| Literature DB >> 24028131 |
Ana Elisa Bergues Pupo1, Fernando Falo, Alessandro Fiasconaro.
Abstract
We present a phenomenological dynamical model describing the force induced melting as responsible for the DNA overstretching transition. The denaturation mechanism is developed under the framework of the mesoscopic one-dimensional Peyrard-Bishop-Dauxois (PBD) picture which models the melting features of a polymer chain by means of a Morse potential and the stacking interaction. We find a good agreement with both the experimental overstretching curve and the asymmetric hysteretic properties with different simulation times. The comparison of the standard PBD model with a modification of the Morse potential which takes into account the interaction with the solvent has been also successfully investigated.Entities:
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Year: 2013 PMID: 24028131 DOI: 10.1063/1.4819263
Source DB: PubMed Journal: J Chem Phys ISSN: 0021-9606 Impact factor: 3.488