Literature DB >> 24034334

Structural analysis of RNA backbone using in-line probing.

Ali Nahvi1, Rachel Green.   

Abstract

To determine the secondary structure characteristics of nucleotides in an RNA polymer.
© 2013 Elsevier Inc. All rights reserved.

Keywords:  In vitro RNA transcription; In-line probing; Labeling RNA; Polyacrylamide gel electrophoresis (PAGE); Selective 2′-hydroxyl acetylation and primer extension (SHAPE)

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Year:  2013        PMID： 24034334     DOI： 10.1016/B978-0-12-420037-1.00022-1

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN： 0076-6879            Impact factor:   1.600


  3 in total

1.  Upstream Flanking Sequence Assists Folding of an RNA Thermometer.

Authors:  Elizabeth A Jolley; Kathryn M Bormes; Philip C Bevilacqua
Journal:  J Mol Biol       Date:  2022-08-08       Impact factor: 6.151

Review 2.  Computational modeling of RNA 3D structures, with the aid of experimental restraints.

Authors:  Marcin Magnus; Dorota Matelska; Grzegorz Lach; Grzegorz Chojnowski; Michal J Boniecki; Elzbieta Purta; Wayne Dawson; Stanislaw Dunin-Horkawicz; Janusz M Bujnicki
Journal:  RNA Biol       Date:  2014-04-23       Impact factor: 4.652

3.  Rsite: a computational method to identify the functional sites of noncoding RNAs.

Authors:  Pan Zeng; Jianwei Li; Wei Ma; Qinghua Cui
Journal:  Sci Rep       Date:  2015-03-17       Impact factor: 4.379
  3 in total

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