Literature DB >> 24025342

Validation of dilution of plasma samples with phosphate buffered saline to eliminate the problem of small volumes associated with children infected with HIV-1 for viral load testing using Cobas AmpliPrep/COBAS TaqMan HIV-1 test, version 2.0 (CAP CTM HIV v2.0).

Madisa Mine1, Tapologo Nkoane, Gaseene Sebetso, Bright Sakyi, Kgomotso Makhaola, Tendani Gaolathe.   

Abstract

The sample requirement of 1 mL for the Roche COBAS AmpliPrep/COBAS TaqMan HIV-1 test, version 2.0 (CAP CTM HIV v2.0) limits its utility in measuring plasma HIV-1 RNA levels for small volume samples from children infected with HIV-1. Viral load monitoring is the standard of care for HIV-1-infected patients on antiretroviral therapy in Botswana. The study aimed to validate the dilution of small volume samples with phosphate buffered saline (1× PBS) when quantifying HIV-1 RNA in patient plasma. HIV RNA concentrations were determined in undiluted and diluted pairs of samples comprising panels of quality assessment standards (n=52) as well as patient samples (n=325). There was strong correlation (R(2)) of 0.98 and 0.95 within the dynamic range of the CAP CTM HIV v2.0 test between undiluted and diluted samples from quality assessment standards and patients, respectively. The difference between viral load measurements of diluted and undiluted pairs of quality assessment standards and patient samples using the Altman-Bland test showed that the 95% limits of agreement were between -0.40 Log 10 and 0.49 Log 10. This difference was within the 0.5 Log 10 which is generally considered as normal assay variation of plasma RNA levels. Dilution of samples with 1× PBS produced comparable viral load measurements to undiluted samples.
Copyright © 2013 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  COBAS TaqMan HIV-1 test; Dilution; HIV-1 RNA; Viral load

Mesh:

Substances:

Year:  2013        PMID: 24025342     DOI: 10.1016/j.jviromet.2013.08.031

Source DB:  PubMed          Journal:  J Virol Methods        ISSN: 0166-0934            Impact factor:   2.014


  3 in total

1.  Effect of sample management on quantitative HIV-1 viral load measurement at Saint Paul's Hospital Millennium Medical College, Addis Ababa, Ethiopia.

Authors:  Gadissa Gutema; Habtyes Hailu; Belete W/Semeyat; Amelework Yilma; Saro Abdela; Eleni Kidane; Sisay Adane; Mengistu Yimer; Aster Tsegaye
Journal:  PLoS One       Date:  2022-06-14       Impact factor: 3.752

2.  Performance evaluation of the Aptima HIV-1 RNA Quant assay on the Panther system using the standard and dilution protocols.

Authors:  Rebecca Rossetti; Tara Smith; Wei Luo; Jennifer Taussig; Mariah Valentine-Graves; Patrick Sullivan; Jessica M Ingersoll; Colleen S Kraft; Steve Ethridge; Laura Wesolowski; Kevin P Delaney; S Michele Owen; Jeffrey A Johnson; Silvina Masciotra
Journal:  J Clin Virol       Date:  2020-06-01       Impact factor: 3.168

3.  Estimation of measurement error in plasma HIV-1 RNA assays near their limit of quantification.

Authors:  Viviane D Lima; Lu Wang; Chanson Brumme; Lang Wu; Julio S G Montaner; P Richard Harrigan
Journal:  PLoS One       Date:  2017-02-02       Impact factor: 3.240

  3 in total

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