9700
N14—C61.410 (3)C11—H11B0.9700
N14—C131.354 (3)C16—H16A0.9700
N14—H140.8600C16—H16B0.9700
C3—C41.378 (4)C17—H17A0.9700
C3—C81.395 (4)C17—H17B0.9700
C4—C51.393 (4)C18—H18A0.9700
C5—C61.393 (4)C18—H18B0.9700
C6—C71.381 (4)C19—H19A0.9600
C7—C81.372 (5)C19—H19B0.9600
C11—C121.547 (5)C19—H19C0.9600
C12—C131.537 (4)C20—H20A0.9700
C12—C161.530 (5)C20—H20B0.9700
C12—C201.547 (4)C21—H21A0.9700
C16—C171.535 (5)C21—H21B0.9700
C17—C181.517 (6)C22—H22A0.9700
C18—C191.418 (9)C22—H22B0.9700
C20—C211.521 (6)C23—H23A0.9600
C21—C221.515 (6)C23—H23B0.9600
C22—C231.503 (10)C23—H23C0.9600
C5—S10—C11101.39 (14)S10—C11—H11B107.00
C1—O2—C3118.4 (2)C12—C11—H11A107.00
C6—N14—C13129.4 (2)C12—C11—H11B107.00
C13—N14—H14115.00H11A—C11—H11B107.00
C6—N14—H14115.00C12—C16—H16A108.00
C4—C3—C8118.3 (3)C12—C16—H16B108.00
O2—C3—C4125.0 (3)C17—C16—H16A108.00
O2—C3—C8116.7 (3)C17—C16—H16B108.00
C3—C4—C5121.0 (3)H16A—C16—H16B107.00
S10—C5—C4120.3 (2)C16—C17—H17A109.00
S10—C5—C6119.61 (18)C16—C17—H17B109.00
C4—C5—C6120.1 (3)C18—C17—H17A109.00
N14—C6—C5122.4 (2)C18—C17—H17B109.00
C5—C6—C7118.7 (2)H17A—C17—H17B108.00
N14—C6—C7118.8 (2)C17—C18—H18A109.00
C6—C7—C8121.1 (3)C17—C18—H18B109.00
Br9—C8—C3119.5 (2)C19—C18—H18A109.00
Br9—C8—C7119.6 (2)C19—C18—H18B109.00
C3—C8—C7120.9 (3)H18A—C18—H18B108.00
S10—C11—C12119.4 (2)C18—C19—H19A110.00
C11—C12—C20109.1 (3)C18—C19—H19B109.00
C13—C12—C16107.5 (3)C18—C19—H19C109.00
C13—C12—C20109.9 (2)H19A—C19—H19B109.00
C16—C12—C20110.5 (3)H19A—C19—H19C109.00
C11—C12—C16108.1 (3)H19B—C19—H19C110.00
C11—C12—C13111.6 (2)C12—C20—H20A109.00
O15—C13—C12121.0 (2)C12—C20—H20B109.00
O15—C13—N14118.7 (2)C21—C20—H20A109.00
N14—C13—C12120.1 (2)C21—C20—H20B109.00
C12—C16—C17116.6 (3)H20A—C20—H20B108.00
C16—C17—C18112.7 (3)C20—C21—H21A109.00
C17—C18—C19113.3 (5)C20—C21—H21B109.00
C12—C20—C21114.9 (3)C22—C21—H21A109.00
C20—C21—C22113.5 (4)C22—C21—H21B109.00
C21—C22—C23113.3 (5)H21A—C21—H21B108.00
O2—C1—H1A109.00C21—C22—H22A109.00
O2—C1—H1B109.00C21—C22—H22B109.00
O2—C1—H1C109.00C23—C22—H22A109.00
H1A—C1—H1B109.00C23—C22—H22B109.00
H1A—C1—H1C109.00H22A—C22—H22B108.00
H1B—C1—H1C110.00C22—C23—H23A109.00
C3—C4—H4119.00C22—C23—H23B109.00
C5—C4—H4119.00C22—C23—H23C110.00
C6—C7—H7120.00H23A—C23—H23B109.00
C8—C7—H7119.00H23A—C23—H23C110.00
S10—C11—H11A107.00H23B—C23—H23C109.00
C11—S10—C5—C4−117.4 (3)C5—C6—C7—C80.0 (5)
C11—S10—C5—C665.0 (3)C6—C7—C8—Br9−179.4 (2)
C5—S10—C11—C12−51.1 (3)C6—C7—C8—C3−0.5 (5)
C1—O2—C3—C4−0.6 (5)S10—C11—C12—C13−23.9 (4)
C1—O2—C3—C8−178.7 (3)S10—C11—C12—C16−142.0 (2)
C13—N14—C6—C5−47.0 (4)S10—C11—C12—C2097.8 (3)
C13—N14—C6—C7136.2 (3)C11—C12—C13—O15−113.0 (3)
C6—N14—C13—O15170.9 (3)C11—C12—C13—N1471.2 (3)
C6—N14—C13—C12−13.2 (4)C16—C12—C13—O155.4 (4)
O2—C3—C4—C5−179.6 (3)C16—C12—C13—N14−170.4 (3)
C8—C3—C4—C5−1.5 (5)C20—C12—C13—O15125.7 (3)
O2—C3—C8—Br9−1.6 (4)C20—C12—C13—N14−50.0 (4)
O2—C3—C8—C7179.5 (3)C11—C12—C16—C17−58.6 (4)
C4—C3—C8—Br9−179.9 (2)C13—C12—C16—C17−179.2 (3)
C4—C3—C8—C71.2 (5)C20—C12—C16—C1760.8 (4)
C3—C4—C5—S10−176.5 (3)C11—C12—C20—C21−177.2 (3)
C3—C4—C5—C61.1 (5)C13—C12—C20—C21−54.5 (4)
S10—C5—C6—N140.5 (4)C16—C12—C20—C2164.1 (4)
S10—C5—C6—C7177.3 (2)C12—C16—C17—C18−176.6 (3)
C4—C5—C6—N14−177.2 (3)C16—C17—C18—C1979.1 (6)
C4—C5—C6—C7−0.3 (5)C12—C20—C21—C22179.7 (3)
N14—C6—C7—C8177.0 (3)C20—C21—C22—C23−179.9 (5)
D—H···AD—HH···AD···AD—H···A
N14—H14···O15i0.862.132.985 (3)175
C11—H11B···O15ii0.972.523.473 (4)166
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N14—H14⋯O15i 0.862.132.985 (3)175

Symmetry code: (i) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

Review 2.  Tricyclic structures in medicinal chemistry: an overview of their recent uses in non-CNS pathologies.

Authors:  V Fedi; A Guidi; M Altamura
Journal:  Mini Rev Med Chem       Date:  2008-12       Impact factor: 3.862

  2 in total

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