Literature DB >> 24035011

Reprogramming human fibroblasts to neurons by recapitulating an essential microRNA-chromatin switch.

Jiong Tang1, Andrew S Yoo, Gerald R Crabtree.   

Abstract

The development of the vertebrate nervous system requires a switch of ATP-dependent chromatin remodeling mechanisms, which occurs by substituting subunits within these complexes near cell cycle exit. This switching involves a triple negative genetic circuitry in which REST represses miR-9 and miR-124, which in turn repress BAF53a, which in turn repress the homologous neuron-specific BAF53b. Recapitulation of this microRNA/chromatin switch in human fibroblasts converts them to neurons. The genes involved in this fate-determining chromatin switch play genetically dominant roles in several human neurologic diseases suggesting that they are rate-limiting for aspects of human neural development. We review how this switch in ATP-dependent chromatin complexes might interface with traditional ideas about neural determination and reprogramming.
Copyright © 2013 Elsevier Ltd. All rights reserved.

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Year:  2013        PMID: 24035011      PMCID: PMC3951511          DOI: 10.1016/j.gde.2013.07.001

Source DB:  PubMed          Journal:  Curr Opin Genet Dev        ISSN: 0959-437X            Impact factor:   5.578


  47 in total

1.  Identification of a polymorphic, neuron-specific chromatin remodeling complex.

Authors:  Ivan Olave; Weidong Wang; Yutong Xue; Ann Kuo; Gerald R Crabtree
Journal:  Genes Dev       Date:  2002-10-01       Impact factor: 11.361

2.  Heterozygous missense mutations in SMARCA2 cause Nicolaides-Baraitser syndrome.

Authors:  Jeroen K J Van Houdt; Beata Anna Nowakowska; Sérgio B Sousa; Barbera D C van Schaik; Eve Seuntjens; Nelson Avonce; Alejandro Sifrim; Omar A Abdul-Rahman; Marie-José H van den Boogaard; Armand Bottani; Marco Castori; Valérie Cormier-Daire; Matthew A Deardorff; Isabel Filges; Alan Fryer; Jean-Pierre Fryns; Simone Gana; Livia Garavelli; Gabriele Gillessen-Kaesbach; Bryan D Hall; Denise Horn; Danny Huylebroeck; Jakub Klapecki; Malgorzata Krajewska-Walasek; Alma Kuechler; Matthew A Lines; Saskia Maas; Kay D Macdermot; Shane McKee; Alex Magee; Stella A de Man; Yves Moreau; Fanny Morice-Picard; Ewa Obersztyn; Jacek Pilch; Elizabeth Rosser; Nora Shannon; Irene Stolte-Dijkstra; Patrick Van Dijck; Catheline Vilain; Annick Vogels; Emma Wakeling; Dagmar Wieczorek; Louise Wilson; Orsetta Zuffardi; Antoine H C van Kampen; Koenraad Devriendt; Raoul Hennekam; Joris Robert Vermeesch
Journal:  Nat Genet       Date:  2012-02-26       Impact factor: 38.330

3.  Mutations affecting components of the SWI/SNF complex cause Coffin-Siris syndrome.

Authors:  Yoshinori Tsurusaki; Nobuhiko Okamoto; Hirofumi Ohashi; Tomoki Kosho; Yoko Imai; Yumiko Hibi-Ko; Tadashi Kaname; Kenji Naritomi; Hiroshi Kawame; Keiko Wakui; Yoshimitsu Fukushima; Tomomi Homma; Mitsuhiro Kato; Yoko Hiraki; Takanori Yamagata; Shoji Yano; Seiji Mizuno; Satoru Sakazume; Takuma Ishii; Toshiro Nagai; Masaaki Shiina; Kazuhiro Ogata; Tohru Ohta; Norio Niikawa; Satoko Miyatake; Ippei Okada; Takeshi Mizuguchi; Hiroshi Doi; Hirotomo Saitsu; Noriko Miyake; Naomichi Matsumoto
Journal:  Nat Genet       Date:  2012-03-18       Impact factor: 38.330

4.  Baf60c is a component of the neural progenitor-specific BAF complex in developing retina.

Authors:  Deepak A Lamba; Susan Hayes; Mike O Karl; Thomas Reh
Journal:  Dev Dyn       Date:  2008-10       Impact factor: 3.780

5.  MicroRNA-124 is a subventricular zone neuronal fate determinant.

Authors:  Malin Åkerblom; Rohit Sachdeva; Isabelle Barde; Sonia Verp; Bernhard Gentner; Didier Trono; Johan Jakobsson
Journal:  J Neurosci       Date:  2012-06-27       Impact factor: 6.167

6.  In vitro reprogramming of fibroblasts into a pluripotent ES-cell-like state.

Authors:  Marius Wernig; Alexander Meissner; Ruth Foreman; Tobias Brambrink; Manching Ku; Konrad Hochedlinger; Bradley E Bernstein; Rudolf Jaenisch
Journal:  Nature       Date:  2007-06-06       Impact factor: 49.962

7.  An essential switch in subunit composition of a chromatin remodeling complex during neural development.

Authors:  Julie Lessard; Jiang I Wu; Jeffrey A Ranish; Mimi Wan; Monte M Winslow; Brett T Staahl; Hai Wu; Ruedi Aebersold; Isabella A Graef; Gerald R Crabtree
Journal:  Neuron       Date:  2007-07-19       Impact factor: 17.173

8.  The chromatin remodeling factor Bap55 functions through the TIP60 complex to regulate olfactory projection neuron dendrite targeting.

Authors:  Joy S Tea; Liqun Luo
Journal:  Neural Dev       Date:  2011-02-01       Impact factor: 3.842

9.  Directed transdifferentiation of mouse mesoderm to heart tissue by defined factors.

Authors:  Jun K Takeuchi; Benoit G Bruneau
Journal:  Nature       Date:  2009-04-26       Impact factor: 49.962

10.  Fusion of SYT to two genes, SSX1 and SSX2, encoding proteins with homology to the Kruppel-associated box in human synovial sarcoma.

Authors:  A J Crew; J Clark; C Fisher; S Gill; R Grimer; A Chand; J Shipley; B A Gusterson; C S Cooper
Journal:  EMBO J       Date:  1995-05-15       Impact factor: 11.598

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  9 in total

1.  ONECUT transcription factors induce neuronal characteristics and remodel chromatin accessibility.

Authors:  Jori van der Raadt; Sebastianus H C van Gestel; Nael Nadif Kasri; Cornelis A Albers
Journal:  Nucleic Acids Res       Date:  2019-06-20       Impact factor: 16.971

Review 2.  Direct lineage reprogramming via pioneer factors; a detour through developmental gene regulatory networks.

Authors:  Samantha A Morris
Journal:  Development       Date:  2016-08-01       Impact factor: 6.868

3.  Inhibition of Notch signaling facilitates the differentiation of human-induced pluripotent stem cells into neural stem cells.

Authors:  Chun-Yuan Chen; Wei Liao; Yuan-Lei Lou; Qing Li; Bin Hu; Yang Wang; Zhi-Feng Deng
Journal:  Mol Cell Biochem       Date:  2014-06-28       Impact factor: 3.396

4.  Nuclear Localization of Huntingtin mRNA Is Specific to Cells of Neuronal Origin.

Authors:  Marie-Cécile Didiot; Chantal M Ferguson; Socheata Ly; Andrew H Coles; Abigail O Smith; Alicia A Bicknell; Lauren M Hall; Ellen Sapp; Dimas Echeverria; Athma A Pai; Marian DiFiglia; Melissa J Moore; Lawrence J Hayward; Neil Aronin; Anastasia Khvorova
Journal:  Cell Rep       Date:  2018-09-04       Impact factor: 9.423

Review 5.  The heterogeneity of prostate cancers lacking AR activity will require diverse treatment approaches.

Authors:  Mark P Labrecque; Joshi J Alumkal; Ilsa M Coleman; Peter S Nelson; Colm Morrissey
Journal:  Endocr Relat Cancer       Date:  2021-07-15       Impact factor: 5.900

6.  Frequent mutations in chromatin-remodelling genes in pulmonary carcinoids.

Authors:  Lynnette Fernandez-Cuesta; Martin Peifer; Xin Lu; Ruping Sun; Luka Ozretić; Danila Seidal; Thomas Zander; Frauke Leenders; Julie George; Christian Müller; Ilona Dahmen; Berit Pinther; Graziella Bosco; Kathryn Konrad; Janine Altmüller; Peter Nürnberg; Viktor Achter; Ulrich Lang; Peter M Schneider; Magdalena Bogus; Alex Soltermann; Odd Terje Brustugun; Åslaug Helland; Steinar Solberg; Marius Lund-Iversen; Sascha Ansén; Erich Stoelben; Gavin M Wright; Prudence Russell; Zoe Wainer; Benjamin Solomon; John K Field; Russell Hyde; Michael Pa Davies; Lukas C Heukamp; Iver Petersen; Sven Perner; Christine Lovly; Federico Cappuzzo; William D Travis; Jürgen Wolf; Martin Vingron; Elisabeth Brambilla; Stefan A Haas; Reinhard Buettner; Roman K Thomas
Journal:  Nat Commun       Date:  2014-03-27       Impact factor: 14.919

Review 7.  MiR-9 and the Midbrain-Hindbrain Boundary: A Showcase for the Limited Functional Conservation and Regulatory Complexity of MicroRNAs.

Authors:  A Alwin Prem Anand; Gonzalo Alvarez-Bolado; Andrea Wizenmann
Journal:  Front Cell Dev Biol       Date:  2020-11-23

Review 8.  The Role of Epigenetic Change in Therapy-Induced Neuroendocrine Prostate Cancer Lineage Plasticity.

Authors:  William K Storck; Allison M May; Thomas C Westbrook; Zhi Duan; Colm Morrissey; Joel A Yates; Joshi J Alumkal
Journal:  Front Endocrinol (Lausanne)       Date:  2022-07-14       Impact factor: 6.055

9.  miR-9 and miR-124 synergistically affect regulation of dendritic branching via the AKT/GSK3β pathway by targeting Rap2a.

Authors:  Qian Xue; Caiyong Yu; Yan Wang; Ling Liu; Kun Zhang; Chao Fang; Fangfang Liu; Ganlan Bian; Bing Song; Angang Yang; Gong Ju; Jian Wang
Journal:  Sci Rep       Date:  2016-05-25       Impact factor: 4.379

  9 in total

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