Literature DB >> 24011945

Applying additive logistic regression to data derived from sensors monitoring behavioral and physiological characteristics of dairy cows to detect lameness.

C Kamphuis1, E Frank2, J K Burke3, G A Verkerk3, J G Jago3.   

Abstract

The hypothesis was that sensors currently available on farm that monitor behavioral and physiological characteristics have potential for the detection of lameness in dairy cows. This was tested by applying additive logistic regression to variables derived from sensor data. Data were collected between November 2010 and June 2012 on 5 commercial pasture-based dairy farms. Sensor data from weigh scales (liveweight), pedometers (activity), and milk meters (milking order, unadjusted and adjusted milk yield in the first 2 min of milking, total milk yield, and milking duration) were collected at every milking from 4,904 cows. Lameness events were recorded by farmers who were trained in detecting lameness before the study commenced. A total of 318 lameness events affecting 292 cows were available for statistical analyses. For each lameness event, the lame cow's sensor data for a time period of 14 d before observation date were randomly matched by farm and date to 10 healthy cows (i.e., cows that were not lame and had no other health event recorded for the matched time period). Sensor data relating to the 14-d time periods were used for developing univariable (using one source of sensor data) and multivariable (using multiple sources of sensor data) models. Model development involved the use of additive logistic regression by applying the LogitBoost algorithm with a regression tree as base learner. The model's output was a probability estimate for lameness, given the sensor data collected during the 14-d time period. Models were validated using leave-one-farm-out cross-validation and, as a result of this validation, each cow in the data set (318 lame and 3,180 nonlame cows) received a probability estimate for lameness. Based on the area under the curve (AUC), results indicated that univariable models had low predictive potential, with the highest AUC values found for liveweight (AUC=0.66), activity (AUC=0.60), and milking order (AUC=0.65). Combining these 3 sensors improved AUC to 0.74. Detection performance of this combined model varied between farms but it consistently and significantly outperformed univariable models across farms at a fixed specificity of 80%. Still, detection performance was not high enough to be implemented in practice on large, pasture-based dairy farms. Future research may improve performance by developing variables based on sensor data of liveweight, activity, and milking order, but that better describe changes in sensor data patterns when cows go lame.
Copyright © 2013 American Dairy Science Association. Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  dairy cow; data mining; lameness detection; sensor data

Mesh:

Year:  2013        PMID: 24011945     DOI: 10.3168/jds.2013-6993

Source DB:  PubMed          Journal:  J Dairy Sci        ISSN: 0022-0302            Impact factor:   4.034


  5 in total

Review 1.  Lameness Detection in Dairy Cows: Part 2. Use of Sensors to Automatically Register Changes in Locomotion or Behavior.

Authors:  Annelies Van Nuffel; Ingrid Zwertvaegher; Stephanie Van Weyenberg; Matti Pastell; Vivi M Thorup; Claudia Bahr; Bart Sonck; Wouter Saeys
Journal:  Animals (Basel)       Date:  2015-08-28       Impact factor: 2.752

2.  Using Sensor Data to Detect Lameness and Mastitis Treatment Events in Dairy Cows: A Comparison of Classification Models.

Authors:  Christian Post; Christian Rietz; Wolfgang Büscher; Ute Müller
Journal:  Sensors (Basel)       Date:  2020-07-10       Impact factor: 3.576

3.  Prediction of lameness using automatically recorded activity, behavior and production data in post-parturient Irish dairy cows.

Authors:  G M Borghart; L E O'Grady; J R Somers
Journal:  Ir Vet J       Date:  2021-02-06       Impact factor: 2.146

4.  Grazing Cow Behavior's Association with Mild and Moderate Lameness.

Authors:  Niall W O'Leary; Daire T Byrne; Pauline Garcia; Jessica Werner; Morgan Cabedoche; Laurence Shalloo
Journal:  Animals (Basel)       Date:  2020-04-11       Impact factor: 2.752

5.  Boosted trees to predict pneumonia, growth, and meat percentage of growing-finishing pigs1.

Authors:  Herman Mollenhorst; Bart J Ducro; Karel H De Greef; Ina Hulsegge; Claudia Kamphuis
Journal:  J Anim Sci       Date:  2019-10-03       Impact factor: 3.159

  5 in total

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