Literature DB >> 24028068

Reducing levels of toxic RNA with small molecules.

Leslie A Coonrod1, Masayuki Nakamori, Wenli Wang, Samuel Carrell, Cameron L Hilton, Micah J Bodner, Ruth B Siboni, Aaron G Docter, Michael M Haley, Charles A Thornton, J Andrew Berglund.   

Abstract

Myotonic dystrophy (DM) is one of the most common forms of muscular dystrophy. DM is an autosomal dominant disease caused by a toxic gain of function RNA. The toxic RNA is produced from expanded noncoding CTG/CCTG repeats, and these CUG/CCUG repeats sequester the Muscleblind-like (MBNL) family of RNA binding proteins. The MBNL proteins are regulators of alternative splicing, and their sequestration has been linked with mis-splicing events in DM. A previously reported screen for small molecules found that pentamidine was able to improve splicing defects associated with DM. Biochemical experiments and cell and mouse model studies of the disease indicate that pentamidine and related compounds may work through binding the CTG*CAG repeat DNA to inhibit transcription. Analysis of a series of methylene linker analogues of pentamidine revealed that heptamidine reverses splicing defects and rescues myotonia in a DM1 mouse model.

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Year:  2013        PMID: 24028068      PMCID: PMC4108295          DOI: 10.1021/cb400431f

Source DB:  PubMed          Journal:  ACS Chem Biol        ISSN: 1554-8929            Impact factor:   5.100


  57 in total

Review 1.  Microsatellites: genomic distribution, putative functions and mutational mechanisms: a review.

Authors:  You-Chun Li; Abraham B Korol; Tzion Fahima; Avigdor Beiles; Eviatar Nevo
Journal:  Mol Ecol       Date:  2002-12       Impact factor: 6.185

2.  Crystal structure of a pentamidine-oligonucleotide complex: implications for DNA-binding properties.

Authors:  K J Edwards; T C Jenkins; S Neidle
Journal:  Biochemistry       Date:  1992-08-11       Impact factor: 3.162

3.  AT selectivity and DNA minor groove binding: modelling, NMR and structural studies of the interactions of propamidine and pentamidine with d(CGCGAATTCGCG)2.

Authors:  T C Jenkins; A N Lane
Journal:  Biochim Biophys Acta       Date:  1997-02-07

4.  The search for structure-specific nucleic acid-interactive drugs: effects of compound structure on RNA versus DNA interaction strength.

Authors:  W D Wilson; L Ratmeyer; M Zhao; L Strekowski; D Boykin
Journal:  Biochemistry       Date:  1993-04-20       Impact factor: 3.162

5.  Analogues of 1,5-bis(4-amidinophenoxy)pentane (pentamidine) in the treatment of experimental Pneumocystis carinii pneumonia.

Authors:  R R Tidwell; S K Jones; J D Geratz; K A Ohemeng; M Cory; J E Hall
Journal:  J Med Chem       Date:  1990-04       Impact factor: 7.446

6.  Viral vector producing antisense RNA restores myotonic dystrophy myoblast functions.

Authors:  D Furling; G Doucet; M-A Langlois; L Timchenko; E Belanger; L Cossette; J Puymirat
Journal:  Gene Ther       Date:  2003-05       Impact factor: 5.250

7.  Muscleblind proteins regulate alternative splicing.

Authors:  Thai H Ho; Nicolas Charlet-B; Michael G Poulos; Gopal Singh; Maurice S Swanson; Thomas A Cooper
Journal:  EMBO J       Date:  2004-07-15       Impact factor: 11.598

8.  Myotonic dystrophy mutation: an unstable CTG repeat in the 3' untranslated region of the gene.

Authors:  M Mahadevan; C Tsilfidis; L Sabourin; G Shutler; C Amemiya; G Jansen; C Neville; M Narang; J Barceló; K O'Hoy
Journal:  Science       Date:  1992-03-06       Impact factor: 47.728

9.  A muscleblind knockout model for myotonic dystrophy.

Authors:  Rahul N Kanadia; Karen A Johnstone; Ami Mankodi; Codrin Lungu; Charles A Thornton; Douglas Esson; Adrian M Timmers; William W Hauswirth; Maurice S Swanson
Journal:  Science       Date:  2003-12-12       Impact factor: 47.728

10.  Expansion of an unstable DNA region and phenotypic variation in myotonic dystrophy.

Authors:  H G Harley; J D Brook; S A Rundle; S Crow; W Reardon; A J Buckler; P S Harper; D E Housman; D J Shaw
Journal:  Nature       Date:  1992-02-06       Impact factor: 49.962

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  44 in total

1.  Chronic exercise mitigates disease mechanisms and improves muscle function in myotonic dystrophy type 1 mice.

Authors:  Alexander Manta; Derek W Stouth; Donald Xhuti; Leon Chi; Irena A Rebalka; Jayne M Kalmar; Thomas J Hawke; Vladimir Ljubicic
Journal:  J Physiol       Date:  2019-01-30       Impact factor: 5.182

2.  Furamidine Rescues Myotonic Dystrophy Type I Associated Mis-Splicing through Multiple Mechanisms.

Authors:  Jana R Jenquin; Leslie A Coonrod; Quinn A Silverglate; Natalie A Pellitier; Melissa A Hale; Guangbin Xia; Masayuki Nakamori; J Andrew Berglund
Journal:  ACS Chem Biol       Date:  2018-08-27       Impact factor: 5.100

Review 3.  Myotonic dystrophy.

Authors:  Charles A Thornton
Journal:  Neurol Clin       Date:  2014-06-06       Impact factor: 3.806

4.  Development of novel macrocyclic small molecules that target CTG trinucleotide repeats.

Authors:  Julio F Serrano; JuYeon Lee; L Daniel Curet; Lauren D Hagler; Sarah E Bonson; Emma J Schuster; Steven C Zimmerman
Journal:  Bioorg Med Chem       Date:  2019-05-14       Impact factor: 3.641

5.  Intrinsically cell-penetrating multivalent and multitargeting ligands for myotonic dystrophy type 1.

Authors:  JuYeon Lee; Yugang Bai; Ullas V Chembazhi; Shaohong Peng; Kevin Yum; Long M Luu; Lauren D Hagler; Julio F Serrano; H Y Edwin Chan; Auinash Kalsotra; Steven C Zimmerman
Journal:  Proc Natl Acad Sci U S A       Date:  2019-04-11       Impact factor: 11.205

Review 6.  Structure based approaches for targeting non-coding RNAs with small molecules.

Authors:  Matthew D Shortridge; Gabriele Varani
Journal:  Curr Opin Struct Biol       Date:  2015-02-16       Impact factor: 6.809

7.  A CTG repeat-selective chemical screen identifies microtubule inhibitors as selective modulators of toxic CUG RNA levels.

Authors:  Kaalak Reddy; Jana R Jenquin; Ona L McConnell; John D Cleary; Jared I Richardson; Belinda S Pinto; Maja C Haerle; Elizabeth Delgado; Lori Planco; Masayuki Nakamori; Eric T Wang; J Andrew Berglund
Journal:  Proc Natl Acad Sci U S A       Date:  2019-09-30       Impact factor: 11.205

8.  Biological Efficacy and Toxicity of Diamidines in Myotonic Dystrophy Type 1 Models.

Authors:  Ruth B Siboni; Micah J Bodner; Muhammad M Khalifa; Aaron G Docter; Jessica Y Choi; Masayuki Nakamori; Michael M Haley; J Andrew Berglund
Journal:  J Med Chem       Date:  2015-07-21       Impact factor: 7.446

9.  Actinomycin D Specifically Reduces Expanded CUG Repeat RNA in Myotonic Dystrophy Models.

Authors:  Ruth B Siboni; Masayuki Nakamori; Stacey D Wagner; Adam J Struck; Leslie A Coonrod; Shanee A Harriott; Daniel M Cass; Matthew K Tanner; J Andrew Berglund
Journal:  Cell Rep       Date:  2015-12-10       Impact factor: 9.423

10.  Dmpk gene deletion or antisense knockdown does not compromise cardiac or skeletal muscle function in mice.

Authors:  Samuel T Carrell; Ellie M Carrell; David Auerbach; Sanjay K Pandey; C Frank Bennett; Robert T Dirksen; Charles A Thornton
Journal:  Hum Mol Genet       Date:  2016-08-13       Impact factor: 6.150

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