| Literature DB >> 24021386 |
Charles E Robertson1, J Kirk Harris, Brandie D Wagner, David Granger, Kathy Browne, Beth Tatem, Leah M Feazel, Kristin Park, Norman R Pace, Daniel N Frank.
Abstract
Studies of the human microbiome, and microbial community ecology in general, have blossomed of late and are now a burgeoning source of exciting research findings. Along with the advent of next-generation sequencing platforms, which have dramatically increased the scope of microbiome-related projects, several high-performance sequence analysis pipelines (e.g. QIIME, MOTHUR, VAMPS) are now available to investigators for microbiome analysis. The subject of our manuscript, the graphical user interface-based Explicet software package, fills a previously unmet need for a robust, yet intuitive means of integrating the outputs of the software pipelines with user-specified metadata and then visualizing the combined data.Entities:
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Year: 2013 PMID: 24021386 PMCID: PMC3834795 DOI: 10.1093/bioinformatics/btt526
Source DB: PubMed Journal: Bioinformatics ISSN: 1367-4803 Impact factor: 6.937