Literature DB >> 24038851

Mechanochemical properties of individual human telomeric RNA (TERRA) G-quadruplexes.

Philip M Yangyuoru1, Amy Y Q Zhang, Zhe Shi, Deepak Koirala, Shankar Balasubramanian, Hanbin Mao.   

Abstract

Potential functions: By following the unfolding and refolding of individual human RNA telomeric (TERRA) G-quadruplexes (GQs) in laser tweezers, the mechanical stability and transition kinetics of RNA GQs are obtained. Comparison between TERRA and DNA GQs suggests their different regulatory capacities for processes associated with human telomeres.
Copyright © 2013 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  G-quadruplexes; RNA structures; TERRA; laser tweezers; mechanical stability; mechanochemistry; single molecules

Mesh：

Substances：

Year:  2013        PMID： 24038851     DOI： 10.1002/cbic.201300350

Source DB:  PubMed          Journal:  Chembiochem        ISSN： 1439-4227            Impact factor:   3.164


  10 in total

1.  Role of the central cations in the mechanical unfolding of DNA and RNA G-quadruplexes.

Authors:  Ana Elisa Bergues-Pupo; J Ricardo Arias-Gonzalez; María Carmen Morón; Alessandro Fiasconaro; Fernando Falo
Journal:  Nucleic Acids Res       Date:  2015-07-13       Impact factor: 16.971

2.  Molecular population dynamics of DNA structures in a bcl-2 promoter sequence is regulated by small molecules and the transcription factor hnRNP LL.

Authors:  Yunxi Cui; Deepak Koirala; HyunJin Kang; Soma Dhakal; Philip Yangyuoru; Laurence H Hurley; Hanbin Mao
Journal:  Nucleic Acids Res       Date:  2014-03-07       Impact factor: 16.971

3.  Nascent RNA transcripts facilitate the formation of G-quadruplexes.

Authors:  Prakash Shrestha; Shan Xiao; Soma Dhakal; Zheng Tan; Hanbin Mao
Journal:  Nucleic Acids Res       Date:  2014-05-14       Impact factor: 16.971

4.  RTEL1 influences the abundance and localization of TERRA RNA.

Authors:  Fiorella Ghisays; Aitor Garzia; Hexiao Wang; Claudia Canasto-Chibuque; Marcel Hohl; Sharon A Savage; Thomas Tuschl; John H J Petrini
Journal:  Nat Commun       Date:  2021-05-21       Impact factor: 14.919

Review 5.  Characterization of G-Quadruplexes Folding/Unfolding Dynamics and Interactions with Proteins from Single-Molecule Force Spectroscopy.

Authors:  Yuanlei Cheng; Yashuo Zhang; Huijuan You
Journal:  Biomolecules       Date:  2021-10-25

6.  Dual binding of an antibody and a small molecule increases the stability of TERRA G-quadruplex.

Authors:  Philip M Yangyuoru; Marco Di Antonio; Chiran Ghimire; Giulia Biffi; Shankar Balasubramanian; Hanbin Mao
Journal:  Angew Chem Int Ed Engl       Date:  2014-11-24       Impact factor: 15.336

7.  Dual Binding of an Antibody and a Small Molecule Increases the Stability of TERRA G-Quadruplex.

Authors:  Philip M Yangyuoru; Marco Di Antonio; Chiran Ghimire; Giulia Biffi; Shankar Balasubramanian; Hanbin Mao
Journal:  Angew Chem Weinheim Bergstr Ger       Date:  2014-11-24

8.  Mechanical insights into ribosomal progression overcoming RNA G-quadruplex from periodical translation suppression in cells.

Authors:  Tamaki Endoh; Naoki Sugimoto
Journal:  Sci Rep       Date:  2016-03-07       Impact factor: 4.379

9.  Directional mechanical stability of Bacteriophage φ29 motor's 3WJ-pRNA: Extraordinary robustness along portal axis.

Authors:  Zhonghe Xu; Yang Sun; Jeffrey K Weber; Yi Cao; Wei Wang; Daniel Jasinski; Peixuan Guo; Ruhong Zhou; Jingyuan Li
Journal:  Sci Adv       Date:  2017-05-26       Impact factor: 14.136

10.  Nanomechanics and co-transcriptional folding of Spinach and Mango.

Authors:  Jaba Mitra; Taekjip Ha
Journal:  Nat Commun       Date:  2019-09-20       Impact factor: 14.919
  10 in total

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