Literature DB >> 2402488

TGA1a, a tobacco DNA-binding protein, increases the rate of preinitiation complex formation in a plant in vitro transcription system [corrected].

K Yamazaki1, F Katagiri, H Imaseki, N H Chua.   

Abstract

We describe here a plant in vitro transcription system for class II promoters using wheat germ extract. In this system transcription is stimulated by TGA1a, a tobacco DNA-binding protein, and the stimulation is dependent on the presence of its cognate binding site upstream of the TATA box. Titration experiments showed that transcription initiation is more sensitive than transcription elongation to low concentrations of sarkosyl (N-lauroylsarcosine). At 0.07% sarkosyl, the formation of initiated complex is inhibited but transcription elongation is not. Under these conditions, events associated with a single round of transcription can be studied. We demonstrate that the time required for completing transcription of a 380-base-pair template is about 10 min. Addition of TGA1a increases the number of preinitiation complexes by approximately 3-fold with no significant effect on the frequency of transcription initiation from a single complex or on the rate of RNA elongation. We anticipate that this in vitro system will be valuable for the elucidation of mechanisms that regulate transcription in plants.

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Year:  1990        PMID: 2402488      PMCID: PMC54677          DOI: 10.1073/pnas.87.18.7035

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  15 in total

1.  A new method for the large-scale purification of wheat germ DNA-dependent RNA polymerase II.

Authors:  J J Jendrisak; R R Burgess
Journal:  Biochemistry       Date:  1975-10-21       Impact factor: 3.162

Review 2.  Transcriptional regulation in mammalian cells by sequence-specific DNA binding proteins.

Authors:  P J Mitchell; R Tjian
Journal:  Science       Date:  1989-07-28       Impact factor: 47.728

3.  Separation and partial characterization of three functional steps in transcription initiation by human RNA polymerase II.

Authors:  D K Hawley; R G Roeder
Journal:  J Biol Chem       Date:  1985-07-05       Impact factor: 5.157

4.  Multiple cis regulatory elements for maximal expression of the cauliflower mosaic virus 35S promoter in transgenic plants.

Authors:  R X Fang; F Nagy; S Sivasubramaniam; N H Chua
Journal:  Plant Cell       Date:  1989-01       Impact factor: 11.277

Review 5.  How eukaryotic transcriptional activators work.

Authors:  M Ptashne
Journal:  Nature       Date:  1988-10-20       Impact factor: 49.962

6.  Factors involved in specific transcription by human RNA polymerase II: analysis by a rapid and quantitative in vitro assay.

Authors:  M Sawadogo; R G Roeder
Journal:  Proc Natl Acad Sci U S A       Date:  1985-07       Impact factor: 11.205

7.  Selective and accurate initiation of transcription at the Ad2 major late promotor in a soluble system dependent on purified RNA polymerase II and DNA.

Authors:  P A Weil; D S Luse; J Segall; R G Roeder
Journal:  Cell       Date:  1979-10       Impact factor: 41.582

8.  Multiplicity of the DNA-binding protein HBP-1 specific to the conserved hexameric sequence ACGTCA in various plant gene promoters.

Authors:  K Mikami; H Takase; T Tabata; M Iwabuchi
Journal:  FEBS Lett       Date:  1989-10-09       Impact factor: 4.124

9.  Two tobacco DNA-binding proteins with homology to the nuclear factor CREB.

Authors:  F Katagiri; E Lam; N H Chua
Journal:  Nature       Date:  1989-08-31       Impact factor: 49.962

10.  The CaMV 35S enhancer contains at least two domains which can confer different developmental and tissue-specific expression patterns.

Authors:  P N Benfey; L Ren; N H Chua
Journal:  EMBO J       Date:  1989-08       Impact factor: 11.598

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  22 in total

1.  DNA-binding properties, genomic organization and expression pattern of TGA6, a new member of the TGA family of bZIP transcription factors in Arabidopsis thaliana.

Authors:  C Xiang; Z Miao; E Lam
Journal:  Plant Mol Biol       Date:  1997-06       Impact factor: 4.076

2.  Analysis of Tat transactivation of human immunodeficiency virus transcription in vitro.

Authors:  C A Bohan; F Kashanchi; B Ensoli; L Buonaguro; K A Boris-Lawrie; J N Brady
Journal:  Gene Expr       Date:  1992

3.  Identification of a novel dimer stabilization region in a plant bZIP transcription activator.

Authors:  F Katagiri; K Seipel; N H Chua
Journal:  Mol Cell Biol       Date:  1992-11       Impact factor: 4.272

Review 4.  Transcriptional and post-transcriptional regulation of gene expression in plants.

Authors:  C Kuhlemeier
Journal:  Plant Mol Biol       Date:  1992-05       Impact factor: 4.076

5.  Construction of a novel RNA-transcript-trimming plasmid which can be used both in vitro in place of run-off and (G)-free transcriptions and in vivo as multi-sequences transcription vectors.

Authors:  K Taira; K Nakagawa; S Nishikawa; K Furukawa
Journal:  Nucleic Acids Res       Date:  1991-10-11       Impact factor: 16.971

6.  The tobacco transcription activator TGA1a binds to a sequence in the 5' upstream region of a gene encoding a TGA1a-related protein.

Authors:  H Fromm; F Katagiri; N H Chua
Journal:  Mol Gen Genet       Date:  1991-10

Review 7.  Coactivators and TAFs of transcription activation in wheat.

Authors:  K B Washburn; E A Davis; S Ackerman
Journal:  Plant Mol Biol       Date:  1997-12       Impact factor: 4.076

Review 8.  The effect of the unfolded protein response on the production of recombinant proteins in plants.

Authors:  David Rhys Thomas; Amanda Maree Walmsley
Journal:  Plant Cell Rep       Date:  2014-09-04       Impact factor: 4.570

9.  A 22-bp fragment of the pea lectin promoter containing essential TGAC-like motifs confers seed-specific gene expression.

Authors:  S de Pater; K Pham; N H Chua; J Memelink; J Kijne
Journal:  Plant Cell       Date:  1993-08       Impact factor: 11.277

10.  Identification of domains in an Arabidopsis acyl carrier protein gene promoter required for maximal organ-specific expression.

Authors:  S R Baerson; M G Vander Heiden; G K Lamppa
Journal:  Plant Mol Biol       Date:  1994-12       Impact factor: 4.076

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