Literature DB >> 24040840

Terahertz vibrations of crystalline acyclic and cyclic diglycine: benchmarks for London force correction models.

Thomas R Juliano1, Timothy M Korter.   

Abstract

Terahertz spectroscopy provides direct information concerning weak intermolecular forces in crystalline molecular solids and therefore acts as an excellent method for calibrating and evaluating computational models for noncovalent interactions. In this study, the low-frequency vibrations of two dipeptides were compared, acyclic diglycine and cyclic diglycine, as benchmark systems for gauging the performance of semiempirical London force correction approaches. The diglycine samples were investigated using pulsed terahertz spectroscopy from 10 to 100 cm(-1) and then analyzed using solid-state density functional theory (DFT) augmented with existing London force corrections, as well as a new parametrization (DFT-DX) based on known experimental values. The two diglycine molecules provide a useful test for the applied models given their similarities, but more importantly the differences in the intermolecular forces displayed by each. It was found that all of the considered London force correction models were able to generate diglycine crystal structures of similar accuracy, but considerable variation occurred in their abilities to predict terahertz frequency vibrations. The DFT-DX parametrization was particularly successful in this investigation and shows promise for the improved analysis of low-frequency spectra.

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Year:  2013        PMID: 24040840     DOI: 10.1021/jp407112w

Source DB:  PubMed          Journal:  J Phys Chem A        ISSN: 1089-5639            Impact factor:   2.781


  4 in total

1.  Broadband terahertz recognizing conformational characteristics of a significant neurotransmitter γ-aminobutyric acid.

Authors:  Chao Cheng; Zhongjie Zhu; Shaoping Li; Guanhua Ren; Jianbing Zhang; Haixia Cong; Yan Peng; Jiaguang Han; Chao Chang; Hongwei Zhao
Journal:  RSC Adv       Date:  2019-06-28       Impact factor: 4.036

2.  PDielec: The calculation of infrared and terahertz absorption for powdered crystals.

Authors:  John Kendrick; Andrew D Burnett
Journal:  J Comput Chem       Date:  2016-04-13       Impact factor: 3.376

Review 3.  Periodic DFT Calculations-Review of Applications in the Pharmaceutical Sciences.

Authors:  Anna Helena Mazurek; Łukasz Szeleszczuk; Dariusz Maciej Pisklak
Journal:  Pharmaceutics       Date:  2020-05-01       Impact factor: 6.321

4.  Combined X-ray Crystallographic, IR/Raman Spectroscopic, and Periodic DFT Investigations of New Multicomponent Crystalline Forms of Anthelmintic Drugs: A Case Study of Carbendazim Maleate.

Authors:  Alexander P Voronin; Artem O Surov; Andrei V Churakov; Olga D Parashchuk; Alexey A Rykounov; Mikhail V Vener
Journal:  Molecules       Date:  2020-05-21       Impact factor: 4.411

  4 in total

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