Literature DB >> 24046551

Poly[[penta-aqua-bis-(μ3-hydrogen squarato)barium] monohydrate].

Chahrazed Trifa1, Amira Bouhali, Sofiane Bouacida, Chaouki Boudaren, Hocine Merazig.   

Abstract

The crystal structure of the title compound, {[Ba(C4HO4)2(H2O)5]·H2O} n , consists of discrete double chains propagating along [010]. The chains are formed by Ba(II) ions linked by bridging hydrogen squarate ligands in a trans-bis-monodentate mode. In addition, the bridging hydrogen squarate ligands connect the chains into a ladder structure via a third coordinating O atom. The remaining coordination sites are occupied by five aqua ligands and a second mondendate hydrogen squarate ligand, forming a slightly distorted tricapped trigonal-prismatic geometry. O-H⋯O hydrogen bonds link the chains and solvent water mol-ecules into a three-dimensional network.

Entities:  

Year:  2013        PMID: 24046551      PMCID: PMC3772408          DOI: 10.1107/S1600536813014736

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis and applications of cyclic oxocarbons, see: Cohen et al. (1959 ▶); Bertolasi et al. (2001 ▶). For crystal structures of hydrogen squarate complexes, see: Brach et al. (1987 ▶); Uçar et al. (2005 ▶); Lee et al. (1996 ▶). For related alkaline earth squarates, see: Robl & Weiss (1986a ▶,b ▶); Koferstein & Robl (2002 ▶). For other related structures, see: Trifa et al. (2011 ▶); Bouhali et al. (2011 ▶). For the bond-valence method, see: Hormillosa et al. (1993 ▶).

Experimental

Crystal data

[Ba(C4HO4)2(H2O)5]·H2O M = 471.53 Monoclinic, a = 11.1522 (11) Å b = 9.0268 (8) Å c = 14.3025 (14) Å β = 94.009 (5)° V = 1436.3 (2) Å3 Z = 4 Mo Kα radiation μ = 2.84 mm−1 T = 150 K 0.12 × 0.1 × 0.09 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2002 ▶) T min = 0.731, T max = 1.000 12082 measured reflections 2550 independent reflections 2471 reflections with I > 2σ(I) R int = 0.022

Refinement

R[F 2 > 2σ(F 2)] = 0.013 wR(F 2) = 0.034 S = 1.06 2550 reflections 264 parameters All H-atom parameters refined Δρmax = 0.53 e Å−3 Δρmin = −0.25 e Å−3 Data collection: APEX2 (Bruker, 2011 ▶); cell refinement: SAINT (Bruker, 2011 ▶); data reduction: SAINT; program(s) used to solve structure: SIR2002 (Burla et al., 2005 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶) and DIAMOND (Brandenburg & Berndt, 2001 ▶); software used to prepare material for publication: WinGX (Farrugia, 2012 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536813014736/lh5617sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813014736/lh5617Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Ba(C4HO4)2(H2O)5]·H2OF(000) = 920
Mr = 471.53Dx = 2.181 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 9365 reflections
a = 11.1522 (11) Åθ = 2.3–25.1°
b = 9.0268 (8) ŵ = 2.84 mm1
c = 14.3025 (14) ÅT = 150 K
β = 94.009 (5)°Bloc, yellow
V = 1436.3 (2) Å30.12 × 0.1 × 0.09 mm
Z = 4
Bruker APEXII CCD diffractometer2550 independent reflections
Radiation source: sealed tube2471 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.022
φ and ω scansθmax = 25.1°, θmin = 2.7°
Absorption correction: multi-scan (SADABS; Sheldrick, 2002)h = −13→13
Tmin = 0.731, Tmax = 1.000k = −10→10
12082 measured reflectionsl = −17→17
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.013Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.034All H-atom parameters refined
S = 1.06w = 1/[σ2(Fo2) + (0.0174P)2 + 0.8037P] where P = (Fo2 + 2Fc2)/3
2550 reflections(Δ/σ)max = 0.003
264 parametersΔρmax = 0.53 e Å3
0 restraintsΔρmin = −0.25 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Ba10.676848 (7)0.760410 (9)0.685367 (6)0.00657 (5)
O4W0.83608 (12)0.75740 (13)0.84885 (10)0.0117 (3)
O10.67679 (9)1.02235 (11)0.77441 (7)0.0100 (2)
C30.76489 (13)1.36306 (16)0.72323 (10)0.0076 (3)
O60.90411 (9)0.87276 (11)0.65721 (7)0.0098 (2)
C40.66220 (13)1.30175 (17)0.77342 (10)0.0075 (3)
C10.70789 (13)1.14962 (16)0.75478 (10)0.0077 (3)
O3W0.56965 (11)0.65706 (14)0.83609 (8)0.0139 (2)
O20.89727 (9)1.16255 (12)0.66655 (8)0.0103 (2)
O50.99133 (10)0.52766 (11)0.61707 (8)0.0114 (2)
C20.80471 (14)1.21456 (17)0.70706 (11)0.0080 (3)
O2W0.65618 (12)0.97776 (13)0.54757 (8)0.0154 (2)
O71.13514 (9)0.98991 (11)0.55422 (7)0.0107 (2)
O1W0.73539 (11)0.64714 (14)0.51598 (9)0.0155 (3)
O81.20517 (9)0.64982 (11)0.50651 (8)0.0112 (2)
C71.09085 (13)0.86799 (16)0.56650 (10)0.0075 (3)
C51.02281 (13)0.66277 (17)0.59606 (11)0.0083 (3)
C60.98586 (13)0.81173 (17)0.61497 (10)0.0074 (3)
O30.79995 (9)1.49094 (11)0.70579 (7)0.0093 (2)
C81.12363 (14)0.71099 (17)0.54615 (11)0.0083 (3)
O40.57822 (9)1.35215 (11)0.81426 (7)0.0103 (2)
O11W0.56817 (12)0.28422 (13)0.52709 (8)0.0116 (2)
O5W0.51886 (10)0.54413 (12)0.62332 (8)0.0111 (2)
H4A0.860 (2)0.681 (3)0.8658 (15)0.022 (6)*
H11A0.634 (2)0.293 (2)0.5207 (14)0.016 (5)*
H1B0.7564 (19)0.556 (3)0.5121 (15)0.030 (6)*
H1A0.750 (2)0.685 (3)0.4720 (18)0.033 (7)*
H4B0.892 (2)0.813 (3)0.8462 (16)0.034 (7)*
H3A0.5667 (19)0.563 (3)0.8392 (15)0.031 (6)*
H5A0.535 (2)0.465 (3)0.5962 (17)0.040 (7)*
H5B0.458 (2)0.529 (3)0.6545 (16)0.037 (6)*
H3B0.542 (2)0.690 (3)0.8807 (18)0.035 (7)*
H11B0.535 (2)0.323 (3)0.4773 (17)0.032 (6)*
H2A0.616 (2)1.046 (3)0.5350 (17)0.043 (7)*
H2B0.720 (3)0.985 (3)0.5169 (18)0.045 (7)*
H510.925 (2)0.518 (3)0.6447 (18)0.049 (7)*
H210.901 (2)1.068 (3)0.6630 (17)0.049 (7)*
U11U22U33U12U13U23
Ba10.00723 (7)0.00479 (6)0.00797 (7)−0.00014 (3)0.00246 (4)−0.00034 (3)
O4W0.0108 (6)0.0094 (6)0.0149 (7)−0.0005 (5)0.0006 (5)0.0027 (4)
O10.0121 (5)0.0052 (5)0.0133 (6)−0.0007 (4)0.0048 (4)0.0005 (4)
C30.0077 (7)0.0086 (7)0.0062 (7)−0.0005 (6)−0.0015 (6)0.0002 (5)
O60.0091 (5)0.0085 (5)0.0124 (5)0.0008 (4)0.0046 (4)−0.0009 (4)
C40.0082 (7)0.0072 (7)0.0068 (7)−0.0008 (6)−0.0015 (6)0.0003 (6)
C10.0076 (7)0.0096 (8)0.0059 (7)0.0010 (6)−0.0008 (6)−0.0007 (6)
O3W0.0198 (6)0.0093 (6)0.0136 (6)−0.0004 (5)0.0085 (5)−0.0006 (5)
O20.0086 (5)0.0075 (5)0.0155 (6)0.0014 (4)0.0060 (4)−0.0002 (4)
O50.0095 (6)0.0067 (5)0.0187 (6)−0.0007 (4)0.0062 (5)0.0012 (4)
C20.0077 (8)0.0085 (7)0.0074 (8)−0.0004 (6)−0.0014 (6)−0.0004 (6)
O2W0.0157 (6)0.0129 (6)0.0186 (6)0.0038 (5)0.0078 (5)0.0049 (5)
O70.0114 (5)0.0084 (5)0.0126 (6)−0.0025 (4)0.0031 (4)−0.0007 (4)
O1W0.0251 (7)0.0096 (6)0.0128 (6)0.0018 (5)0.0088 (5)0.0011 (5)
O80.0091 (5)0.0096 (5)0.0154 (6)0.0011 (4)0.0053 (4)−0.0019 (4)
C70.0070 (7)0.0097 (7)0.0057 (7)−0.0003 (6)−0.0011 (6)0.0002 (6)
C50.0071 (7)0.0093 (8)0.0082 (7)0.0004 (6)−0.0010 (6)−0.0010 (6)
C60.0059 (7)0.0094 (7)0.0067 (7)−0.0007 (6)−0.0013 (6)0.0006 (6)
O30.0101 (5)0.0058 (5)0.0124 (5)−0.0004 (4)0.0033 (4)0.0003 (4)
C80.0083 (8)0.0081 (7)0.0082 (7)−0.0004 (6)−0.0020 (6)−0.0001 (6)
O40.0098 (5)0.0082 (5)0.0136 (6)0.0006 (4)0.0050 (4)−0.0010 (4)
O11W0.0085 (6)0.0140 (6)0.0125 (6)−0.0003 (5)0.0031 (5)0.0018 (5)
O5W0.0113 (6)0.0105 (6)0.0121 (6)−0.0010 (4)0.0049 (5)−0.0018 (4)
Ba1—O12.6857 (10)O3W—H3A0.85 (3)
Ba1—O3W2.7032 (12)O3W—H3B0.79 (3)
Ba1—O5W2.7358 (11)O2—C21.3058 (19)
Ba1—O1W2.7500 (12)O2—H210.85 (3)
Ba1—O2W2.7791 (12)O5—C51.3099 (19)
Ba1—O62.7851 (11)O5—H510.86 (3)
Ba1—O4W2.8356 (14)O2W—H2A0.77 (3)
Ba1—O3i2.7983 (10)O2W—H2B0.86 (3)
Ba1—O4ii2.9630 (11)O7—C71.2241 (18)
O3—Ba1iii2.7983 (10)O1W—H1B0.86 (3)
O4—Ba1iv2.9630 (11)O1W—H1A0.75 (3)
O4W—H4A0.77 (2)O8—C81.2351 (19)
O4W—H4B0.80 (3)C7—C61.491 (2)
O1—C11.2380 (18)C7—C81.497 (2)
C3—O31.2496 (18)C5—C61.438 (2)
C3—C21.436 (2)C5—C81.441 (2)
C3—C41.499 (2)O11W—H11A0.75 (2)
O6—C61.2557 (19)O11W—H11B0.85 (3)
C4—O41.2255 (19)O5W—H5A0.84 (3)
C4—C11.495 (2)O5W—H5B0.85 (3)
C1—C21.442 (2)
O1—Ba1—O3W84.89 (4)O3—C3—C4134.17 (14)
O1—Ba1—O5W139.52 (3)C2—C3—C489.30 (12)
O3W—Ba1—O5W72.64 (4)C6—O6—Ba1127.48 (9)
O1—Ba1—O1W138.85 (4)O4—C4—C1135.01 (14)
O3W—Ba1—O1W136.03 (4)O4—C4—C3136.55 (14)
O5W—Ba1—O1W68.66 (4)C1—C4—C388.42 (11)
O1—Ba1—O2W73.26 (3)O1—C1—C2135.70 (14)
O3W—Ba1—O2W142.17 (4)O1—C1—C4135.04 (14)
O5W—Ba1—O2W104.72 (4)C2—C1—C489.25 (12)
O1W—Ba1—O2W69.56 (4)Ba1—O3W—H3A114.0 (14)
O1—Ba1—O677.19 (3)Ba1—O3W—H3B137.3 (18)
O3W—Ba1—O6134.32 (3)H3A—O3W—H3B109 (2)
O5W—Ba1—O6141.71 (3)C2—O2—H21115.5 (17)
O1W—Ba1—O674.54 (3)C5—O5—H51116.6 (17)
O2W—Ba1—O670.83 (3)O2—C2—C3132.07 (14)
O1—Ba1—O3i137.07 (3)O2—C2—C1134.86 (14)
O3W—Ba1—O3i81.83 (3)C3—C2—C193.04 (12)
O5W—Ba1—O3i73.36 (3)Ba1—O2W—H2A137.9 (18)
O1W—Ba1—O3i67.90 (4)Ba1—O2W—H2B112.5 (17)
O2W—Ba1—O3i134.70 (3)H2A—O2W—H2B108 (2)
O6—Ba1—O3i83.50 (3)Ba1—O1W—H1B119.7 (15)
O1—Ba1—O4W68.80 (3)Ba1—O1W—H1A131 (2)
O3W—Ba1—O4W68.01 (4)H1B—O1W—H1A108 (2)
O5W—Ba1—O4W127.78 (3)O7—C7—C6135.31 (14)
O1W—Ba1—O4W123.32 (4)O7—C7—C8135.78 (14)
O2W—Ba1—O4W127.42 (4)C6—C7—C888.76 (11)
O6—Ba1—O4W66.36 (3)O5—C5—C6137.96 (14)
O3i—Ba1—O4W68.36 (3)O5—C5—C8128.76 (14)
O1—Ba1—O4ii73.80 (3)C6—C5—C893.13 (12)
O3W—Ba1—O4ii67.47 (3)O6—C6—C5136.74 (15)
O5W—Ba1—O4ii66.64 (3)O6—C6—C7133.99 (14)
O1W—Ba1—O4ii113.11 (3)C5—C6—C789.21 (12)
O2W—Ba1—O4ii76.82 (3)C3—O3—Ba1iii131.74 (9)
O6—Ba1—O4ii141.44 (3)O8—C8—C5135.85 (15)
O3i—Ba1—O4ii134.97 (3)O8—C8—C7135.24 (14)
O4W—Ba1—O4ii123.17 (3)C5—C8—C788.86 (11)
Ba1—O4W—H4A116.7 (16)C4—O4—Ba1iv131.52 (9)
Ba1—O4W—H4B113.6 (17)H11A—O11W—H11B103 (2)
H4A—O4W—H4B109 (3)Ba1—O5W—H5A127.3 (16)
C1—O1—Ba1134.44 (9)Ba1—O5W—H5B117.8 (16)
O3—C3—C2136.52 (14)H5A—O5W—H5B108 (2)
O3W—Ba1—O1—C1−176.77 (14)O3—C3—C2—C1178.50 (18)
O5W—Ba1—O1—C1−121.24 (13)C4—C3—C2—C1−0.12 (12)
O1W—Ba1—O1—C1−1.98 (16)O1—C1—C2—O2−0.4 (3)
O2W—Ba1—O1—C1−28.01 (13)C4—C1—C2—O2178.04 (18)
O6—Ba1—O1—C145.53 (13)O1—C1—C2—C3−178.29 (18)
O3i—Ba1—O1—C1111.03 (13)C4—C1—C2—C30.12 (12)
O4W—Ba1—O1—C1114.86 (14)Ba1—O6—C6—C5−27.9 (2)
O4ii—Ba1—O1—C1−108.77 (14)Ba1—O6—C6—C7155.81 (13)
O1—Ba1—O6—C6178.40 (12)O5—C5—C6—O6−3.4 (3)
O3W—Ba1—O6—C6108.87 (12)C8—C5—C6—O6−178.92 (18)
O5W—Ba1—O6—C6−15.47 (14)O5—C5—C6—C7173.96 (19)
O1W—Ba1—O6—C6−31.82 (11)C8—C5—C6—C7−1.56 (11)
O2W—Ba1—O6—C6−105.11 (12)O7—C7—C6—O63.1 (3)
O3i—Ba1—O6—C637.00 (12)C8—C7—C6—O6178.98 (17)
O4W—Ba1—O6—C6106.18 (12)O7—C7—C6—C5−174.39 (18)
O4ii—Ba1—O6—C6−139.67 (11)C8—C7—C6—C51.50 (11)
O3—C3—C4—O4−0.1 (3)C2—C3—O3—Ba1iii155.33 (14)
C2—C3—C4—O4178.63 (18)C4—C3—O3—Ba1iii−26.6 (2)
O3—C3—C4—C1−178.57 (17)O5—C5—C8—O83.0 (3)
C2—C3—C4—C10.12 (11)C6—C5—C8—O8179.15 (18)
Ba1—O1—C1—C2−38.1 (3)O5—C5—C8—C7−174.60 (16)
Ba1—O1—C1—C4144.19 (13)C6—C5—C8—C71.55 (11)
O4—C4—C1—O1−0.2 (3)O7—C7—C8—O8−3.3 (3)
C3—C4—C1—O1178.31 (17)C6—C7—C8—O8−179.12 (18)
O4—C4—C1—C2−178.67 (18)O7—C7—C8—C5174.36 (18)
C3—C4—C1—C2−0.12 (11)C6—C7—C8—C5−1.50 (11)
O3—C3—C2—O20.5 (3)C1—C4—O4—Ba1iv−43.2 (2)
C4—C3—C2—O2−178.13 (17)C3—C4—O4—Ba1iv138.94 (15)
D—H···AD—HH···AD···AD—H···A
O1W—H1A···O4Wv0.74 (3)2.13 (2)2.8448 (19)162 (3)
O1W—H1B···O8vi0.86 (3)1.93 (3)2.7854 (16)175 (2)
O2W—H2A···O11Wiii0.78 (3)2.22 (3)2.9431 (17)156 (2)
O2W—H2B···O7vii0.86 (3)1.98 (3)2.8451 (17)178 (3)
O3W—H3A···O4i0.85 (3)1.94 (3)2.7724 (16)165 (2)
O3W—H3B···O11Wiv0.79 (3)2.05 (2)2.8160 (17)165 (2)
O4W—H4A···O7viii0.77 (3)2.07 (3)2.7916 (16)156 (2)
O4W—H4B···O5ix0.80 (2)2.37 (3)3.1245 (17)156 (2)
O5W—H5A···O11W0.84 (3)1.96 (3)2.7941 (16)177 (3)
O5W—H5B···O1ii0.85 (2)1.87 (2)2.7176 (15)173 (3)
O11W—H11A···O8vi0.75 (2)1.93 (2)2.6730 (17)169 (2)
O11W—H11B···O5Wx0.85 (2)1.94 (3)2.7711 (16)165 (2)
O2—H21···O60.86 (3)1.77 (3)2.6207 (15)178 (2)
O5—H51···O3i0.87 (2)1.71 (2)2.5795 (15)176 (3)
Table 1

Selected bond lengths (Å)

Ba1—O12.6857 (10)
Ba1—O3W 2.7032 (12)
Ba1—O5W 2.7358 (11)
Ba1—O1W 2.7500 (12)
Ba1—O2W 2.7791 (12)
Ba1—O62.7851 (11)
Ba1—O4W 2.8356 (14)
Ba1—O3i 2.7983 (10)
Ba1—O4ii 2.9630 (11)

Symmetry codes: (i) ; (ii) .

Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O1W—H1A⋯O4W iii 0.74 (3)2.13 (2)2.8448 (19)162 (3)
O1W—H1B⋯O8iv 0.86 (3)1.93 (3)2.7854 (16)175 (2)
O2W—H2A⋯O11W v 0.78 (3)2.22 (3)2.9431 (17)156 (2)
O2W—H2B⋯O7vi 0.86 (3)1.98 (3)2.8451 (17)178 (3)
O3W—H3A⋯O4i 0.85 (3)1.94 (3)2.7724 (16)165 (2)
O3W—H3B⋯O11W vii 0.79 (3)2.05 (2)2.8160 (17)165 (2)
O4W—H4A⋯O7viii 0.77 (3)2.07 (3)2.7916 (16)156 (2)
O4W—H4B⋯O5ix 0.80 (2)2.37 (3)3.1245 (17)156 (2)
O5W—H5A⋯O11W 0.84 (3)1.96 (3)2.7941 (16)177 (3)
O5W—H5B⋯O1ii 0.85 (2)1.87 (2)2.7176 (15)173 (3)
O11W—H11A⋯O8iv 0.75 (2)1.93 (2)2.6730 (17)169 (2)
O11W—H11B⋯O5W x 0.85 (2)1.94 (3)2.7711 (16)165 (2)
O2—H21⋯O60.86 (3)1.77 (3)2.6207 (15)178 (2)
O5—H51⋯O3i 0.87 (2)1.71 (2)2.5795 (15)176 (3)

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) ; (vii) ; (viii) ; (ix) ; (x) .

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Journal:  Acta Crystallogr B       Date:  2001-07-25

3.  Bis(2,9-dimethyl-1,10-phenanthroline-kappa(2)N,N')copper(I) hydrogen squarate hemihydrate.

Authors:  Ibrahim Uçar; Ahmet Bulut; Orhan Büyükgüngör
Journal:  Acta Crystallogr C       Date:  2005-05-13       Impact factor: 1.172

4.  catena-Poly[[{bis-[tetra-aqua-(2-hy-droxy-3,4-dioxocyclo-but-1-en-1-olato-κO)bariumstrontium(0.35/0.65)]di-μ-aqua}-bis-(μ-2-hy-droxy-4-oxocyclo-but-1-ene-1,3-diolato-κO:O)] monohydrate].

Authors:  Chahrazed Trifa; Amira Bouhali; Sofiane Bouacida; Chaouki Boudaren; Thierry Bataille
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-01-29

5.  Poly[[μ-aqua-tetraaquabis(μ-2-hydroxy-4-oxocyclobut-1-ene-1,3-diolato)strontium] hemihydrate].

Authors:  Amira Bouhali; Chahrazed Trifa; Sofiane Bouacida; Chaouki Boudaren; Thierry Bataille
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-07-23
  5 in total

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